Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Usp11

Gene Name Gene ID Reads Annotation
Usp11 ENSMUSG00000031066 4448 ubiquitin specific peptidase 11 [Source:MGI Symbol;Acc:MGI:2384312]







Genes with expression patterns similar to Usp11

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Usp11 ENSMUSG00000031066 4448 6 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 11 [Source:MGI Symbol;Acc:MGI:2384312]
2. Eif1ad ENSMUSG00000024841 3455 0.881 - 0.881 - - - - eukaryotic translation initiation factor 1A domain containing [Source:MGI Symbol;Acc:MGI:1917110]
3. Ddx47 ENSMUSG00000030204 1576 0.862 - - - - 0.862 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 [Source:MGI Symbol;Acc:MGI:1915005]
4. Bend3 ENSMUSG00000038214 258 0.851 - - - - 0.851 - BEN domain containing 3 [Source:MGI Symbol;Acc:MGI:2677212]
5. Atg13 ENSMUSG00000027244 1178 0.85 - - - - 0.850 - autophagy related 13 [Source:MGI Symbol;Acc:MGI:1196429]
6. 1500026H17Rik ENSMUSG00000097383 939 0.848 - - - - 0.848 - RIKEN cDNA 1500026H17 gene [Source:MGI Symbol;Acc:MGI:1916252]
7. Acer3 ENSMUSG00000030760 598 0.845 - - - - 0.845 - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
8. Ap4b1 ENSMUSG00000032952 448 0.842 - - - - 0.842 - adaptor-related protein complex AP-4, beta 1 [Source:MGI Symbol;Acc:MGI:1337130]
9. Cnpy3 ENSMUSG00000023973 1134 0.838 - - - - 0.838 - canopy FGF signaling regulator 3 [Source:MGI Symbol;Acc:MGI:1919279]
10. Stradb ENSMUSG00000026027 581 0.837 - - - - 0.837 - STE20-related kinase adaptor beta [Source:MGI Symbol;Acc:MGI:2144047]
11. Polr3a ENSMUSG00000025280 489 0.837 - - - - 0.837 - polymerase (RNA) III (DNA directed) polypeptide A [Source:MGI Symbol;Acc:MGI:2681836]
12. Tarbp2 ENSMUSG00000023051 2059 0.834 - - - - 0.834 - TARBP2, RISC loading complex RNA binding subunit [Source:MGI Symbol;Acc:MGI:103027]
13. Icmt ENSMUSG00000039662 569 0.832 - - - - 0.832 - isoprenylcysteine carboxyl methyltransferase [Source:MGI Symbol;Acc:MGI:1888594]
14. Gm2199 ENSMUSG00000083829 455 0.832 - - - - 0.832 - predicted gene 2199 [Source:MGI Symbol;Acc:MGI:3780369]
15. Dynll2 ENSMUSG00000020483 7870 0.829 - - - - 0.829 - dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347]
16. Zfp451 ENSMUSG00000042197 3435 0.827 - - - - 0.827 - zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
17. 2410131K14Rik ENSMUSG00000032840 799 0.827 - - - - 0.827 - RIKEN cDNA 2410131K14 gene [Source:MGI Symbol;Acc:MGI:1924042]
18. Mnt ENSMUSG00000000282 715 0.827 - - - - 0.827 - max binding protein [Source:MGI Symbol;Acc:MGI:109150]
19. Med28 ENSMUSG00000015804 2949 0.825 - - - - 0.825 - mediator complex subunit 28 [Source:MGI Symbol;Acc:MGI:1914249]
20. Ak2 ENSMUSG00000028792 3832 0.823 - - - - 0.823 - adenylate kinase 2 [Source:MGI Symbol;Acc:MGI:87978]
21. Zfp771 ENSMUSG00000054716 5576 0.823 - - - - 0.823 - zinc finger protein 771 [Source:MGI Symbol;Acc:MGI:2442050]
22. Ttc37 ENSMUSG00000033991 159 0.822 - - - - 0.822 - tetratricopeptide repeat domain 37 [Source:MGI Symbol;Acc:MGI:2679923]
23. Frat2 ENSMUSG00000047604 478 0.822 - - - - 0.822 - frequently rearranged in advanced T cell lymphomas 2 [Source:MGI Symbol;Acc:MGI:2673967]
24. Kcnab2 ENSMUSG00000028931 291 0.821 - - - - 0.821 - potassium voltage-gated channel, shaker-related subfamily, beta member 2 [Source:MGI Symbol;Acc:MGI:109239]
25. Dctn4 ENSMUSG00000024603 3237 0.821 - 0.821 - - - - dynactin 4 [Source:MGI Symbol;Acc:MGI:1914915]
26. Cyr61 ENSMUSG00000028195 563 0.821 - - - - 0.821 - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
27. Jazf1 ENSMUSG00000063568 47 0.82 - - - - 0.820 - JAZF zinc finger 1 [Source:MGI Symbol;Acc:MGI:2141450]
28. Akap9 ENSMUSG00000040407 2939 0.82 - - - - 0.820 - A kinase (PRKA) anchor protein (yotiao) 9 [Source:MGI Symbol;Acc:MGI:2178217]
29. 4930480K23Rik ENSMUSG00000097284 105 0.819 - - - - 0.819 - RIKEN cDNA 4930480K23 gene [Source:MGI Symbol;Acc:MGI:1922266]
30. Pla2g3 ENSMUSG00000034579 79 0.819 - - - - 0.819 - phospholipase A2, group III [Source:MGI Symbol;Acc:MGI:2444945]
31. Pigc ENSMUSG00000026698 838 0.819 - - - - 0.819 - phosphatidylinositol glycan anchor biosynthesis, class C [Source:MGI Symbol;Acc:MGI:1914542]
32. Zfp523 ENSMUSG00000024220 1001 0.819 - - - - 0.819 - zinc finger protein 523 [Source:MGI Symbol;Acc:MGI:2687278]
33. Snph ENSMUSG00000027457 95 0.819 - - - - 0.819 - syntaphilin [Source:MGI Symbol;Acc:MGI:2139270]
34. Flot2 ENSMUSG00000061981 864 0.818 - - - - 0.818 - flotillin 2 [Source:MGI Symbol;Acc:MGI:103309]
35. Tbc1d2 ENSMUSG00000039813 51 0.818 - - - - 0.818 - TBC1 domain family, member 2 [Source:MGI Symbol;Acc:MGI:2652885]
36. Gm11989 ENSMUSG00000083553 73 0.818 - - - - 0.818 - predicted gene 11989 [Source:MGI Symbol;Acc:MGI:3702318]
37. Zc3h6 ENSMUSG00000042851 135 0.818 - - - - 0.818 - zinc finger CCCH type containing 6 [Source:MGI Symbol;Acc:MGI:1926001]
38. Pacsin1 ENSMUSG00000040276 185 0.818 - - - - 0.818 - protein kinase C and casein kinase substrate in neurons 1 [Source:MGI Symbol;Acc:MGI:1345181]
39. Fbxo9 ENSMUSG00000001366 643 0.817 - - - - 0.817 - f-box protein 9 [Source:MGI Symbol;Acc:MGI:1918788]
40. E030013I19Rik ENSMUSG00000086843 118 0.817 - - - - 0.817 - RIKEN cDNA E030013I19 gene [Source:MGI Symbol;Acc:MGI:2443735]
41. Tmem25 ENSMUSG00000002032 100 0.817 - - - - 0.817 - transmembrane protein 25 [Source:MGI Symbol;Acc:MGI:1918937]
42. Gzmc ENSMUSG00000079186 38 0.816 - - - - 0.816 - granzyme C [Source:MGI Symbol;Acc:MGI:109256]
43. Vmn1r132 ENSMUSG00000074322 39 0.816 - - - - 0.816 - vomeronasal 1 receptor 132 [Source:MGI Symbol;Acc:MGI:3647009]
44. Ccdc126 ENSMUSG00000050786 121 0.816 - - - - 0.816 - coiled-coil domain containing 126 [Source:MGI Symbol;Acc:MGI:1889376]
45. Pmel ENSMUSG00000025359 54 0.816 - - - - 0.816 - premelanosome protein [Source:MGI Symbol;Acc:MGI:98301]
46. Hivep3 ENSMUSG00000028634 196 0.816 - - - - 0.816 - human immunodeficiency virus type I enhancer binding protein 3 [Source:MGI Symbol;Acc:MGI:106589]
47. Casd1 ENSMUSG00000015189 5963 0.816 - 0.816 - - - - CAS1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2384865]
48. Zfp866 ENSMUSG00000043090 1114 0.815 - - - - 0.815 - zinc finger protein 866 [Source:MGI Symbol;Acc:MGI:3584369]
49. Tfpt ENSMUSG00000006335 157 0.815 - - - - 0.815 - TCF3 (E2A) fusion partner [Source:MGI Symbol;Acc:MGI:1916964]
50. Mcoln1 ENSMUSG00000004567 281 0.815 - - - - 0.815 - mucolipin 1 [Source:MGI Symbol;Acc:MGI:1890498]
51. Plxnc1 ENSMUSG00000074785 183 0.815 - - - - 0.815 - plexin C1 [Source:MGI Symbol;Acc:MGI:1890127]
52. Surf2 ENSMUSG00000014873 372 0.815 - - - - 0.815 - surfeit gene 2 [Source:MGI Symbol;Acc:MGI:98444]
53. Mul1 ENSMUSG00000041241 430 0.814 - - - - 0.814 - mitochondrial ubiquitin ligase activator of NFKB 1 [Source:MGI Symbol;Acc:MGI:1915600]
54. Gm5644 ENSMUSG00000100104 76 0.814 - - - - 0.814 - predicted gene 5644 [Source:MGI Symbol;Acc:MGI:3646381]
55. Cdk10 ENSMUSG00000033862 738 0.814 - - - - 0.814 - cyclin-dependent kinase 10 [Source:MGI Symbol;Acc:MGI:2448549]
56. Fbxo28 ENSMUSG00000047539 2011 0.814 - - - - 0.814 - F-box protein 28 [Source:MGI Symbol;Acc:MGI:1261890]
57. Loh12cr1 Loh12cr1 321 0.813 - - - - 0.813 -
58. Fbxo8 ENSMUSG00000038206 1079 0.813 - - - - 0.813 - F-box protein 8 [Source:MGI Symbol;Acc:MGI:1354696]
59. Katnb1 ENSMUSG00000031787 333 0.813 - - - - 0.813 - katanin p80 (WD40-containing) subunit B 1 [Source:MGI Symbol;Acc:MGI:1921437]
60. Wnk4 ENSMUSG00000035112 162 0.813 - - - - 0.813 - WNK lysine deficient protein kinase 4 [Source:MGI Symbol;Acc:MGI:1917097]
61. Rfwd3 ENSMUSG00000033596 648 0.813 - - - - 0.813 - ring finger and WD repeat domain 3 [Source:MGI Symbol;Acc:MGI:2384584]
62. Kctd10 ENSMUSG00000001098 136 0.813 - - - - 0.813 - potassium channel tetramerisation domain containing 10 [Source:MGI Symbol;Acc:MGI:2141207]
63. Ets2 ENSMUSG00000022895 1363 0.813 - - - - 0.813 - E26 avian leukemia oncogene 2, 3' domain [Source:MGI Symbol;Acc:MGI:95456]
64. BC026585 1005 0.812 - - - - 0.812 - cDNA sequence BC026585, transcript variant X1
65. Rhag ENSMUSG00000023926 119 0.812 - - - - 0.812 - Rhesus blood group-associated A glycoprotein [Source:MGI Symbol;Acc:MGI:1202713]
66. Fnip2 ENSMUSG00000061175 532 0.812 - - - - 0.812 - folliculin interacting protein 2 [Source:MGI Symbol;Acc:MGI:2683054]
67. Gm14813 ENSMUSG00000082549 69 0.811 - - - - 0.811 - predicted gene 14813 [Source:MGI Symbol;Acc:MGI:3705714]
68. Bok ENSMUSG00000026278 242 0.811 - - - - 0.811 - BCL2-related ovarian killer [Source:MGI Symbol;Acc:MGI:1858494]
69. Ampd3 ENSMUSG00000005686 113 0.811 - - - - 0.811 - adenosine monophosphate deaminase 3 [Source:MGI Symbol;Acc:MGI:1096344]
70. Cmpk2 ENSMUSG00000020638 304 0.811 - - - - 0.811 - cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:99830]
71. Gm9083 ENSMUSG00000083033 141 0.811 - - - - 0.811 - predicted gene 9083 [Source:MGI Symbol;Acc:MGI:3644452]
72. Pdcd4 ENSMUSG00000024975 1336 0.81 - - - - 0.810 - programmed cell death 4 [Source:MGI Symbol;Acc:MGI:107490]
73. Lmbr1 ENSMUSG00000010721 572 0.809 - - - - 0.809 - limb region 1 [Source:MGI Symbol;Acc:MGI:1861746]
74. Krt20 ENSMUSG00000035775 230 0.809 - - - - 0.809 - keratin 20 [Source:MGI Symbol;Acc:MGI:1914059]
75. Lpin1 ENSMUSG00000020593 407 0.809 - - - - 0.809 - lipin 1 [Source:MGI Symbol;Acc:MGI:1891340]
76. Slc25a46 ENSMUSG00000024259 2222 0.809 - - - - 0.809 - solute carrier family 25, member 46 [Source:MGI Symbol;Acc:MGI:1914703]
77. Gm4117 ENSMUSG00000089940 1066 0.808 - - - - 0.808 - predicted gene 4117 [Source:MGI Symbol;Acc:MGI:3782293]
78. Txnrd3 ENSMUSG00000000811 405 0.808 - - - - 0.808 - thioredoxin reductase 3 [Source:MGI Symbol;Acc:MGI:2386711]
79. Acsl5 ENSMUSG00000024981 381 0.808 - - - - 0.808 - acyl-CoA synthetase long-chain family member 5 [Source:MGI Symbol;Acc:MGI:1919129]
80. Piga ENSMUSG00000031381 638 0.808 - - - - 0.808 - phosphatidylinositol glycan anchor biosynthesis, class A [Source:MGI Symbol;Acc:MGI:99461]
81. Klc2 ENSMUSG00000024862 582 0.808 - - - - 0.808 - kinesin light chain 2 [Source:MGI Symbol;Acc:MGI:107953]
82. Xpa ENSMUSG00000028329 718 0.808 - - - - 0.808 - xeroderma pigmentosum, complementation group A [Source:MGI Symbol;Acc:MGI:99135]
83. Sec14l2 ENSMUSG00000003585 109 0.808 - - - - 0.808 - SEC14-like lipid binding 2 [Source:MGI Symbol;Acc:MGI:1915065]
84. 2310039H08Rik ENSMUSG00000062619 996 0.808 - - - - 0.808 - RIKEN cDNA 2310039H08 gene [Source:MGI Symbol;Acc:MGI:1914351]
85. Xpc ENSMUSG00000030094 530 0.807 - - - - 0.807 - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
86. Ptges2 ENSMUSG00000026820 419 0.807 - - - - 0.807 - prostaglandin E synthase 2 [Source:MGI Symbol;Acc:MGI:1917592]
87. Ldb3 ENSMUSG00000021798 170 0.807 - - - - 0.807 - LIM domain binding 3 [Source:MGI Symbol;Acc:MGI:1344412]
88. Rnaseh2a ENSMUSG00000052926 1911 0.807 - - - - 0.807 - ribonuclease H2, large subunit [Source:MGI Symbol;Acc:MGI:1916974]
89. Gm23913 Gm23913 84 0.806 - - - - 0.806 -
90. 5730455P16Rik ENSMUSG00000057181 986 0.805 - - - - 0.805 - RIKEN cDNA 5730455P16 gene [Source:MGI Symbol;Acc:MGI:1917841]
91. Ccdc177 ENSMUSG00000062961 159 0.805 - - - - 0.805 - coiled-coil domain containing 177 [Source:MGI Symbol;Acc:MGI:2686414]
92. Pan2 ENSMUSG00000005682 912 0.804 - - - - 0.804 - PAN2 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1918984]
93. Rsbn1l ENSMUSG00000039968 1779 0.803 - - - - 0.803 - round spermatid basic protein 1-like [Source:MGI Symbol;Acc:MGI:3036237]
94. Fkbp11 ENSMUSG00000003355 578 0.802 - - - - 0.802 - FK506 binding protein 11 [Source:MGI Symbol;Acc:MGI:1913370]
95. Sgsm3 ENSMUSG00000042303 608 0.801 - - - - 0.801 - small G protein signaling modulator 3 [Source:MGI Symbol;Acc:MGI:1916329]
96. Ddx27 ENSMUSG00000017999 1798 0.801 - - - - 0.801 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:MGI Symbol;Acc:MGI:2385884]
97. Slc25a22 ENSMUSG00000019082 749 0.8 - - - - 0.800 - solute carrier family 25 (mitochondrial carrier, glutamate), member 22 [Source:MGI Symbol;Acc:MGI:1915517]
98. Crem ENSMUSG00000063889 328 0.8 - - - - 0.800 - cAMP responsive element modulator [Source:MGI Symbol;Acc:MGI:88495]
99. Col18a1 ENSMUSG00000001435 4894 0.8 - - - - 0.800 - collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]
100. Ppm1f ENSMUSG00000026181 531 0.8 - - - - 0.800 - protein phosphatase 1F (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:1918464]

There are 215 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA