Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VCAM1

Gene Name Gene ID Reads Annotation
VCAM1 ENSGALG00000005257 102 vascular cell adhesion molecule 1, transcript variant X1











Genes with expression patterns similar to VCAM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VCAM1 ENSGALG00000005257 102 7 1.000 - 1.000 1.000 1.000 1.000 1.000 - - 1.000 vascular cell adhesion molecule 1, transcript variant X1
2. KCTD14 ENSGALG00000017266 31 1.677 - - 0.932 - - - - - - 0.745 potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
3. SCNN1A ENSGALG00000040424 61 1.595 - - - - - 0.719 - - - 0.876 sodium channel epithelial 1 alpha subunit [Source:NCBI gene;Acc:396050]
4. PABPC1L ENSGALG00000004123 2 1 - - 1.000 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
5. ENSGALG00000025781 ENSGALG00000025781 1 1 - - - - - - - - - 1.000
6. ENSGALG00000026370 ENSGALG00000026370 2 1 - - - - - - - - - 1.000
7. RNF165 ENSGALG00000031018 4 1 - - - - - - - - - 1.000 ring finger protein 165 [Source:HGNC Symbol;Acc:HGNC:31696]
8. RHCG ENSGALG00000006635 7 1 - - 1.000 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
9. CAPN3 ENSGALG00000009050 3 1 - - - - 1.000 - - - - - calpain 3 [Source:NCBI gene;Acc:423233]
10. GNG4 ENSGALG00000010986 23 1 - - - - - - 1.000 - - - G protein subunit gamma 4 [Source:HGNC Symbol;Acc:HGNC:4407]
11. LRRC1 ENSGALG00000016304 21 1 - - - - - - 1.000 - - - leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]
12. PDE1A ENSGALG00000008885 4 1 - - 1.000 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
13. LPHN3 LPHN3 41 1 - - - - - 1.000 - - - -
14. KCNH7 ENSGALG00000038543 20 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily H member 7 [Source:HGNC Symbol;Acc:HGNC:18863]
15. FAM196A 5 1 - - - - - - 1.000 - - - family with sequence similarity 196 member A, transcript variant X6
16. FGL2 ENSGALG00000008306 15 1 - - - - - - 1.000 - - - fibrinogen like 2 [Source:NCBI gene;Acc:768821]
17. RCBTB2 ENSGALG00000017000 3 1 - - - - - - 1.000 - - - RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]
18. AGRP ENSGALG00000002244 27 1 - - 1.000 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
19. DSE ENSGALG00000014963 70 1 - - - - - - 1.000 - - - dermatan sulfate epimerase, transcript variant X1
20. PLEKHG5 ENSGALG00000027476 42 1 - - - - - - - - - 1.000 pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
21. EPSTI1 ENSGALG00000016964 6 1 - - - - - - - - - 1.000 epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]
22. PRKD3 ENSGALG00000010612 2 1 - - - - - 1.000 - - - - protein kinase D3 [Source:HGNC Symbol;Acc:HGNC:9408]
23. APELA ENSGALG00000023444 3 1 - - - - - 1.000 - - - - apelin receptor early endogenous ligand [Source:NCBI gene;Acc:770154]
24. EPYC ENSGALG00000011269 17 1 - - - - - - 1.000 - - - epiphycan [Source:NCBI gene;Acc:417890]
25. HEMGN ENSGALG00000045740 8 1 - - - - 1.000 - - - - - hemogen, transcript variant X1
26. TMEM72 ENSGALG00000026808 5 1 - - - - - - 1.000 - - - transmembrane protein 72 [Source:HGNC Symbol;Acc:HGNC:31658]
27. CD109 ENSGALG00000015910 11 1 - - - - - - 1.000 - - - CD109 molecule [Source:HGNC Symbol;Acc:HGNC:21685]
28. ACER2 ENSGALG00000015081 18 1 - - - - - 1.000 - - - - alkaline ceramidase 2 [Source:HGNC Symbol;Acc:HGNC:23675]
29. ENSGALG00000026267 ENSGALG00000026267 1 1 - - - - - 1.000 - - - -
30. IL23R IL23R 25 1 - - - - - 1.000 - - - -
31. ALDH8A1 ENSGALG00000013969 8 1 - - - - - 1.000 - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
32. PALB2 ENSGALG00000006078 1549 1 - - - - - - 1.000 - - - partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]
33. TMEM181 ENSGALG00000013737 19 1 - - - - - - 1.000 - - - transmembrane protein 181 [Source:HGNC Symbol;Acc:HGNC:20958]
34. KY ENSGALG00000044975 1 1 - - - - - - - - - 1.000 kyphoscoliosis peptidase [Source:HGNC Symbol;Acc:HGNC:26576]
35. DOK4 ENSGALG00000001160 2 1 - - 1.000 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
36. CCDC181 ENSGALG00000015221 10 1 - - - - 1.000 - - - - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
37. TAPP2 TAPP2 2 1 - - 1.000 - - - - - - -
38. BRAF ENSGALG00000012865 2 1 - - - - 1.000 - - - - - B-Raf proto-oncogene, serine/threonine kinase [Source:NCBI gene;Acc:396239]
39. MYO1H ENSGALG00000005122 1 1 - - - - 1.000 - - - - - myosin IH [Source:HGNC Symbol;Acc:HGNC:13879]
40. HTR2A ENSGALG00000016992 73 1 - - - - - 1.000 - - - - Gallus gallus 5-hydroxytryptamine receptor 2A (HTR2A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318420]
41. PGAP1 ENSGALG00000030789 3 1 - - - - 1.000 - - - - - post-GPI attachment to proteins 1, transcript variant X3
42. ENSGALG00000009151 ENSGALG00000009151 6 1 - - - - - - 1.000 - - -
43. P2RY4 ENSGALG00000004346 11 1 - - - - - - - - - 1.000 pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
44. QRSL1 ENSGALG00000015338 16 1 - - - - - 1.000 - - - - QRSL1, glutaminyl-tRNA amidotransferase subunit A [Source:HGNC Symbol;Acc:HGNC:21020]
45. KDM1B ENSGALG00000012685 11 1 - - - - - 1.000 - - - - lysine demethylase 1B [Source:HGNC Symbol;Acc:HGNC:21577]
46. PINLYP ENSGALG00000026884 23 1 - - - - - - 1.000 - - - phospholipase A2 inhibitor and LY6/PLAUR domain containing
47. SLC6A9 ENSGALG00000010098 5 1 - - - - - 1.000 - - - - solute carrier family 6 member 9 [Source:NCBI gene;Acc:424576]
48. SVOP ENSGALG00000034278 27 1 - - - - 1.000 - - - - - SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
49. VEPH1 ENSGALG00000009682 51 1 - - - - - 1.000 - - - - ventricular zone expressed PH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25735]
50. TXLNB ENSGALG00000013822 1 1 - - - - 1.000 - - - - - taxilin beta [Source:NCBI gene;Acc:395515]
51. SK2 SK2 74 1 - - - - - 1.000 - - - -
52. TEKT5 ENSGALG00000007257 5 1 - - - - - - 1.000 - - - tektin 5 [Source:HGNC Symbol;Acc:HGNC:26554]
53. A4GNT ENSGALG00000006600 11 1 - - - - - - 1.000 - - - alpha-1,4-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:17968]
54. MRGBP ENSGALG00000005531 79 1 - - - - 1.000 - - - - - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
55. CCND2 ENSGALG00000017283 38 1 - - - - - - 1.000 - - - cyclin D2 [Source:NCBI gene;Acc:374047]
56. ENSGALG00000005148 ENSGALG00000005148 9 1 - - - - - - - - - 1.000
57. TMEM204 ENSGALG00000029047 8 1 - - - - - 1.000 - - - - transmembrane protein 204 [Source:HGNC Symbol;Acc:HGNC:14158]
58. ENSGALG00000000193 ENSGALG00000000193 19 1 - - - - 1.000 - - - - -
59. GABRG1 ENSGALG00000020143 5 1 - - 1.000 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
60. TSNARE1 ENSGALG00000037014 2 1 - - - - - - - - - 1.000 t-SNARE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26437]
61. PRKAA2 ENSGALG00000010826 2 1 - - - - - - 1.000 - - - protein kinase AMP-activated catalytic subunit alpha 2 [Source:NCBI gene;Acc:429110]
62. TRPV1 ENSGALG00000004649 17 1 - - - - - - - - - 1.000 transient receptor potential cation channel subfamily V member 1 [Source:NCBI gene;Acc:395259]
63. ENSGALG00000001404 ENSGALG00000001404 6 1 - - - - - - - - - 1.000
64. GIF ENSGALG00000031546 2 1 - - 1.000 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
65. DNAH5 ENSGALG00000012997 28 1 - - - - - - 1.000 - - - dynein axonemal heavy chain 5 [Source:HGNC Symbol;Acc:HGNC:2950]
66. ENSGALG00000001345 ENSGALG00000001345 5 1 - - - - - - - - - 1.000
67. SPATA1 ENSGALG00000008784 4 1 - - - - - - - - - 1.000 spermatogenesis associated 1 [Source:HGNC Symbol;Acc:HGNC:14682]
68. DLL4 ENSGALG00000008514 3 1 - - - - - - - - - 1.000 delta like canonical Notch ligand 4 [Source:HGNC Symbol;Acc:HGNC:2910]
69. ODF2L ENSGALG00000006804 10 1 - - - - - 1.000 - - - - outer dense fiber of sperm tails 2 like [Source:HGNC Symbol;Acc:HGNC:29225]
70. TUSC1 22 1 - - - - 1.000 - - - - - tumor suppressor candidate 1
71. ENSGALG00000026922 ENSGALG00000026922 3 1 - - - - - 1.000 - - - -
72. EFCAB11 ENSGALG00000020402 16 1 - - - - - 1.000 - - - - EF-hand calcium binding domain 11 [Source:HGNC Symbol;Acc:HGNC:20357]
73. ATXN1L ENSGALG00000028253 17 1 - - - - 1.000 - - - - - ataxin 1 like [Source:HGNC Symbol;Acc:HGNC:33279]
74. GPR183 ENSGALG00000016881 5 1 - - - - - 1.000 - - - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
75. MYRFL ENSGALG00000019352 2 1 - - 1.000 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
76. C11ORF61 C11ORF61 41 1 - - - - - - 1.000 - - -
77. EHF ENSGALG00000007817 11 1 - - - - - 1.000 - - - - ETS homologous factor [Source:NCBI gene;Acc:425791]
78. GPR85 ENSGALG00000009439 23 1 - - - - - - 1.000 - - - G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
79. TRIM27.1 ENSGALG00000030397 19 1 - - - - 1.000 - - - - - tripartite motif containing 27.1 [Source:NCBI gene;Acc:417042]
80. ENSGALG00000009969 ENSGALG00000009969 2 1 - - 1.000 - - - - - - -
81. LMOD1 ENSGALG00000028721 81 1 - - - - - 1.000 - - - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
82. ANKRD2 ENSGALG00000007539 13 1 - - - - 1.000 - - - - - ankyrin repeat domain 2 [Source:HGNC Symbol;Acc:HGNC:495]
83. CSF3R ENSGALG00000002112 2 1 - - 1.000 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
84. ENSGALG00000026135 ENSGALG00000026135 16 0.984 - - - - - 0.984 - - - -
85. STAB2 32 0.981 - - - - - 0.981 - - - - stabilin 2
86. RELN ENSGALG00000008193 43 0.981 - - - - 0.981 - - - - - reelin [Source:NCBI gene;Acc:427850]
87. ENSGALG00000005578 ENSGALG00000005578 16 0.979 - - - - - 0.979 - - - -
88. VEGFRKDRL ENSGALG00000007646 18 0.978 - - - - - 0.978 - - - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
89. ATP6AP2 ENSGALG00000016241 257 0.976 - - - - - 0.976 - - - - ATPase H+ transporting accessory protein 2 [Source:NCBI gene;Acc:418573]
90. FGD6 ENSGALG00000011342 34 0.972 - - - - - 0.972 - - - - FYVE, RhoGEF and PH domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21740]
91. LOC769668 ENSGALG00000021450 31 0.967 - - - - - - 0.967 - - - estradiol 17-beta-dehydrogenase 2-like
92. ENSGALG00000020877 ENSGALG00000020877 36 0.966 - - - - - 0.966 - - - -
93. C12orf29 ENSGALG00000011168 26 0.963 - - - - - 0.963 - - - - chromosome 12 open reading frame 29 [Source:HGNC Symbol;Acc:HGNC:25322]
94. CACNA1I ENSGALG00000035051 27 0.959 - - - - - 0.959 - - - - calcium voltage-gated channel subunit alpha1 I, transcript variant X3
95. CLDN10 ENSGALG00000019114 2 0.956 - - 0.956 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
96. TG ENSGALG00000039509 19 0.955 - - - - - - 0.955 - - - thyroglobulin [Source:HGNC Symbol;Acc:HGNC:11764]
97. MZB1 ENSGALG00000044427 6 0.954 - - 0.954 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
98. CD101 12 0.954 - - 0.954 - - - - - - - CD101 molecule, transcript variant X4
99. UPB1 ENSGALG00000006627 139 0.954 - - 0.954 - - - - - - - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
100. PCDH12 ENSGALG00000002544 36 0.953 - - 0.953 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]

There are 258 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA