Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VAMP3

Gene Name Gene ID Reads Annotation
VAMP3 ENSGALG00000000579 720 vesicle-associated membrane protein 3 [Source:NCBI gene;Acc:419368]











Genes with expression patterns similar to VAMP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VAMP3 ENSGALG00000000579 720 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vesicle-associated membrane protein 3 [Source:NCBI gene;Acc:419368]
2. FAM35A 1187 0.864 - - - - - - - - 0.864 - family with sequence similarity 35 member A
3. GABRA1 ENSGALG00000001698 120 0.86 - - 0.860 - - - - - - - gamma-aminobutyric acid type A receptor alpha1 subunit [Source:NCBI gene;Acc:374214]
4. RAB11FIP1 41 0.833 - - 0.833 - - - - - - - RAB11 family interacting protein 1, transcript variant X2
5. ENSGALG00000005723 ENSGALG00000005723 36 0.833 - - 0.833 - - - - - - -
6. OTOA ENSGALG00000007070 94 0.833 - - 0.833 - - - - - - - otoancorin [Source:HGNC Symbol;Acc:HGNC:16378]
7. STXBP1 ENSGALG00000040003 157 0.832 - - 0.832 - - - - - - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
8. NUDT4 ENSGALG00000011285 2998 0.83 - - 0.830 - - - - - - - nudix hydrolase 4, transcript variant X5
9. C15orf60 C15orf60 16 0.828 - - 0.828 - - - - - - -
10. KPNA5 ENSGALG00000014937 28 0.828 - - 0.828 - - - - - - - karyopherin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6398]
11. SCNM1 ENSGALG00000046607 665 0.828 - - 0.828 - - - - - - - sodium channel modifier 1 [Source:HGNC Symbol;Acc:HGNC:23136]
12. ZZEF1 ENSGALG00000001546 767 0.826 - - 0.826 - - - - - - - zinc finger ZZ-type and EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29027]
13. TTLL12 ENSGALG00000014167 714 0.822 - - - - - - - - 0.822 - tubulin tyrosine ligase like 12 [Source:NCBI gene;Acc:418227]
14. SEC22C ENSGALG00000005268 1151 0.822 - - 0.822 - - - - - - - SEC22 homolog C, vesicle trafficking protein [Source:HGNC Symbol;Acc:HGNC:16828]
15. FMN2 ENSGALG00000031427 77 0.821 - - 0.821 - - - - - - - formin 2 [Source:HGNC Symbol;Acc:HGNC:14074]
16. GALNT11 ENSGALG00000006233 210 0.82 - - 0.820 - - - - - - - polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]
17. PHTF2 ENSGALG00000008335 722 0.818 - - 0.818 - - - - - - - putative homeodomain transcription factor 2 [Source:NCBI gene;Acc:417728]
18. gga-mir-6561 ENSGALG00000026650 135 0.816 - - 0.816 - - - - - - - gga-mir-6561 [Source:miRBase;Acc:MI0022379]
19. BICD1 ENSGALG00000012934 112 0.816 - - - - - - - - 0.816 - BICD cargo adaptor 1 [Source:HGNC Symbol;Acc:HGNC:1049]
20. RUVBL1 ENSGALG00000005931 9379 0.812 - - - - - - - - 0.812 - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
21. EPHA1 ENSGALG00000014687 174 0.811 - - 0.811 - - - - - - - EPH receptor A1 [Source:NCBI gene;Acc:378782]
22. CD300A CD300A 173 0.811 - - 0.811 - - - - - - -
23. PLXNB2 ENSGALG00000039861 338 0.811 - - 0.811 - - - - - - - plexin B2 [Source:HGNC Symbol;Acc:HGNC:9104]
24. TBC1D8B ENSGALG00000009040 75 0.81 - - 0.810 - - - - - - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
25. EML5 ENSGALG00000010639 25 0.81 - - 0.810 - - - - - - - echinoderm microtubule associated protein like 5, transcript variant X1
26. AHR2 ENSGALG00000023742 21 0.808 - - 0.808 - - - - - - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
27. LLGL1 ENSGALG00000014408 15 0.807 - - 0.807 - - - - - - - LLGL1, scribble cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:6628]
28. SLC37A2 ENSGALG00000035842 1183 0.807 - - - - - - - - - 0.807 solute carrier family 37 member 2 [Source:HGNC Symbol;Acc:HGNC:20644]
29. ATXN3 ENSGALG00000010766 48 0.806 - - 0.806 - - - - - - - ataxin 3 [Source:NCBI gene;Acc:378424]
30. BMP2K ENSGALG00000010885 37 0.806 - - 0.806 - - - - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
31. DNALI1 ENSGALG00000001996 64 0.805 - - 0.805 - - - - - - - dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]
32. FSCN2 ENSGALG00000023354 13 0.804 - - 0.804 - - - - - - - fascin actin-bundling protein 2, retinal [Source:NCBI gene;Acc:429198]
33. NRXN1 ENSGALG00000009107 277 0.802 - - 0.802 - - - - - - - neurexin 1 [Source:NCBI gene;Acc:395398]
34. FAM199X ENSGALG00000008872 44 0.802 - - 0.802 - - - - - - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
35. TOX3 ENSGALG00000034649 54 0.802 - - 0.802 - - - - - - - TOX high mobility group box family member 3 [Source:NCBI gene;Acc:415724]
36. PRC1 ENSGALG00000012836 20 0.8 - - 0.800 - - - - - - - protein regulator of cytokinesis 1 [Source:NCBI gene;Acc:770336]
37. CARD8 ENSGALG00000007698 45 0.8 - - - - - - - - - 0.800 caspase recruitment domain family, member 8
38. ENSGALG00000004127 ENSGALG00000004127 566 0.795 - - 0.795 - - - - - - -
39. TRIM24 ENSGALG00000012823 2725 0.795 - - - - - - - - 0.795 - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
40. MRGBP ENSGALG00000005531 79 0.793 - - - - - - - - 0.793 - MRG domain binding protein [Source:HGNC Symbol;Acc:HGNC:15866]
41. TRUB1 ENSGALG00000009091 1005 0.792 - - - - - - - - 0.792 - TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060]
42. FLCN ENSGALG00000004816 4101 0.792 - - - - - - - - 0.792 - folliculin, transcript variant X1
43. TMEM132B ENSGALG00000002742 122 0.791 - - 0.791 - - - - - - - transmembrane protein 132B [Source:HGNC Symbol;Acc:HGNC:29397]
44. NUDT15 ENSGALG00000016994 210 0.79 - - - - - - - - - 0.790 nudix hydrolase 15 [Source:HGNC Symbol;Acc:HGNC:23063]
45. CREB3 ENSGALG00000002523 23 0.79 - - 0.790 - - - - - - - cAMP responsive element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:2347]
46. FAM3B ENSGALG00000016140 111 0.79 - - 0.790 - - - - - - - family with sequence similarity 3 member B [Source:HGNC Symbol;Acc:HGNC:1253]
47. ENSGALG00000028778 ENSGALG00000028778 47 0.79 - - 0.790 - - - - - - -
48. PDZK1IP1 ENSGALG00000010473 551 0.789 - - 0.789 - - - - - - - PDZK1 interacting protein 1 [Source:NCBI gene;Acc:424619]
49. CPSF2 ENSGALG00000010783 5236 0.787 - - 0.787 - - - - - - - cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
50. NHLRC2 ENSGALG00000008946 387 0.787 - - 0.787 - - - - - - - NHL repeat containing 2 [Source:NCBI gene;Acc:423903]
51. DFFB ENSGALG00000036295 88 0.787 - - 0.787 - - - - - - - DNA fragmentation factor subunit beta [Source:NCBI gene;Acc:374158]
52. ACSF3 ENSGALG00000035225 261 0.786 - - 0.786 - - - - - - - acyl-CoA synthetase family member 3 [Source:HGNC Symbol;Acc:HGNC:27288]
53. SCN5A ENSGALG00000006112 137 0.784 - - 0.784 - - - - - - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
54. KLF6 ENSGALG00000033178 679 0.781 - - 0.781 - - - - - - - Kruppel like factor 6 [Source:NCBI gene;Acc:420463]
55. PTPRQ ENSGALG00000010935 626 0.78 - - - - - - - - - 0.780 protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
56. EIF4G1 ENSGALG00000008520 1241 0.779 - - - - - - - - - 0.779 eukaryotic translation initiation factor 4 gamma 1 [Source:HGNC Symbol;Acc:HGNC:3296]
57. ZUFSP 549 0.778 - - - - - - - - - 0.778 zinc finger with UFM1 specific peptidase domain
58. HEXDC ENSGALG00000039839 936 0.778 - - 0.778 - - - - - - - hexosaminidase D [Source:HGNC Symbol;Acc:HGNC:26307]
59. TUBGCP2 ENSGALG00000003526 1005 0.777 - - - - - - - - 0.777 - tubulin gamma complex associated protein 2 [Source:NCBI gene;Acc:423673]
60. DLX6 ENSGALG00000023195 29 0.777 - - 0.777 - - - - - - - distal-less homeobox 6 [Source:NCBI gene;Acc:772070]
61. MKP3 MKP3 4418 0.776 - - 0.776 - - - - - - -
62. FANCM ENSGALG00000031182 1030 0.775 - - 0.775 - - - - - - - FA complementation group M [Source:HGNC Symbol;Acc:HGNC:23168]
63. ALKBH8 ENSGALG00000017170 699 0.775 - - 0.775 - - - - - - - alkB homolog 8, tRNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:25189]
64. NAF1 ENSGALG00000009496 2003 0.775 - - - - - - - - 0.775 - nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126]
65. FANCB ENSGALG00000016569 1193 0.773 - - 0.773 - - - - - - - FA complementation group B [Source:NCBI gene;Acc:418628]
66. PIP5K1C ENSGALG00000000784 492 0.773 - - 0.773 - - - - - - - Gallus gallus phosphatidylinositol-4-phosphate 5-kinase, type I, gamma (PIP5K1C), mRNA. [Source:RefSeq mRNA;Acc:NM_001319021]
67. ENSGALG00000024159 ENSGALG00000024159 461 0.77 - - - - - - - - - 0.770
68. ZC3HAV1 ENSGALG00000013911 162 0.768 - - - - - - - - 0.768 - zinc finger CCCH-type containing, antiviral 1 [Source:NCBI gene;Acc:426315]
69. DVL3 ENSGALG00000008414 38 0.765 - - 0.765 - - - - - - - dishevelled segment polarity protein 3 [Source:HGNC Symbol;Acc:HGNC:3087]
70. C26H6ORF89 C26H6ORF89 1826 0.764 - - 0.764 - - - - - - -
71. URAH ENSGALG00000000549 484 0.763 - - - - - - - - - 0.763 5-hydroxyisourate hydrolase [Source:NCBI gene;Acc:415859]
72. CNKSR1 ENSGALG00000046299 195 0.763 - - 0.763 - - - - - - - connector enhancer of kinase suppressor of Ras 1 [Source:HGNC Symbol;Acc:HGNC:19700]
73. SNED1 ENSGALG00000043596 693 0.762 - - 0.762 - - - - - - - sushi, nidogen and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:24696]
74. VTI1B ENSGALG00000009526 133 0.761 - - 0.761 - - - - - - - vesicle transport through interaction with t-SNAREs 1B [Source:HGNC Symbol;Acc:HGNC:17793]
75. FAM46A ENSGALG00000035903 891 0.761 - - 0.761 - - - - - - - family with sequence similarity 46 member A [Source:NCBI gene;Acc:421845]
76. GALT ENSGALG00000026195 2002 0.761 - - - - - - - - - 0.761 galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
77. ZDHHC14 ENSGALG00000013695 2648 0.76 - - - - - - - - 0.760 - zinc finger DHHC-type containing 14 [Source:HGNC Symbol;Acc:HGNC:20341]
78. BECN1 ENSGALG00000002973 1569 0.76 - - 0.760 - - - - - - - beclin 1 [Source:NCBI gene;Acc:420018]
79. CCT8 ENSGALG00000015821 12161 0.759 - - - - - - - - 0.759 - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
80. ENSGALG00000008543 ENSGALG00000008543 491 0.758 - - - - - - - - - 0.758
81. PLCXD1 ENSGALG00000016721 289 0.758 - - - - - - - - - 0.758 phosphatidylinositol specific phospholipase C X domain containing 1 [Source:NCBI gene;Acc:418673]
82. PKD2 ENSGALG00000010921 55 0.757 - - 0.757 - - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
83. MAP1LC3A ENSGALG00000038721 2230 0.754 - - - - - - - - - 0.754 microtubule associated protein 1 light chain 3 alpha
84. EIF3D ENSGALG00000012529 40887 0.754 - - - - - - - - 0.754 - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
85. SNORD38 SNORD38 537 0.753 - - - - - - - - 0.753 -
86. SHCBP1 ENSGALG00000004444 59 0.753 - - - - - - - - - 0.753 SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]
87. gga-mir-1306 ENSGALG00000025271 1231 0.753 - - - - - - - - 0.753 - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
88. SPTY2D1 ENSGALG00000006355 994 0.752 - - - - - - - - - 0.752 SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
89. PRKCE ENSGALG00000010000 99 0.751 - - 0.751 - - - - - - - protein kinase C epsilon, transcript variant X1
90. WDR5 ENSGALG00000002659 13008 0.751 - - 0.751 - - - - - - - WD repeat domain 5 [Source:NCBI gene;Acc:417144]
91. NPM1 ENSGALG00000002197 24109 0.751 - - - - - - - - 0.751 - nucleophosmin [Source:NCBI gene;Acc:396203]
92. TBC1D5 ENSGALG00000011251 287 0.75 - - 0.750 - - - - - - - TBC1 domain family member 5 [Source:HGNC Symbol;Acc:HGNC:19166]
93. KIAA1045 KIAA1045 23 0.75 - - - - - - - - - 0.750
94. SLC9A9 ENSGALG00000002374 179 0.75 - - - - - - - - - 0.750 solute carrier family 9 member A9 [Source:NCBI gene;Acc:424772]
95. PCNXL4 PCNXL4 58 0.75 - - - - - - - - - 0.750
96. ENSGALG00000026925 ENSGALG00000026925 119 0.749 - - 0.749 - - - - - - -
97. TTC28 ENSGALG00000005676 36 0.748 - - - - - - - - - 0.748 tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
98. DIXDC1 ENSGALG00000007929 67 0.747 - - 0.747 - - - - - - - DIX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23695]
99. FHOD1 ENSGALG00000002198 426 0.746 - - - - - - - - - 0.746 formin homology 2 domain containing 1 [Source:NCBI gene;Acc:415672]
100. SYNC ENSGALG00000003529 389 0.745 - - - - - - - - - 0.745 syncoilin, intermediate filament protein [Source:HGNC Symbol;Acc:HGNC:28897]

There are 102 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA