Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VBP1

Gene Name Gene ID Reads Annotation
VBP1 VBP1 14482











Genes with expression patterns similar to VBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VBP1 VBP1 14482 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. TRIAP1 ENSGALG00000007199 4921 1.635 - - - - - - 0.813 0.822 - - TP53 regulated inhibitor of apoptosis 1 [Source:NCBI gene;Acc:416977]
3. RFC5 ENSGALG00000026517 26113 1.614 - - - - - - 0.899 0.715 - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
4. UBL3 ENSGALG00000017084 7417 1.605 - - - - - - 0.769 0.836 - - ubiquitin like 3 [Source:NCBI gene;Acc:418921]
5. NCDN ENSGALG00000002408 6180 1.588 - - - - - - 0.788 0.800 - - neurochondrin [Source:NCBI gene;Acc:419633]
6. GNL3 ENSGALG00000001613 10911 1.583 - - - - - - 0.742 0.841 - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
7. LOC776067 ENSGALG00000016808 9164 1.573 - - - - - - 0.783 0.790 - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
8. POLR1E ENSGALG00000005395 8953 1.559 - - - - - - 0.768 0.791 - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
9. NF2 ENSGALG00000008073 4597 1.558 - - - - - - 0.751 0.807 - - neurofibromin 2 [Source:NCBI gene;Acc:395158]
10. GPBP1 ENSGALG00000014724 5454 1.556 - - - - - - 0.778 0.778 - - GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:HGNC:29520]
11. SIVA1 ENSGALG00000011619 15130 1.555 - - - - - - 0.842 0.713 - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
12. ATG5 ENSGALG00000015387 7752 1.549 - - - - - - 0.765 0.784 - - autophagy related 5 [Source:NCBI gene;Acc:421784]
13. TMED7 ENSGALG00000028484 21008 1.539 - - - - - - 0.772 0.767 - - Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
14. RANGAP1 ENSGALG00000011966 20170 1.527 - - - - - - 0.821 0.706 - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
15. FAM160B1 ENSGALG00000031404 3153 1.525 - - - - - - 0.726 0.799 - - family with sequence similarity 160 member B1 [Source:HGNC Symbol;Acc:HGNC:29320]
16. CLIC4 ENSGALG00000001262 11497 1.521 - - - - - - 0.747 0.774 - - chloride intracellular channel 4 [Source:HGNC Symbol;Acc:HGNC:13518]
17. GOT1 ENSGALG00000007484 21664 1.504 - - - - - - 0.790 0.714 - - glutamic-oxaloacetic transaminase 1 [Source:NCBI gene;Acc:396261]
18. FNBP1L ENSGALG00000005850 9219 1.493 - - - - - - 0.761 0.732 - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
19. CIR1 ENSGALG00000014276 7189 1.485 - - - - - - 0.771 0.714 - - corepressor interacting with RBPJ, 1 [Source:NCBI gene;Acc:426529]
20. KIF3B ENSGALG00000006604 2968 1.47 - - - - - - 0.702 0.768 - - kinesin family member 3B [Source:NCBI gene;Acc:419284]
21. SLC35F6 ENSGALG00000016589 5172 1.467 - - - - - - 0.704 0.763 - - solute carrier family 35 member F6 [Source:HGNC Symbol;Acc:HGNC:26055]
22. POLR2K ENSGALG00000036019 8962 1.453 - - - - - - 0.700 0.753 - - RNA polymerase II subunit K [Source:HGNC Symbol;Acc:HGNC:9198]
23. TMEM55A 2902 1.446 - - - - - - 0.708 0.738 - - transmembrane protein 55A
24. LSM5 ENSGALG00000041625 22307 0.924 - - - - - - 0.924 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]
25. C1QBP ENSGALG00000001654 34814 0.911 - - - - - - 0.911 - - - complement C1q binding protein [Source:HGNC Symbol;Acc:HGNC:1243]
26. XRN2 ENSGALG00000008372 22164 0.909 - - - - - - 0.909 - - - 5'-3' exoribonuclease 2 [Source:NCBI gene;Acc:421236]
27. HERC2 ENSGALG00000016739 9900 0.907 - - - - - - 0.907 - - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
28. CNOT10 ENSGALG00000011494 2614 0.906 - - - - - - - 0.906 - - CCR4-NOT transcription complex subunit 10 [Source:NCBI gene;Acc:420669]
29. SPCS1 ENSGALG00000001655 7718 0.905 - - - - - - 0.905 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
30. PSMC3 ENSGALG00000008108 22922 0.903 - - - - - - 0.903 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
31. NDUFV2 ENSGALG00000036625 29234 0.9 - - - - - - 0.900 - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
32. NUP50 ENSGALG00000014222 11743 0.896 - - - - - - 0.896 - - - nucleoporin 50 [Source:NCBI gene;Acc:418240]
33. NOC4L ENSGALG00000002272 9644 0.892 - - - - - - 0.892 - - - nucleolar complex associated 4 homolog [Source:NCBI gene;Acc:416798]
34. GLRX3 ENSGALG00000010464 22578 0.892 - - - - - - 0.892 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
35. CDC45 ENSGALG00000001616 8432 0.891 - - - - - - 0.891 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
36. PSMB2 ENSGALG00000026421 51885 0.889 - - - - - - 0.889 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
37. CASK ENSGALG00000042400 8485 0.889 - - - - - - 0.889 - - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
38. TRAPPC2 ENSGALG00000016578 8749 0.888 - - - - - - 0.888 - - - trafficking protein particle complex 2 [Source:NCBI gene;Acc:418634]
39. TXNDC17 ENSGALG00000027950 45004 0.887 - - - - - - 0.887 - - - thioredoxin domain containing 17 [Source:HGNC Symbol;Acc:HGNC:28218]
40. MAP3K7 ENSGALG00000015596 15164 0.887 - - - - - - 0.887 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
41. YWHAZ ENSGALG00000031387 84985 0.884 - - - - - - 0.884 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
42. WDR43 ENSGALG00000032529 12235 0.883 - - - - - - 0.883 - - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
43. CCDC59 ENSGALG00000028648 9272 0.883 - - - - - - 0.883 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
44. RUVBL1 ENSGALG00000005931 9379 0.883 - - - - - - 0.883 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
45. TPRKB ENSGALG00000013018 8687 0.881 - - - - - - 0.881 - - - TP53RK binding protein [Source:HGNC Symbol;Acc:HGNC:24259]
46. ILF2 ENSGALG00000011570 23050 0.881 - - - - - - 0.881 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
47. CTCF 10811 0.881 - - - - - - 0.881 - - - CCCTC-binding factor, transcript variant X2
48. PIK3IP1 ENSGALG00000006942 8388 0.88 - - - - - - 0.880 - - - phosphoinositide-3-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:24942]
49. RPF2 ENSGALG00000037087 12788 0.879 - - - - - - 0.879 - - - ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
50. COMMD4 ENSGALG00000001572 31664 0.879 - - - - - - 0.879 - - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
51. EIF4A2 ENSGALG00000008684 58507 0.879 - - - - - - 0.879 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
52. NEK6 ENSGALG00000001118 20333 0.878 - - - - - - 0.878 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
53. NDUFA12 ENSGALG00000011325 19807 0.877 - - - - - - 0.877 - - - NADH:ubiquinone oxidoreductase subunit A12 [Source:NCBI gene;Acc:417907]
54. ASUN ASUN 17129 0.877 - - - - - - 0.877 - - -
55. PEF1 ENSGALG00000040519 8522 0.877 - - - - - - 0.877 - - - penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]
56. PPP1R2 ENSGALG00000029789 11594 0.875 - - - - - - 0.875 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
57. RPL35 ENSGALG00000035677 252113 0.874 - - - - - - 0.874 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
58. MZT1 ENSGALG00000016932 9269 0.874 - - - - - - 0.874 - - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
59. MCTS1 ENSGALG00000008517 27514 0.871 - - - - - - 0.871 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
60. PES1 ENSGALG00000007778 12248 0.871 - - - - - - 0.871 - - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
61. RBBP4 ENSGALG00000003522 72455 0.87 - - - - - - 0.870 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
62. DPYSL2 ENSGALG00000000227 9668 0.869 - - - - - - 0.869 - - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
63. SMC4 ENSGALG00000009553 15715 0.868 - - - - - - 0.868 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
64. RNPS1 ENSGALG00000009288 13588 0.868 - - - - - - 0.868 - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
65. CEP78 ENSGALG00000015179 5227 0.868 - - - - - - 0.868 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
66. NUPL1 NUPL1 8197 0.866 - - - - - - 0.866 - - -
67. CRLS1 ENSGALG00000009214 8652 0.865 - - - - - - 0.865 - - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
68. AP2A2 ENSGALG00000006799 13874 0.865 - - - - - - 0.865 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
69. RBP5 ENSGALG00000014662 31268 0.862 - - - - - - 0.862 - - - retinol binding protein 5 [Source:NCBI gene;Acc:418296]
70. TMEM70 ENSGALG00000033568 10720 0.862 - - - - - - 0.862 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]
71. PLRG1 ENSGALG00000009257 8613 0.862 - - - - - - 0.862 - - - pleiotropic regulator 1 [Source:HGNC Symbol;Acc:HGNC:9089]
72. LLPH ENSGALG00000019358 20976 0.862 - - - - - - 0.862 - - - LLP homolog, long-term synaptic facilitation [Source:NCBI gene;Acc:771027]
73. RANBP1 ENSGALG00000002107 17715 0.86 - - - - - - 0.860 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
74. SF3B3 ENSGALG00000002531 19397 0.859 - - - - - - 0.859 - - - splicing factor 3b subunit 3, transcript variant X2
75. BMS1 ENSGALG00000002624 8339 0.857 - - - - - - 0.857 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
76. SNRNP40 ENSGALG00000000615 32298 0.857 - - - - - - 0.857 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
77. SAR1B ENSGALG00000038753 6493 0.855 - - - - - - 0.855 - - - secretion associated Ras related GTPase 1B [Source:NCBI gene;Acc:416314]
78. MRPS30 ENSGALG00000014874 3416 0.855 - - - - - - 0.855 - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
79. UQCRC1 ENSGALG00000005789 23201 0.855 - - - - - - 0.855 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
80. KLHDC2 ENSGALG00000012244 12903 0.855 - - - - - - 0.855 - - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
81. DGCR2 ENSGALG00000005891 8405 0.855 - - - - - - 0.855 - - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
82. R3HDM1 ENSGALG00000012246 6580 0.855 - - - - - - 0.855 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
83. SNRNP27 ENSGALG00000013883 22212 0.854 - - - - - - 0.854 - - - small nuclear ribonucleoprotein U4/U6.U5 subunit 27 [Source:HGNC Symbol;Acc:HGNC:30240]
84. EIF2B3 ENSGALG00000010140 7992 0.853 - - - - - - 0.853 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
85. AN1ZNF5L ENSGALG00000014589 21148 0.853 - - - - - - 0.853 - - - AN1-type zinc finger protein 5-like, transcript variant X2
86. CSE1L ENSGALG00000004707 20653 0.852 - - - - - - 0.852 - - - chromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]
87. MRPL50 ENSGALG00000015543 11649 0.852 - - - - - - 0.852 - - - mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
88. ADSL ENSGALG00000012034 10280 0.852 - - - - - - 0.852 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
89. N4BP2 ENSGALG00000014281 3144 0.851 - - - - - - - 0.851 - - NEDD4 binding protein 2, transcript variant X6
90. KLHDC4 ENSGALG00000037315 9828 0.85 - - - - - - 0.850 - - - kelch domain containing 4 [Source:NCBI gene;Acc:415831]
91. MRPL54 ENSGALG00000027611 39450 0.85 - - - - - - 0.850 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
92. TMEM30A ENSGALG00000015904 8533 0.849 - - - - - - 0.849 - - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
93. RBMX ENSGALG00000006457 34009 0.849 - - - - - - 0.849 - - - RNA binding motif protein X-linked [Source:NCBI gene;Acc:422248]
94. MED17 ENSGALG00000017218 5821 0.849 - - - - - - 0.849 - - - mediator complex subunit 17 [Source:NCBI gene;Acc:419000]
95. ENSGALG00000017396 ENSGALG00000017396 9028 0.848 - - - - - - 0.848 - - -
96. ATG3 ENSGALG00000015204 11277 0.848 - - - - - - 0.848 - - - autophagy related 3 [Source:NCBI gene;Acc:418369]
97. RPS3A ENSGALG00000010077 292185 0.848 - - - - - - 0.848 - - - ribosomal protein S3A [Source:NCBI gene;Acc:422477]
98. TMEM167A ENSGALG00000027332 13862 0.848 - - - - - - 0.848 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
99. RBM7 ENSGALG00000007017 8779 0.847 - - - - - - 0.847 - - - RNA binding motif protein 7 [Source:NCBI gene;Acc:419760]
100. C11H16ORF80 C11H16ORF80 18673 0.847 - - - - - - 0.847 - - -

There are 930 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA