Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Usb1

Gene Name Gene ID Reads Annotation
Usb1 ENSMUSG00000031792 470 U6 snRNA biogenesis 1 [Source:MGI Symbol;Acc:MGI:2142454]







Genes with expression patterns similar to Usb1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Usb1 ENSMUSG00000031792 470 6 1.000 1.000 1.000 1.000 1.000 1.000 U6 snRNA biogenesis 1 [Source:MGI Symbol;Acc:MGI:2142454]
2. Anks1 ENSMUSG00000024219 2498 0.973 - 0.973 - - - - ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
3. Sh3yl1 ENSMUSG00000020669 209 0.971 - 0.971 - - - - Sh3 domain YSC-like 1 [Source:MGI Symbol;Acc:MGI:1346118]
4. AA465934 ENSMUSG00000093483 144 0.971 - 0.971 - - - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
5. Fam151b ENSMUSG00000034334 2211 0.97 - 0.970 - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
6. Rnpc3 ENSMUSG00000027981 855 0.97 - 0.970 - - - - RNA-binding region (RNP1, RRM) containing 3 [Source:MGI Symbol;Acc:MGI:1914475]
7. Slc25a32 ENSMUSG00000022299, ENSMUSG00000107007 146 0.97 - 0.970 - - - - solute carrier family 25, member 32 [Source:MGI Symbol;Acc:MGI:1917156]
8. Atp6v0a2 ENSMUSG00000038023 268 0.97 - 0.970 - - - - ATPase, H+ transporting, lysosomal V0 subunit A2 [Source:MGI Symbol;Acc:MGI:104855]
9. St3gal4 ENSMUSG00000032038 227 0.97 - 0.970 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:1316743]
10. Spon2 ENSMUSG00000037379 204 0.969 - 0.969 - - - - spondin 2, extracellular matrix protein [Source:MGI Symbol;Acc:MGI:1923724]
11. Rhod ENSMUSG00000041845 571 0.969 - 0.969 - - - - ras homolog family member D [Source:MGI Symbol;Acc:MGI:108446]
12. 2310014L17Rik 2310014L17Rik 153 0.969 - 0.969 - - - -
13. Aarsd1 ENSMUSG00000075528 70 0.968 - 0.968 - - - - alanyl-tRNA synthetase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916934]
14. Aspa ENSMUSG00000020774 50 0.968 - 0.968 - - - - aspartoacylase [Source:MGI Symbol;Acc:MGI:87914]
15. Hpse ENSMUSG00000035273 197 0.968 - 0.968 - - - - heparanase [Source:MGI Symbol;Acc:MGI:1343124]
16. 3110099E03Rik ENSMUSG00000085582 57 0.967 - 0.967 - - - - RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
17. Stambpl1 ENSMUSG00000024776 130 0.967 - 0.967 - - - - STAM binding protein like 1 [Source:MGI Symbol;Acc:MGI:1923880]
18. Lox ENSMUSG00000024529 219 0.967 - 0.967 - - - - lysyl oxidase [Source:MGI Symbol;Acc:MGI:96817]
19. Zfp819 ENSMUSG00000055102 59 0.964 - 0.964 - - - - zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]
20. Irs1 ENSMUSG00000055980 207 0.964 - 0.964 - - - - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
21. Efemp2 ENSMUSG00000024909 777 0.964 - 0.964 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
22. 4933404O12Rik ENSMUSG00000097908 302 0.964 - 0.964 - - - - RIKEN cDNA 4933404O12 gene [Source:MGI Symbol;Acc:MGI:1914002]
23. Gm12840 ENSMUSG00000086320 98 0.964 - 0.964 - - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
24. Xpc ENSMUSG00000030094 530 0.963 - 0.963 - - - - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
25. Gm4258 ENSMUSG00000098243 99 0.963 - 0.963 - - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
26. Pax5 ENSMUSG00000014030 74 0.962 - 0.962 - - - - paired box 5 [Source:MGI Symbol;Acc:MGI:97489]
27. Nudt11 ENSMUSG00000073295 757 0.962 - 0.962 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
28. Efs ENSMUSG00000022203 645 0.962 - 0.962 - - - - embryonal Fyn-associated substrate [Source:MGI Symbol;Acc:MGI:105311]
29. Gm3695 ENSMUSG00000067224 120 0.961 - 0.961 - - - - predicted gene 3695 [Source:MGI Symbol;Acc:MGI:3781871]
30. Kcnk1 ENSMUSG00000033998 256 0.961 - 0.961 - - - - potassium channel, subfamily K, member 1 [Source:MGI Symbol;Acc:MGI:109322]
31. Zfp36 ENSMUSG00000044786 157 0.961 - 0.961 - - - - zinc finger protein 36 [Source:MGI Symbol;Acc:MGI:99180]
32. Zfp428 ENSMUSG00000064264 966 0.96 - 0.960 - - - - zinc finger protein 428 [Source:MGI Symbol;Acc:MGI:1916463]
33. Ndfip1 ENSMUSG00000024425 231 0.96 - 0.960 - - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
34. Gskip ENSMUSG00000044715 985 0.96 - 0.960 - - - - GSK3B interacting protein [Source:MGI Symbol;Acc:MGI:1914037]
35. Gm14843 ENSMUSG00000083897 219 0.958 - 0.958 - - - - predicted gene 14843 [Source:MGI Symbol;Acc:MGI:3802062]
36. Sgsm2 ENSMUSG00000038351 512 0.958 - 0.958 - - - - small G protein signaling modulator 2 [Source:MGI Symbol;Acc:MGI:2144695]
37. Gm21596 ENSMUSG00000096006 743 0.957 - 0.957 - - - - predicted gene, 21596 [Source:MGI Symbol;Acc:MGI:5434951]
38. Nfatc2ip ENSMUSG00000030722 920 0.957 - 0.957 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
39. Malt1 ENSMUSG00000032688 329 0.956 - 0.956 - - - - MALT1 paracaspase [Source:MGI Symbol;Acc:MGI:2445027]
40. Zbtb41 ENSMUSG00000033964 787 0.956 - 0.956 - - - - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
41. Rgl1 ENSMUSG00000026482 938 0.956 - 0.956 - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
42. Nid2 ENSMUSG00000021806 452 0.955 - 0.955 - - - - nidogen 2 [Source:MGI Symbol;Acc:MGI:1298229]
43. Tpmt ENSMUSG00000021376 544 0.952 - 0.952 - - - - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
44. Pomk ENSMUSG00000037251 373 0.952 - 0.952 - - - - protein-O-mannose kinase [Source:MGI Symbol;Acc:MGI:1921903]
45. Mlx ENSMUSG00000017801 376 0.951 - 0.951 - - - - MAX-like protein X [Source:MGI Symbol;Acc:MGI:108398]
46. Timm23 ENSMUSG00000013701 439 0.951 - 0.951 - - - - translocase of inner mitochondrial membrane 23 [Source:MGI Symbol;Acc:MGI:1858317]
47. Rnf19a ENSMUSG00000022280 802 0.95 - 0.950 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
48. Slc9a8 ENSMUSG00000039463 761 0.95 - 0.950 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:MGI Symbol;Acc:MGI:1924281]
49. Arnt ENSMUSG00000015522 777 0.95 - 0.950 - - - - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
50. Tex10 ENSMUSG00000028345 705 0.95 - 0.950 - - - - testis expressed gene 10 [Source:MGI Symbol;Acc:MGI:1344413]
51. Pdcd2 ENSMUSG00000014771 871 0.949 - 0.949 - - - - programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
52. Tbc1d9 ENSMUSG00000031709 688 0.949 - 0.949 - - - - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
53. Npc1 ENSMUSG00000024413 973 0.948 - 0.948 - - - - NPC intracellular cholesterol transporter 1 [Source:MGI Symbol;Acc:MGI:1097712]
54. Tmem203 ENSMUSG00000078201 356 0.948 - 0.948 - - - - transmembrane protein 203 [Source:MGI Symbol;Acc:MGI:2443597]
55. Gm12088 ENSMUSG00000086707 296 0.948 - 0.948 - - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
56. Snx33 ENSMUSG00000032733 589 0.948 - 0.948 - - - - sorting nexin 33 [Source:MGI Symbol;Acc:MGI:2443239]
57. Atrip ENSMUSG00000025646 321 0.947 - 0.947 - - - - ATR interacting protein [Source:MGI Symbol;Acc:MGI:1925349]
58. Gm22662 ENSMUSG00000093031 187 0.947 - 0.947 - - - - predicted gene, 22662 [Source:MGI Symbol;Acc:MGI:5452439]
59. 2310047M10Rik 2310047M10Rik 249 0.944 - 0.944 - - - -
60. Cmah ENSMUSG00000016756 641 0.944 - 0.944 - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:MGI Symbol;Acc:MGI:103227]
61. Mtus1 ENSMUSG00000045636 912 0.944 - 0.944 - - - - mitochondrial tumor suppressor 1 [Source:MGI Symbol;Acc:MGI:2142572]
62. Hps4 ENSMUSG00000042328 481 0.943 - 0.943 - - - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:MGI Symbol;Acc:MGI:2177742]
63. Mettl2 ENSMUSG00000020691 572 0.943 - 0.943 - - - - methyltransferase like 2 [Source:MGI Symbol;Acc:MGI:1289171]
64. 4933426M11Rik 4933426M11Rik 441 0.943 - 0.943 - - - -
65. Acer3 ENSMUSG00000030760 598 0.942 - 0.942 - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
66. Pank2 ENSMUSG00000037514 1182 0.942 - 0.942 - - - - pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
67. Impa2 ENSMUSG00000024525 709 0.942 - 0.942 - - - - inositol (myo)-1(or 4)-monophosphatase 2 [Source:MGI Symbol;Acc:MGI:2149728]
68. Gm20498 ENSMUSG00000021139 663 0.942 - 0.942 - - - - predicted gene 20498 [Source:MGI Symbol;Acc:MGI:5141963]
69. Coq10b ENSMUSG00000025981 471 0.942 - 0.942 - - - - coenzyme Q10B [Source:MGI Symbol;Acc:MGI:1915126]
70. Ankrd29 ENSMUSG00000057766 352 0.941 - 0.941 - - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
71. D130007C19Rik ENSMUSG00000054304 661 0.94 - 0.940 - - - - RIKEN cDNA D130007C19 gene [Source:MGI Symbol;Acc:MGI:3045257]
72. Tmem39b ENSMUSG00000053730 808 0.94 - 0.940 - - - - transmembrane protein 39b [Source:MGI Symbol;Acc:MGI:2682939]
73. Zfp384 ENSMUSG00000038346 1875 0.938 - 0.938 - - - - zinc finger protein 384 [Source:MGI Symbol;Acc:MGI:2443203]
74. Zfc3h1 ENSMUSG00000034163 1104 0.937 - 0.937 - - - - zinc finger, C3H1-type containing [Source:MGI Symbol;Acc:MGI:2446143]
75. Zkscan5 ENSMUSG00000055991 579 0.937 - 0.937 - - - - zinc finger with KRAB and SCAN domains 5 [Source:MGI Symbol;Acc:MGI:107533]
76. Trim39 ENSMUSG00000045409 968 0.935 - 0.935 - - - - tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
77. Leprel2 Leprel2 1004 0.935 - 0.935 - - - -
78. Zfp518a ENSMUSG00000049164 1198 0.935 - 0.935 - - - - zinc finger protein 518A [Source:MGI Symbol;Acc:MGI:1919922]
79. H2afj ENSMUSG00000060032 2159 0.934 - 0.934 - - - - H2A histone family, member J [Source:MGI Symbol;Acc:MGI:3606192]
80. Acy1 ENSMUSG00000023262 490 0.933 - 0.933 - - - - aminoacylase 1 [Source:MGI Symbol;Acc:MGI:87913]
81. Bag2 ENSMUSG00000042215 801 0.932 - 0.932 - - - - BCL2-associated athanogene 2 [Source:MGI Symbol;Acc:MGI:1891254]
82. Pde4dip ENSMUSG00000038170 727 0.932 - 0.932 - - - - phosphodiesterase 4D interacting protein (myomegalin) [Source:MGI Symbol;Acc:MGI:1891434]
83. Bbs2 ENSMUSG00000031755 976 0.932 - 0.932 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
84. Plxna3 ENSMUSG00000031398 910 0.931 - 0.931 - - - - plexin A3 [Source:MGI Symbol;Acc:MGI:107683]
85. Shisa5 ENSMUSG00000025647 1562 0.93 - 0.930 - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
86. Zfp120 ENSMUSG00000068134 814 0.93 - 0.930 - - - - zinc finger protein 120 [Source:MGI Symbol;Acc:MGI:1345179]
87. Pcna-ps2 ENSMUSG00000067608 627 0.93 - 0.930 - - - - proliferating cell nuclear antigen pseudogene 2 [Source:MGI Symbol;Acc:MGI:97505]
88. Kif26b ENSMUSG00000026494 872 0.93 - 0.930 - - - - kinesin family member 26B [Source:MGI Symbol;Acc:MGI:2447076]
89. Ppm1d ENSMUSG00000020525 1303 0.929 - 0.929 - - - - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
90. Cyth3 ENSMUSG00000018001 1113 0.929 - 0.929 - - - - cytohesin 3 [Source:MGI Symbol;Acc:MGI:1335107]
91. Nsun5 ENSMUSG00000000916 534 0.929 - 0.929 - - - - NOL1/NOP2/Sun domain family, member 5 [Source:MGI Symbol;Acc:MGI:2140844]
92. Tsr1 ENSMUSG00000038335 1073 0.929 - 0.929 - - - - TSR1 20S rRNA accumulation [Source:MGI Symbol;Acc:MGI:2144566]
93. Bola3 ENSMUSG00000045160 1800 0.929 - 0.929 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
94. Cdc73 ENSMUSG00000026361 2326 0.926 - 0.926 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2384876]
95. Nup37 ENSMUSG00000035351 2174 0.925 - 0.925 - - - - nucleoporin 37 [Source:MGI Symbol;Acc:MGI:1919964]
96. Avl9 ENSMUSG00000029787 1346 0.925 - 0.925 - - - - AVL9 cell migration associated [Source:MGI Symbol;Acc:MGI:1926187]
97. Mir296 ENSMUSG00000065521 1110 0.922 - 0.922 - - - - microRNA 296 [Source:MGI Symbol;Acc:MGI:3619269]
98. Dvl3 ENSMUSG00000003233 353 0.922 - 0.922 - - - - dishevelled segment polarity protein 3 [Source:MGI Symbol;Acc:MGI:108100]
99. Ift81 ENSMUSG00000029469 806 0.921 - 0.921 - - - - intraflagellar transport 81 [Source:MGI Symbol;Acc:MGI:1098597]
100. Ncoa1 ENSMUSG00000020647 816 0.92 - 0.920 - - - - nuclear receptor coactivator 1 [Source:MGI Symbol;Acc:MGI:1276523]

There are 333 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA