Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for VAMP1

Gene Name Gene ID Reads Annotation
VAMP1 ENSGALG00000022955 1 vesicle-associated membrane protein 1 (synaptobrevin 1) [Source:NCBI gene;Acc:418273]











Genes with expression patterns similar to VAMP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. VAMP1 ENSGALG00000022955 1 2 - - 1.000 - - 1.000 - - - - vesicle-associated membrane protein 1 (synaptobrevin 1) [Source:NCBI gene;Acc:418273]
2. GSAP ENSGALG00000008312 12 1 - - - - - 1.000 - - - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
3. CDH7 ENSGALG00000013782 11 1 - - - - - 1.000 - - - - cadherin 7 [Source:NCBI gene;Acc:374007]
4. AGPAT4 ENSGALG00000011571 4 1 - - - - - 1.000 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:20885]
5. DISP2 ENSGALG00000031266 5 1 - - - - - 1.000 - - - - dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]
6. DCBLD1 ENSGALG00000014907 19 1 - - 1.000 - - - - - - - discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]
7. ENSGALG00000005344 ENSGALG00000005344 6 1 - - - - - 1.000 - - - -
8. WDR72 ENSGALG00000004545 5 1 - - - - - 1.000 - - - - WD repeat domain 72 [Source:HGNC Symbol;Acc:HGNC:26790]
9. ZCCHC7 ENSGALG00000028675 3 1 - - 1.000 - - - - - - - zinc finger CCHC-type containing 7 [Source:HGNC Symbol;Acc:HGNC:26209]
10. EBP EBP 2 1 - - 1.000 - - - - - - -
11. CCR4 ENSGALG00000039146 20 1 - - - - - 1.000 - - - - C-C motif chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1605]
12. CDKN2B ENSGALG00000026137 0 1 - - 1.000 - - - - - - - cyclin dependent kinase inhibitor 2B [Source:NCBI gene;Acc:395076]
13. CABLES2 ENSGALG00000005345 6 1 - - - - - 1.000 - - - - Cdk5 and Abl enzyme substrate 2 [Source:HGNC Symbol;Acc:HGNC:16143]
14. SPP2 ENSGALG00000004129 34 1 - - - - - 1.000 - - - - secreted phosphoprotein 2 [Source:NCBI gene;Acc:396080]
15. ABCA12 ENSGALG00000003553 9 1 - - - - - 1.000 - - - - ATP binding cassette subfamily A member 12 [Source:HGNC Symbol;Acc:HGNC:14637]
16. YPEL2 ENSGALG00000028801 1 1 - - 1.000 - - - - - - - yippee like 2 [Source:NCBI gene;Acc:417632]
17. ACTL10 ACTL10 3 1 - - - - - 1.000 - - - -
18. ACSS1L ENSGALG00000010225 5 1 - - 1.000 - - - - - - - acyl-CoA synthetase short-chain family member 1-like, transcript variant X3
19. NDST4 ENSGALG00000012015 43 1 - - - - - 1.000 - - - - N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
20. VIL1 ENSGALG00000037286 5 1 - - - - - 1.000 - - - - villin 1 [Source:NCBI gene;Acc:396423]
21. ENSGALG00000006582 ENSGALG00000006582 8 1 - - - - - 1.000 - - - -
22. HDC ENSGALG00000023436 3 1 - - - - - 1.000 - - - - histidine decarboxylase [Source:NCBI gene;Acc:415454]
23. DNM3 ENSGALG00000033244 6 1 - - 1.000 - - - - - - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
24. CCDC181 ENSGALG00000015221 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]
25. ZPBP ENSGALG00000013083 26 1 - - - - - 1.000 - - - - zona pellucida binding protein [Source:NCBI gene;Acc:404537]
26. ENSGALG00000029114 ENSGALG00000029114 4 1 - - 1.000 - - - - - - -
27. PTHRP PTHRP 8 1 - - - - - 1.000 - - - -
28. ENSGALG00000025939 ENSGALG00000025939 0 1 - - 1.000 - - - - - - -
29. NRARP ENSGALG00000027231 2 1 - - 1.000 - - - - - - - NOTCH regulated ankyrin repeat protein [Source:HGNC Symbol;Acc:HGNC:33843]
30. FUK ENSGALG00000002648 9 1 - - - - - 1.000 - - - - fucokinase [Source:HGNC Symbol;Acc:HGNC:29500]
31. ASB18 ENSGALG00000046564 7 1 - - 1.000 - - - - - - - ankyrin repeat and SOCS box containing 18 [Source:HGNC Symbol;Acc:HGNC:19770]
32. ENSGALG00000019135 ENSGALG00000019135 0 1 - - - - - 1.000 - - - -
33. ENSGALG00000003188 ENSGALG00000003188 2 1 - - - - - 1.000 - - - -
34. VWC2L ENSGALG00000003472 13 1 - - - - - 1.000 - - - - von Willebrand factor C domain containing protein 2 like [Source:HGNC Symbol;Acc:HGNC:37203]
35. FGF5 ENSGALG00000045521 1 1 - - 1.000 - - - - - - - fibroblast growth factor 5 [Source:HGNC Symbol;Acc:HGNC:3683]
36. CASQ2 ENSGALG00000015018 157 1 - - - - - 1.000 - - - - calsequestrin 2 [Source:NCBI gene;Acc:395198]
37. SLC25A43 ENSGALG00000008682 1 1 - - 1.000 - - - - - - - solute carrier family 25 member 43 [Source:HGNC Symbol;Acc:HGNC:30557]
38. CSF1R ENSGALG00000005725 5 1 - - 1.000 - - - - - - - Gallus gallus colony stimulating factor 1 receptor (CSF1R), mRNA. [Source:RefSeq mRNA;Acc:NM_001321517]
39. uc_3 uc_3 1 1 - - - - - 1.000 - - - -
40. TPH2 ENSGALG00000010198 5 1 - - 1.000 - - - - - - - tryptophan hydroxylase 2 [Source:NCBI gene;Acc:408026]
41. AIPL1 0 1 - - 1.000 - - - - - - - aryl hydrocarbon receptor interacting protein like 1
42. C17orf58 ENSGALG00000003590 4 1 - - - - - 1.000 - - - - chromosome 17 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:27568]
43. MGAT4D ENSGALG00000009830 23 1 - - - - - 1.000 - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
44. TCFL5 ENSGALG00000045499 2 1 - - - - - 1.000 - - - - transcription factor like 5 [Source:HGNC Symbol;Acc:HGNC:11646]
45. GABRA5 ENSGALG00000016744 12 1 - - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
46. DCDC2B ENSGALG00000046649 3 1 - - - - - 1.000 - - - - doublecortin domain containing 2B [Source:HGNC Symbol;Acc:HGNC:32576]
47. LOC422926 ENSGALG00000027090 16 1 - - - - - 1.000 - - - - uncharacterized LOC422926
48. SERHL2 ENSGALG00000011867 2 1 - - 1.000 - - - - - - - serine hydrolase like 2 [Source:NCBI gene;Acc:417976]
49. ZMAT3 ENSGALG00000040948 4 1 - - 1.000 - - - - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
50. ENSGALG00000029149 ENSGALG00000029149 7 1 - - 1.000 - - - - - - -
51. SERPINA10 ENSGALG00000020391 128 1 - - 1.000 - - - - - - - serpin family A member 10 [Source:HGNC Symbol;Acc:HGNC:15996]
52. ENSGALG00000019291 ENSGALG00000019291 4 1 - - - - - 1.000 - - - -
53. B3GAT1 ENSGALG00000001611 0 1 - - - - - 1.000 - - - - beta-1,3-glucuronyltransferase 1 [Source:NCBI gene;Acc:373949]
54. CCDC71L 0 1 - - 1.000 - - - - - - - coiled-coil domain containing 71-like
55. TOM1L2 ENSGALG00000004902 89 1 - - - - - 1.000 - - - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
56. SLC24A5 ENSGALG00000004885 8 1 - - 1.000 - - - - - - - solute carrier family 24 member 5 [Source:NCBI gene;Acc:415431]
57. PGAP1 ENSGALG00000030789 3 1 - - 1.000 - - - - - - - post-GPI attachment to proteins 1, transcript variant X3
58. PEX5L ENSGALG00000043386 5 1 - - - - - 1.000 - - - - peroxisomal biogenesis factor 5 like [Source:HGNC Symbol;Acc:HGNC:30024]
59. ENSGALG00000012780 ENSGALG00000012780 10 1 - - - - - 1.000 - - - -
60. HEMK1 ENSGALG00000002253 40 1 - - 1.000 - - - - - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
61. LOC100857820 ENSGALG00000001824 16 1 - - 1.000 - - - - - - - uncharacterized LOC100857820
62. GPX2 ENSGALG00000042031 4 1 - - 1.000 - - - - - - - glutathione peroxidase 2 [Source:NCBI gene;Acc:100857454]
63. TEX2L ENSGALG00000005421 52 1 - - - - - 1.000 - - - - testis expressed 2-like, transcript variant X1
64. KEL ENSGALG00000014736 18 1 - - - - - 1.000 - - - - Kell blood group, metallo-endopeptidase, transcript variant X4
65. TTLL9 ENSGALG00000006460 11 1 - - - - - 1.000 - - - - tubulin tyrosine ligase like 9 [Source:HGNC Symbol;Acc:HGNC:16118]
66. RAB9B ENSGALG00000004918 2 1 - - - - - 1.000 - - - - RAB9B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:14090]
67. MBLAC2 ENSGALG00000014649 16 1 - - - - - 1.000 - - - - metallo-beta-lactamase domain containing 2 [Source:NCBI gene;Acc:431565]
68. CAMK2A ENSGALG00000005621 3 1 - - - - - 1.000 - - - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
69. LOC101747660 ENSGALG00000027822 4 1 - - 1.000 - - - - - - - uncharacterized LOC101747660
70. JAKMIP1 ENSGALG00000015528 11 1 - - - - - 1.000 - - - - janus kinase and microtubule interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26460]
71. ADCY5 ENSGALG00000031244 10 1 - - - - - 1.000 - - - - adenylate cyclase 5 [Source:NCBI gene;Acc:395340]
72. CCDC177 ENSGALG00000026215 10 1 - - - - - 1.000 - - - - coiled-coil domain containing 177
73. CTSEAL ENSGALG00000010018 0 1 - - - - - 1.000 - - - - Gallus gallus cathepsin E-A-like (CTSEAL), mRNA. [Source:RefSeq mRNA;Acc:NM_001318427]
74. GRAMD1B ENSGALG00000006494 5 1 - - - - - 1.000 - - - - GRAM domain containing 1B [Source:HGNC Symbol;Acc:HGNC:29214]
75. LOXL4 ENSGALG00000013090 9 1 - - 1.000 - - - - - - - lysyl oxidase like 4 [Source:HGNC Symbol;Acc:HGNC:17171]
76. RNF170 ENSGALG00000015386 296 0.97 - - - - - 0.970 - - - - ring finger protein 170 [Source:NCBI gene;Acc:427296]
77. RCOR1 ENSGALG00000011384 22 0.967 - - - - - 0.967 - - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
78. OSGIN2 ENSGALG00000042840 83 0.964 - - - - - 0.964 - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
79. KIAA1549 ENSGALG00000012796 60 0.956 - - - - - 0.956 - - - - KIAA1549 [Source:HGNC Symbol;Acc:HGNC:22219]
80. PDCL2 ENSGALG00000013783 9 0.954 - - - - - 0.954 - - - - phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
81. NPBWR1 ENSGALG00000015261 6 0.953 - - - - - 0.953 - - - - Gallus gallus neuropeptides B/W receptor 1 (NPBWR1), mRNA. [Source:RefSeq mRNA;Acc:NM_001327793]
82. ENSGALG00000022901 ENSGALG00000022901 19 0.936 - - - - - 0.936 - - - -
83. MAPK8 ENSGALG00000006109 51 0.926 - - - - - 0.926 - - - - mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]
84. GNRH1 9 0.921 - - 0.921 - - - - - - - gonadotropin releasing hormone 1
85. DLST ENSGALG00000010286 19 0.902 - - - - - 0.902 - - - - dihydrolipoamide S-succinyltransferase [Source:NCBI gene;Acc:423357]
86. CROCC 5 0.893 - - - - - 0.893 - - - - ciliary rootlet coiled-coil, rootletin, transcript variant X6
87. SNORA4 SNORA4 12 0.888 - - - - - 0.888 - - - -
88. MAP3K21 ENSGALG00000011008 54 0.885 - - - - - 0.885 - - - - mitogen-activated protein kinase kinase kinase 21 [Source:HGNC Symbol;Acc:HGNC:29798]
89. MTHFD2L ENSGALG00000010855 14 0.881 - - - - - 0.881 - - - - methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like [Source:HGNC Symbol;Acc:HGNC:31865]
90. CWH43 ENSGALG00000041921 68 0.876 - - - - - 0.876 - - - - cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]
91. MAPK10 ENSGALG00000011109 16 0.875 - - 0.875 - - - - - - - Gallus gallus mitogen-activated protein kinase 10 (MAPK10), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001318224]
92. OLFML2B ENSGALG00000002667 8 0.873 - - - - - 0.873 - - - - olfactomedin like 2B [Source:HGNC Symbol;Acc:HGNC:24558]
93. SBSPONL ENSGALG00000005862 129 0.871 - - - - - 0.871 - - - - somatomedin B and thrombospondin type 1 domain containing like [Source:NCBI gene;Acc:416923]
94. Mar-08 Mar-08 106 0.849 - - - - - 0.849 - - - -
95. SNAPC4 ENSGALG00000044726 36 0.836 - - - - - 0.836 - - - - small nuclear RNA activating complex polypeptide 4 [Source:HGNC Symbol;Acc:HGNC:11137]
96. ENSGALG00000024437 ENSGALG00000024437 73 0.807 - - - - - 0.807 - - - -
97. RECK ENSGALG00000036829 252 0.806 - - - - - 0.806 - - - - reversion inducing cysteine rich protein with kazal motifs [Source:HGNC Symbol;Acc:HGNC:11345]
98. EPC1 ENSGALG00000007169 101 0.799 - - - - - 0.799 - - - - enhancer of polycomb homolog 1 [Source:HGNC Symbol;Acc:HGNC:19876]
99. GJD2 ENSGALG00000009845 236 0.796 - - - - - 0.796 - - - - gap junction protein delta 2 [Source:NCBI gene;Acc:395273]
100. ENSGALG00000012332 ENSGALG00000012332 71 0.795 - - - - - 0.795 - - - -

There are 31 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA