Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VAMP4

Gene Name Gene ID Reads Annotation
VAMP4 ENSGALG00000031381 4289 vesicle associated membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:12645]











Genes with expression patterns similar to VAMP4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VAMP4 ENSGALG00000031381 4289 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle associated membrane protein 4 [Source:HGNC Symbol;Acc:HGNC:12645]
2. B3GALTL B3GALTL 4128 1.543 - - 0.809 - - - 0.734 - - -
3. TRUB2 ENSGALG00000004920 5425 1.521 - - - - - 0.761 - 0.760 - - TruB pseudouridine synthase family member 2 [Source:HGNC Symbol;Acc:HGNC:17170]
4. MBIP ENSGALG00000010096 2476 1.499 - - 0.770 - - - - 0.729 - - MAP3K12 binding inhibitory protein 1 [Source:HGNC Symbol;Acc:HGNC:20427]
5. FRMD3 ENSGALG00000012577 999 1.494 - - 0.728 - - 0.766 - - - - FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
6. TGIF1 ENSGALG00000014795 2378 1.45 - - 0.749 - - - - 0.701 - - TGFB induced factor homeobox 1 [Source:NCBI gene;Acc:396339]
7. STRN3 ENSGALG00000040464 9045 1.417 - - 0.715 - - - - 0.702 - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
8. GNS ENSGALG00000009856 3045 1.416 - - 0.712 - - - - 0.704 - - glucosamine (N-acetyl)-6-sulfatase [Source:NCBI gene;Acc:417829]
9. FOXM1 ENSGALG00000013420 2274 0.869 - - 0.869 - - - - - - - forkhead box M1 [Source:NCBI gene;Acc:430534]
10. U4 U4 69 0.847 - - - - - 0.847 - - - -
11. IBTK ENSGALG00000015864 3154 0.839 - - 0.839 - - - - - - - inhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]
12. BTAF1 ENSGALG00000030598 3556 0.838 - - 0.838 - - - - - - - B-TFIID TATA-box binding protein associated factor 1 [Source:HGNC Symbol;Acc:HGNC:17307]
13. BRWD1 ENSGALG00000016065 3321 0.833 - - 0.833 - - - - - - - bromodomain and WD repeat domain containing 1 [Source:HGNC Symbol;Acc:HGNC:12760]
14. NDUFAF2 ENSGALG00000027564 7302 0.831 - - 0.831 - - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
15. RNPS1 ENSGALG00000009288 13588 0.828 - - 0.828 - - - - - - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
16. FURIN ENSGALG00000008341 2609 0.828 - - 0.828 - - - - - - - furin, paired basic amino acid cleaving enzyme [Source:NCBI gene;Acc:395457]
17. FANCL ENSGALG00000030022 7423 0.828 - - - - - - - 0.828 - - FA complementation group L [Source:NCBI gene;Acc:421202]
18. MAK16 ENSGALG00000001663 7455 0.827 - - 0.827 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
19. CXorf30 CXorf30 172 0.826 - - 0.826 - - - - - - -
20. USP15 ENSGALG00000030024 2761 0.825 - - 0.825 - - - - - - - ubiquitin specific peptidase 15 [Source:NCBI gene;Acc:395644]
21. GBAS 18453 0.825 - - 0.825 - - - - - - - glioblastoma amplified sequence
22. LZIC ENSGALG00000002616 9052 0.82 - - 0.820 - - - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
23. C11ORF61 C11ORF61 41 0.818 - - - - - 0.818 - - - -
24. OSGEPL1 ENSGALG00000037727 1879 0.812 - - 0.812 - - - - - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]
25. BMP4 ENSGALG00000012429 4306 0.812 - - 0.812 - - - - - - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
26. OCIAD1 ENSGALG00000014081 12065 0.81 - - - - - - 0.810 - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
27. FLRT2 ENSGALG00000010589 490 0.81 - - - - - 0.810 - - - - fibronectin leucine rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3761]
28. ALDH7A1 ENSGALG00000008229 5891 0.805 - - 0.805 - - - - - - - aldehyde dehydrogenase 7 family member A1 [Source:HGNC Symbol;Acc:HGNC:877]
29. CERK ENSGALG00000019397 4511 0.803 - - - - - - - 0.803 - - ceramide kinase [Source:NCBI gene;Acc:425523]
30. FTSJ2 FTSJ2 2951 0.802 - - 0.802 - - - - - - -
31. KLF4 ENSGALG00000026928 184 0.8 - - - - - 0.800 - - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
32. C19H17ORF85 C19H17ORF85 2538 0.799 - - 0.799 - - - - - - -
33. ATP2B4 ENSGALG00000003601 3746 0.798 - - 0.798 - - - - - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
34. TMEM214 ENSGALG00000022850 7943 0.798 - - 0.798 - - - - - - - transmembrane protein 214 [Source:HGNC Symbol;Acc:HGNC:25983]
35. NUDT7 ENSGALG00000034395 7396 0.797 - - - - - - - 0.797 - - nudix hydrolase 7 [Source:NCBI gene;Acc:415800]
36. SPTY2D1 ENSGALG00000006355 994 0.797 - - 0.797 - - - - - - - SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
37. ENTPD5 ENSGALG00000010202 69 0.796 - - 0.796 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
38. VRTN ENSGALG00000010232 692 0.794 - - 0.794 - - - - - - - vertebrae development associated [Source:HGNC Symbol;Acc:HGNC:20223]
39. GCSH ENSGALG00000032679 29231 0.791 - - - - - - - 0.791 - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
40. LATS1 ENSGALG00000012386 3455 0.788 - - 0.788 - - - - - - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
41. PKP4 ENSGALG00000012561 3087 0.788 - - 0.788 - - - - - - - plakophilin 4 [Source:NCBI gene;Acc:424328]
42. SEMA3C ENSGALG00000040444 5404 0.787 - - 0.787 - - - - - - - semaphorin 3C [Source:NCBI gene;Acc:374090]
43. PXDN ENSGALG00000016377 4255 0.787 - - 0.787 - - - - - - - peroxidasin [Source:HGNC Symbol;Acc:HGNC:14966]
44. WDR11 ENSGALG00000035013 3393 0.786 - - 0.786 - - - - - - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
45. C8H1ORF52 C8H1ORF52 118 0.786 - - 0.786 - - - - - - -
46. ENSGALG00000026628 ENSGALG00000026628 1395 0.786 - - 0.786 - - - - - - -
47. PHIP ENSGALG00000015889 2348 0.785 - - 0.785 - - - - - - - pleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]
48. FUBP1 ENSGALG00000008939 2850 0.785 - - 0.785 - - - - - - - far upstream element binding protein 1 [Source:NCBI gene;Acc:424551]
49. NAA16 ENSGALG00000032808 3366 0.784 - - 0.784 - - - - - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
50. LRR1 ENSGALG00000012230 1062 0.784 - - 0.784 - - - - - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
51. NFYA ENSGALG00000003247 1894 0.784 - - - - - 0.784 - - - - nuclear transcription factor Y subunit alpha [Source:NCBI gene;Acc:419917]
52. ORC4 ENSGALG00000012448 8405 0.784 - - - - - - - 0.784 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
53. Sep-02 Sep-02 206 0.784 - - 0.784 - - - - - - -
54. TRIM37 ENSGALG00000005084 4036 0.784 - - 0.784 - - - - - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
55. DECR1 ENSGALG00000036990 6360 0.784 - - 0.784 - - - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
56. ATAD5 ENSGALG00000003294 4830 0.783 - - - - - - - 0.783 - - ATPase family, AAA domain containing 5 [Source:NCBI gene;Acc:417408]
57. FAM134A 1600 0.782 - - 0.782 - - - - - - - family with sequence similarity 134 member A
58. TAF3 ENSGALG00000006731 15569 0.782 - - - - - - 0.782 - - - TATA-box binding protein associated factor 3 [Source:NCBI gene;Acc:419107]
59. PEMT ENSGALG00000004875 4094 0.781 - - - - - - - 0.781 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
60. ZNF503 ENSGALG00000041935 2895 0.78 - - 0.780 - - - - - - - zinc finger protein 503 [Source:HGNC Symbol;Acc:HGNC:23589]
61. TRIM45 ENSGALG00000014818 1258 0.779 - - 0.779 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
62. PFKFB3 ENSGALG00000040369 2119 0.779 - - 0.779 - - - - - - - 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:HGNC Symbol;Acc:HGNC:8874]
63. C1orf222 C1orf222 61 0.779 - - - - - 0.779 - - - -
64. ISCU ENSGALG00000004869 6852 0.778 - - 0.778 - - - - - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
65. PTPN5 ENSGALG00000006368 440 0.778 - - 0.778 - - - - - - - protein tyrosine phosphatase, non-receptor type 5 [Source:HGNC Symbol;Acc:HGNC:9657]
66. MYO5C ENSGALG00000033198 36 0.778 - - - - - 0.778 - - - - myosin VC [Source:HGNC Symbol;Acc:HGNC:7604]
67. TSGA10 ENSGALG00000016757 4 0.778 - - - - - 0.778 - - - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
68. KIAA2013 ENSGALG00000004533 8 0.778 - - - - - 0.778 - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
69. ENSGALG00000022892 ENSGALG00000022892 3 0.778 - - - - - 0.778 - - - -
70. OMG ENSGALG00000005594 3 0.778 - - - - - 0.778 - - - - oligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]
71. CASP10 ENSGALG00000046494 2 0.778 - - - - - 0.778 - - - - caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]
72. ENSGALG00000027565 ENSGALG00000027565 2 0.778 - - - - - 0.778 - - - -
73. PCGF2 ENSGALG00000018815 38 0.778 - - - - - 0.778 - - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
74. IVD ENSGALG00000040267 5820 0.778 - - 0.778 - - - - - - - isovaleryl-CoA dehydrogenase [Source:NCBI gene;Acc:423011]
75. B3GALT1 ENSGALG00000010931 6 0.778 - - - - - 0.778 - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
76. RGS13 ENSGALG00000026810 8 0.778 - - - - - 0.778 - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
77. PROZ ENSGALG00000016832 6 0.778 - - - - - 0.778 - - - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
78. PCBP3 ENSGALG00000004394 5 0.778 - - - - - 0.778 - - - - poly(rC) binding protein 3, transcript variant X32
79. ITK ENSGALG00000003857 1 0.778 - - - - - 0.778 - - - - IL2 inducible T cell kinase [Source:HGNC Symbol;Acc:HGNC:6171]
80. PARM1 ENSGALG00000010268 13 0.778 - - - - - 0.778 - - - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
81. ENSGALG00000021716 ENSGALG00000021716 5 0.778 - - - - - 0.778 - - - -
82. KIAA1024L ENSGALG00000027692 20 0.778 - - - - - 0.778 - - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
83. ENSGALG00000019491 ENSGALG00000019491 1 0.778 - - - - - 0.778 - - - -
84. MATK ENSGALG00000000736 4 0.778 - - - - - 0.778 - - - - megakaryocyte-associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6906]
85. TRIP12 ENSGALG00000002929 11713 0.777 - - 0.777 - - - - - - - thyroid hormone receptor interactor 12 [Source:HGNC Symbol;Acc:HGNC:12306]
86. GOLGA3 ENSGALG00000002158 1342 0.777 - - 0.777 - - - - - - - golgin A3 [Source:HGNC Symbol;Acc:HGNC:4426]
87. PLEKHG5 ENSGALG00000027476 42 0.776 - - 0.776 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
88. CCT7 ENSGALG00000016088 2824 0.775 - - 0.775 - - - - - - - chaperonin containing TCP1 subunit 7 [Source:NCBI gene;Acc:428806]
89. TMEM45BL ENSGALG00000024296 5 0.775 - - - - - 0.775 - - - - transmembrane protein 45B-like
90. FBXL17 ENSGALG00000000276 2443 0.774 - - 0.774 - - - - - - - F-box and leucine rich repeat protein 17 [Source:HGNC Symbol;Acc:HGNC:13615]
91. DCTD ENSGALG00000010674 8396 0.774 - - - - - - - 0.774 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
92. SEC62 ENSGALG00000009379 15745 0.773 - - - - - - - 0.773 - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
93. POMC ENSGALG00000016600 99 0.773 - - 0.773 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
94. RHOC ENSGALG00000001569 53 0.773 - - 0.773 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
95. AP1S3 ENSGALG00000005171 2981 0.772 - - - - - - - 0.772 - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
96. WDR89 ENSGALG00000011827 1481 0.771 - - 0.771 - - - - - - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
97. GRIK3 ENSGALG00000002098 111 0.771 - - 0.771 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
98. KIAA0195 KIAA0195 48 0.771 - - 0.771 - - - - - - -
99. PON2 ENSGALG00000009689 1416 0.771 - - 0.771 - - - - - - - paraoxonase 2 [Source:NCBI gene;Acc:395830]
100. PBK ENSGALG00000016582 50 0.77 - - - - - 0.770 - - - - PDZ binding kinase [Source:NCBI gene;Acc:422003]

There are 293 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA