Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Usp39

Gene Name Gene ID Reads Annotation
Usp39 ENSMUSG00000056305, ENSMUSG00000104250 2165 ubiquitin specific peptidase 39 [Source:MGI Symbol;Acc:MGI:107622]







Genes with expression patterns similar to Usp39

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Usp39 ENSMUSG00000056305, ENSMUSG00000104250 2165 6 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 39 [Source:MGI Symbol;Acc:MGI:107622]
2. Fndc3a ENSMUSG00000033487 1185 1.502 - 0.791 - - - 0.711 fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
3. Wdr76 ENSMUSG00000027242 1591 0.874 - 0.874 - - - - WD repeat domain 76 [Source:MGI Symbol;Acc:MGI:1926186]
4. Zmynd19 ENSMUSG00000026974 1400 0.87 - 0.870 - - - - zinc finger, MYND domain containing 19 [Source:MGI Symbol;Acc:MGI:1914437]
5. Cops3 ENSMUSG00000019373 2260 0.861 - 0.861 - - - - COP9 signalosome subunit 3 [Source:MGI Symbol;Acc:MGI:1349409]
6. Sirt1 ENSMUSG00000020063 2336 0.855 - 0.855 - - - - sirtuin 1 [Source:MGI Symbol;Acc:MGI:2135607]
7. Saal1 ENSMUSG00000006763 2057 0.846 - 0.846 - - - - serum amyloid A-like 1 [Source:MGI Symbol;Acc:MGI:1926185]
8. Rasl11a ENSMUSG00000029641 1364 0.845 - 0.845 - - - - RAS-like, family 11, member A [Source:MGI Symbol;Acc:MGI:1916145]
9. Edf1 ENSMUSG00000015092 1918 0.844 - 0.844 - - - - endothelial differentiation-related factor 1 [Source:MGI Symbol;Acc:MGI:1891227]
10. Sugp2 ENSMUSG00000036054 1239 0.838 - 0.838 - - - - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
11. Ube2e2 ENSMUSG00000058317 729 0.838 - 0.838 - - - - ubiquitin-conjugating enzyme E2E 2 [Source:MGI Symbol;Acc:MGI:2384997]
12. Ppfia1 ENSMUSG00000037519 3319 0.836 - 0.836 - - - - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
13. Gm4149 ENSMUSG00000074800 1265 0.835 - 0.835 - - - - predicted pseudogene 4149 [Source:MGI Symbol;Acc:MGI:3782325]
14. Ipo11 ENSMUSG00000042590 2107 0.834 - 0.834 - - - - importin 11 [Source:MGI Symbol;Acc:MGI:2442377]
15. E130307A14Rik ENSMUSG00000087177 1348 0.834 - 0.834 - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
16. Sfr1 ENSMUSG00000025066 7102 0.833 - 0.833 - - - - SWI5 dependent recombination repair 1 [Source:MGI Symbol;Acc:MGI:1915038]
17. Actr3 ENSMUSG00000026341 4146 0.831 - 0.831 - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
18. Cdc14a ENSMUSG00000033502 731 0.83 - 0.830 - - - - CDC14 cell division cycle 14A [Source:MGI Symbol;Acc:MGI:2442676]
19. Mrpl4 ENSMUSG00000003299 1998 0.829 - 0.829 - - - - mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]
20. Gm10275 ENSMUSG00000069682 10249 0.828 - 0.828 - - - - predicted pseudogene 10275 [Source:MGI Symbol;Acc:MGI:3704354]
21. Gm16536 ENSMUSG00000089810 948 0.828 - 0.828 - - - - predicted gene 16536 [Source:MGI Symbol;Acc:MGI:4414956]
22. Mns1 ENSMUSG00000032221 1295 0.827 - 0.827 - - - - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
23. 4632434I11Rik 4632434I11Rik 951 0.827 - 0.827 - - - -
24. Hoxb5 ENSMUSG00000038700 2439 0.826 - 0.826 - - - - homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
25. Snapc3 ENSMUSG00000028483 2319 0.825 - 0.825 - - - - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
26. Hdhd2 ENSMUSG00000025421 1778 0.825 - 0.825 - - - - haloacid dehalogenase-like hydrolase domain containing 2 [Source:MGI Symbol;Acc:MGI:1924237]
27. Ppp1r15b ENSMUSG00000046062 1778 0.823 - 0.823 - - - - protein phosphatase 1, regulatory subunit 15B [Source:MGI Symbol;Acc:MGI:2444211]
28. Chfr ENSMUSG00000014668 1287 0.821 - 0.821 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
29. Derl2 ENSMUSG00000018442 2288 0.82 - 0.820 - - - - Der1-like domain family, member 2 [Source:MGI Symbol;Acc:MGI:2151483]
30. Wbscr22 2759 0.82 - 0.820 - - - - Williams Beuren syndrome chromosome region 22, transcript variant X1
31. Med13l ENSMUSG00000018076 1863 0.819 - 0.819 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
32. Crcp ENSMUSG00000025532 699 0.819 - 0.819 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
33. Ubox5 ENSMUSG00000027300 434 0.818 - 0.818 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
34. Rrp15 ENSMUSG00000001305 966 0.816 - 0.816 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
35. Armc1 ENSMUSG00000027599 6408 0.816 - 0.816 - - - - armadillo repeat containing 1 [Source:MGI Symbol;Acc:MGI:1921502]
36. Ireb2 ENSMUSG00000032293 2276 0.816 - 0.816 - - - - iron responsive element binding protein 2 [Source:MGI Symbol;Acc:MGI:1928268]
37. Trmt2a ENSMUSG00000022721, ENSMUSG00000098930 1641 0.814 - 0.814 - - - - TRM2 tRNA methyltransferase 2A [Source:MGI Symbol;Acc:MGI:96270]
38. Nop16 ENSMUSG00000025869 1347 0.813 - 0.813 - - - - NOP16 nucleolar protein [Source:MGI Symbol;Acc:MGI:107862]
39. Dhx30 ENSMUSG00000032480 2314 0.813 - 0.813 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 30 [Source:MGI Symbol;Acc:MGI:1920081]
40. Zfp444 ENSMUSG00000044876 1576 0.813 - 0.813 - - - - zinc finger protein 444 [Source:MGI Symbol;Acc:MGI:1923365]
41. Usp31 ENSMUSG00000063317 2365 0.813 - 0.813 - - - - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
42. Zfp609 ENSMUSG00000040524 1316 0.812 - 0.812 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
43. Sec11c ENSMUSG00000024516 640 0.812 - 0.812 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
44. Lin7c ENSMUSG00000027162 3559 0.812 - - - - - 0.812 lin-7 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1330839]
45. Trmt5 ENSMUSG00000034442 564 0.811 - - - - - 0.811 TRM5 tRNA methyltransferase 5 [Source:MGI Symbol;Acc:MGI:1923607]
46. Phyh ENSMUSG00000026664 659 0.811 - 0.811 - - - - phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
47. Zfp346 ENSMUSG00000021481 1512 0.81 - 0.810 - - - - zinc finger protein 346 [Source:MGI Symbol;Acc:MGI:1349417]
48. Polr2b ENSMUSG00000029250 2820 0.81 - 0.810 - - - - polymerase (RNA) II (DNA directed) polypeptide B [Source:MGI Symbol;Acc:MGI:2388280]
49. C1qb ENSMUSG00000036905 664 0.81 - 0.810 - - - - complement component 1, q subcomponent, beta polypeptide [Source:MGI Symbol;Acc:MGI:88224]
50. Chka ENSMUSG00000024843 2599 0.81 - 0.810 - - - - choline kinase alpha [Source:MGI Symbol;Acc:MGI:107760]
51. Immp1l ENSMUSG00000042670 2132 0.809 - 0.809 - - - - IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
52. Ss18 ENSMUSG00000037013 2742 0.809 - 0.809 - - - - SS18, nBAF chromatin remodeling complex subunit [Source:MGI Symbol;Acc:MGI:107708]
53. Tgfbrap1 ENSMUSG00000070939 1413 0.808 - 0.808 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
54. Zfyve20 Zfyve20 1677 0.807 - 0.807 - - - -
55. Klf11 ENSMUSG00000020653 838 0.807 - 0.807 - - - - Kruppel-like factor 11 [Source:MGI Symbol;Acc:MGI:2653368]
56. Pde7a ENSMUSG00000069094 2633 0.807 - 0.807 - - - - phosphodiesterase 7A [Source:MGI Symbol;Acc:MGI:1202402]
57. Usp2 ENSMUSG00000032010 525 0.807 - 0.807 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
58. Eri3 ENSMUSG00000033423 3943 0.806 - 0.806 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
59. Zbtb10 ENSMUSG00000069114 1974 0.806 - 0.806 - - - - zinc finger and BTB domain containing 10 [Source:MGI Symbol;Acc:MGI:2139883]
60. Mzt2 ENSMUSG00000022671 866 0.806 - 0.806 - - - - mitotic spindle organizing protein 2 [Source:MGI Symbol;Acc:MGI:1922845]
61. Mib1 ENSMUSG00000024294 3226 0.806 - 0.806 - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:2443157]
62. Atp6v0e ENSMUSG00000015575 2494 0.805 - 0.805 - - - - ATPase, H+ transporting, lysosomal V0 subunit E [Source:MGI Symbol;Acc:MGI:1328318]
63. Ppp2r3c ENSMUSG00000021022 750 0.805 - - - - - 0.805 protein phosphatase 2, regulatory subunit B'', gamma [Source:MGI Symbol;Acc:MGI:1930009]
64. Mbtps2 ENSMUSG00000046873 1811 0.805 - 0.805 - - - - membrane-bound transcription factor peptidase, site 2 [Source:MGI Symbol;Acc:MGI:2444506]
65. Evi5l ENSMUSG00000011832 691 0.804 - 0.804 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
66. 0610010F05Rik ENSMUSG00000042208 755 0.804 - 0.804 - - - - RIKEN cDNA 0610010F05 gene [Source:MGI Symbol;Acc:MGI:1918925]
67. Dlst ENSMUSG00000004789 1541 0.804 - 0.804 - - - - dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) [Source:MGI Symbol;Acc:MGI:1926170]
68. Hoxa10 ENSMUSG00000000938 217 0.804 - - - - - 0.804 homeobox A10 [Source:MGI Symbol;Acc:MGI:96171]
69. Pdcd11 ENSMUSG00000025047 1164 0.803 - 0.803 - - - - programmed cell death 11 [Source:MGI Symbol;Acc:MGI:1341788]
70. Rps19bp1 ENSMUSG00000051518 828 0.803 - 0.803 - - - - ribosomal protein S19 binding protein 1 [Source:MGI Symbol;Acc:MGI:1913788]
71. Exog ENSMUSG00000042787 1392 0.803 - 0.803 - - - - endo/exonuclease (5'-3'), endonuclease G-like [Source:MGI Symbol;Acc:MGI:2143333]
72. Dpm3 ENSMUSG00000042737 1272 0.802 - 0.802 - - - - dolichyl-phosphate mannosyltransferase polypeptide 3 [Source:MGI Symbol;Acc:MGI:1915813]
73. Ccar2 ENSMUSG00000033712 2357 0.802 - 0.802 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
74. Vezt ENSMUSG00000036099 1919 0.801 - 0.801 - - - - vezatin, adherens junctions transmembrane protein [Source:MGI Symbol;Acc:MGI:2143698]
75. Prcc ENSMUSG00000004895 527 0.801 - 0.801 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
76. Dido1 ENSMUSG00000038914 1891 0.801 - 0.801 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
77. Pigs ENSMUSG00000041958 765 0.801 - 0.801 - - - - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
78. Wnk3 ENSMUSG00000041245 552 0.801 - 0.801 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
79. Sdc1 ENSMUSG00000020592 1879 0.801 - 0.801 - - - - syndecan 1 [Source:MGI Symbol;Acc:MGI:1349162]
80. Gm16702 ENSMUSG00000097796 133 0.8 - 0.800 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
81. Rnf20 ENSMUSG00000028309 3488 0.8 - 0.800 - - - - ring finger protein 20 [Source:MGI Symbol;Acc:MGI:1925927]
82. Cep63 ENSMUSG00000032534 639 0.799 - - - - - 0.799 centrosomal protein 63 [Source:MGI Symbol;Acc:MGI:2158560]
83. Acd ENSMUSG00000038000 1058 0.799 - 0.799 - - - - adrenocortical dysplasia [Source:MGI Symbol;Acc:MGI:87873]
84. Cryzl1 ENSMUSG00000058240 2195 0.799 - 0.799 - - - - crystallin, zeta (quinone reductase)-like 1 [Source:MGI Symbol;Acc:MGI:1913859]
85. Nvl ENSMUSG00000026516 1431 0.798 - 0.798 - - - - nuclear VCP-like [Source:MGI Symbol;Acc:MGI:1914709]
86. Dpy19l4 ENSMUSG00000045205 962 0.797 - 0.797 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
87. AW209491 ENSMUSG00000039182 618 0.797 - 0.797 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
88. Mrps12 ENSMUSG00000045948 1578 0.796 - 0.796 - - - - mitochondrial ribosomal protein S12 [Source:MGI Symbol;Acc:MGI:1346333]
89. Atp8a1 ENSMUSG00000037685 1155 0.796 - 0.796 - - - - ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
90. Mef2c ENSMUSG00000005583 2710 0.796 - 0.796 - - - - myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
91. Gm11944 ENSMUSG00000084941 286 0.795 - 0.795 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
92. Gm6483 ENSMUSG00000087153 1875 0.795 - 0.795 - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
93. Psmf1 ENSMUSG00000032869 3177 0.795 - 0.795 - - - - proteasome (prosome, macropain) inhibitor subunit 1 [Source:MGI Symbol;Acc:MGI:1346072]
94. Pcna ENSMUSG00000027342 4927 0.795 - 0.795 - - - - proliferating cell nuclear antigen [Source:MGI Symbol;Acc:MGI:97503]
95. Gm10689 ENSMUSG00000074412 328 0.795 - 0.795 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
96. Fbn1 ENSMUSG00000027204 960 0.795 - 0.795 - - - - fibrillin 1 [Source:MGI Symbol;Acc:MGI:95489]
97. Zfp46 ENSMUSG00000051351 1419 0.795 - 0.795 - - - - zinc finger protein 46 [Source:MGI Symbol;Acc:MGI:99192]
98. Nsun4 ENSMUSG00000028706 804 0.795 - 0.795 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
99. Tmem243 ENSMUSG00000079659 181 0.793 - 0.793 - - - - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
100. Pgap1 ENSMUSG00000073678 833 0.793 - 0.793 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]

There are 359 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA