Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Urb1

Gene Name Gene ID Reads Annotation
Urb1 ENSMUSG00000039929 450 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2146468]







Genes with expression patterns similar to Urb1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Urb1 ENSMUSG00000039929 450 6 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2146468]
2. Zfp385b ENSMUSG00000027016 82 0.895 - - - - 0.895 - zinc finger protein 385B [Source:MGI Symbol;Acc:MGI:2444734]
3. 2900026A02Rik ENSMUSG00000051339 391 0.882 - - - - 0.882 - RIKEN cDNA 2900026A02 gene [Source:MGI Symbol;Acc:MGI:1920194]
4. Dmbx1 ENSMUSG00000028707 18 0.872 - - - - 0.872 - diencephalon/mesencephalon homeobox 1 [Source:MGI Symbol;Acc:MGI:2153518]
5. Stam2 ENSMUSG00000055371 1123 0.871 - - - - 0.871 - signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 [Source:MGI Symbol;Acc:MGI:1929100]
6. Gm5937 ENSMUSG00000081622 17 0.869 - - - - 0.869 - predicted gene 5937 [Source:MGI Symbol;Acc:MGI:3648844]
7. 2510046G10Rik ENSMUSG00000066175 41 0.867 - - - - 0.867 - RIKEN cDNA 2510046G10 gene [Source:MGI Symbol;Acc:MGI:3698051]
8. Snora15 ENSMUSG00000093413 13 0.866 - - - - 0.866 - small nucleolar RNA, H/ACA box 15 [Source:MGI Symbol;Acc:MGI:3819490]
9. Gm17034 ENSMUSG00000090293 10 0.866 - - - - 0.866 - predicted gene 17034 [Source:MGI Symbol;Acc:MGI:4937861]
10. Gm6155 ENSMUSG00000068629 16 0.866 - - - - 0.866 - predicted pseudogene 6155 [Source:MGI Symbol;Acc:MGI:3643981]
11. 5730460C07Rik ENSMUSG00000062046 10 0.866 - - - - 0.866 - RIKEN cDNA 5730460C07 gene [Source:MGI Symbol;Acc:MGI:1917844]
12. Gm15905 ENSMUSG00000085993 17 0.865 - - - - 0.865 - predicted gene 15905 [Source:MGI Symbol;Acc:MGI:3802059]
13. 4930430E12Rik ENSMUSG00000085295 30 0.864 - - - - 0.864 - RIKEN cDNA 4930430E12 gene [Source:MGI Symbol;Acc:MGI:1918889]
14. Gm7429 ENSMUSG00000082260 31 0.862 - - - - 0.862 - predicted pseudogene 7429 [Source:MGI Symbol;Acc:MGI:3647718]
15. Hist1h2ab ENSMUSG00000061615 94 0.862 - - - - 0.862 - histone cluster 1, H2ab [Source:MGI Symbol;Acc:MGI:2448306]
16. Htr3b ENSMUSG00000008590 22 0.861 - - - - 0.861 - 5-hydroxytryptamine (serotonin) receptor 3B [Source:MGI Symbol;Acc:MGI:1861899]
17. Diras2 ENSMUSG00000047842 90 0.861 - - - - 0.861 - DIRAS family, GTP-binding RAS-like 2 [Source:MGI Symbol;Acc:MGI:1915453]
18. Foxr1 ENSMUSG00000074397 30 0.86 - - - - 0.860 - forkhead box R1 [Source:MGI Symbol;Acc:MGI:2685961]
19. Cd79a ENSMUSG00000003379 33 0.86 - - - - 0.860 - CD79A antigen (immunoglobulin-associated alpha) [Source:MGI Symbol;Acc:MGI:101774]
20. Cd37 ENSMUSG00000030798 29 0.86 - - - - 0.860 - CD37 antigen [Source:MGI Symbol;Acc:MGI:88330]
21. 2310042E22Rik 2310042E22Rik 17 0.86 - - - - 0.860 -
22. Snta1 ENSMUSG00000027488 128 0.858 - - - - 0.858 - syntrophin, acidic 1 [Source:MGI Symbol;Acc:MGI:101772]
23. Kcnn2 ENSMUSG00000054477 37 0.857 - - - - 0.857 - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 [Source:MGI Symbol;Acc:MGI:2153182]
24. 6530401F13Rik ENSMUSG00000091947 13 0.856 - - - - 0.856 - RIKEN cDNA 6530401F13 gene [Source:MGI Symbol;Acc:MGI:1923491]
25. Gm9530 ENSMUSG00000096950 38 0.856 - - - - 0.856 - predicted gene 9530 [Source:MGI Symbol;Acc:MGI:3779939]
26. Ttll9 ENSMUSG00000074673 21 0.856 - - - - 0.856 - tubulin tyrosine ligase-like family, member 9 [Source:MGI Symbol;Acc:MGI:1913589]
27. Sorcs3 ENSMUSG00000063434 109 0.853 - - - - 0.853 - sortilin-related VPS10 domain containing receptor 3 [Source:MGI Symbol;Acc:MGI:1913923]
28. Lmbrd2 ENSMUSG00000039704, ENSMUSG00000116236 49 0.851 - - - - 0.851 - LMBR1 domain containing 2 [Source:NCBI gene;Acc:320506]
29. Gm9797 ENSMUSG00000045455 43 0.85 - - - - 0.850 - predicted pseudogene 9797 [Source:MGI Symbol;Acc:MGI:3704349]
30. Csn3 ENSMUSG00000001622 90 0.848 - - - - 0.848 - casein kappa [Source:MGI Symbol;Acc:MGI:107461]
31. Ephx2 ENSMUSG00000022040 157 0.847 - - - - 0.847 - epoxide hydrolase 2, cytoplasmic [Source:MGI Symbol;Acc:MGI:99500]
32. Rhpn1 ENSMUSG00000022580 76 0.843 - - - - 0.843 - rhophilin, Rho GTPase binding protein 1 [Source:MGI Symbol;Acc:MGI:1098783]
33. 1810014B01Rik ENSMUSG00000097412 129 0.843 - - - - 0.843 - RIKEN cDNA 1810014B01 gene [Source:MGI Symbol;Acc:MGI:1913513]
34. Ppp3r2 ENSMUSG00000028310 20 0.842 - - - - 0.842 - protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type II) [Source:MGI Symbol;Acc:MGI:107171]
35. Phf1 ENSMUSG00000024193 65 0.841 - - - - 0.841 - PHD finger protein 1 [Source:MGI Symbol;Acc:MGI:98647]
36. Foxq1 ENSMUSG00000038415 197 0.84 - - - - 0.840 - forkhead box Q1 [Source:MGI Symbol;Acc:MGI:1298228]
37. 2010012P19Rik 2010012P19Rik 39 0.84 - - - - 0.840 -
38. Fam83g ENSMUSG00000042377 44 0.839 - - - - 0.839 - family with sequence similarity 83, member G [Source:MGI Symbol;Acc:MGI:1916890]
39. Gm22388 ENSMUSG00000088819 259 0.836 - - - - 0.836 - predicted gene, 22388 [Source:MGI Symbol;Acc:MGI:5452165]
40. Lnp 1121 0.835 - - - - 0.835 - limb and neural patterns, transcript variant X4
41. 2210417K05Rik 2210417K05Rik 42 0.834 - - - - 0.834 -
42. Ntsr1 ENSMUSG00000027568 69 0.834 - - - - 0.834 - neurotensin receptor 1 [Source:MGI Symbol;Acc:MGI:97386]
43. Mfsd7b 498 0.833 - - - - 0.833 - major facilitator superfamily domain containing 7B, transcript variant X1
44. Supt7l ENSMUSG00000053134 685 0.83 - - - - 0.830 - suppressor of Ty 7-like [Source:MGI Symbol;Acc:MGI:1919445]
45. Gm10719 ENSMUSG00000095547 349 0.83 - - - - 0.830 - predicted gene 10719 [Source:MGI Symbol;Acc:MGI:3641690]
46. Ctla2b ENSMUSG00000074874 66 0.83 - - - - 0.830 - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
47. Itga3 ENSMUSG00000001507 405 0.825 - - - - 0.825 - integrin alpha 3 [Source:MGI Symbol;Acc:MGI:96602]
48. Rps6ka5 ENSMUSG00000021180 94 0.822 - - - - 0.822 - ribosomal protein S6 kinase, polypeptide 5 [Source:MGI Symbol;Acc:MGI:1920336]
49. 2010015M23Rik ENSMUSG00000096983, ENSMUSG00000102444 131 0.819 - - - - 0.819 - RIKEN cDNA 2010015M23 gene [Source:MGI Symbol;Acc:MGI:1919337]
50. 5430403G16Rik ENSMUSG00000072763 285 0.819 - - - - 0.819 - RIKEN cDNA 5430403G16 gene [Source:MGI Symbol;Acc:MGI:1924450]
51. A430106G13Rik ENSMUSG00000098206 93 0.819 - - - - 0.819 - RIKEN cDNA A430106G13 gene [Source:MGI Symbol;Acc:MGI:2443823]
52. Agtr1a ENSMUSG00000049115 80 0.819 - - - - 0.819 - angiotensin II receptor, type 1a [Source:MGI Symbol;Acc:MGI:87964]
53. Itga4 ENSMUSG00000027009 912 0.815 - - - - 0.815 - integrin alpha 4 [Source:MGI Symbol;Acc:MGI:96603]
54. Gm7976 ENSMUSG00000097551 58 0.814 - - - - 0.814 - predicted gene 7976 [Source:MGI Symbol;Acc:MGI:3644736]
55. 1700049G17Rik 282 0.813 - - - - 0.813 - RIKEN cDNA 1700049G17 gene
56. Gm8991 ENSMUSG00000059179 90 0.811 - - - - 0.811 - predicted pseudogene 8991 [Source:MGI Symbol;Acc:MGI:3644227]
57. Gm7452 ENSMUSG00000107310 296 0.805 - - - - 0.805 - predicted pseudogene 7452 [Source:MGI Symbol;Acc:MGI:3645151]
58. Phf15 Phf15 132 0.804 - - - - 0.804 -
59. F10 ENSMUSG00000031444 51 0.804 - - - - 0.804 - coagulation factor X [Source:MGI Symbol;Acc:MGI:103107]
60. Opn3 ENSMUSG00000026525 210 0.804 - - - - 0.804 - opsin 3 [Source:MGI Symbol;Acc:MGI:1338022]
61. Grin2d ENSMUSG00000002771 119 0.802 - - - - 0.802 - glutamate receptor, ionotropic, NMDA2D (epsilon 4) [Source:MGI Symbol;Acc:MGI:95823]
62. Pmm2 ENSMUSG00000022711 580 0.8 - - - - 0.800 - phosphomannomutase 2 [Source:MGI Symbol;Acc:MGI:1859214]
63. 2510002D24Rik ENSMUSG00000071632 411 0.8 - - - - 0.800 - RIKEN cDNA 2510002D24 gene [Source:MGI Symbol;Acc:MGI:1919557]
64. Esco1 ENSMUSG00000024293 313 0.799 - - - - 0.799 - establishment of sister chromatid cohesion N-acetyltransferase 1 [Source:MGI Symbol;Acc:MGI:1925055]
65. Ogfod2 ENSMUSG00000023707 139 0.799 - - - - 0.799 - 2-oxoglutarate and iron-dependent oxygenase domain containing 2 [Source:MGI Symbol;Acc:MGI:1913877]
66. Plk2 ENSMUSG00000021701 1249 0.798 - - - - 0.798 - polo like kinase 2 [Source:MGI Symbol;Acc:MGI:1099790]
67. Cdadc1 ENSMUSG00000021982 515 0.796 - - - - 0.796 - cytidine and dCMP deaminase domain containing 1 [Source:MGI Symbol;Acc:MGI:1919141]
68. Wnt9a ENSMUSG00000000126 90 0.795 - - - - 0.795 - wingless-type MMTV integration site family, member 9A [Source:MGI Symbol;Acc:MGI:2446084]
69. Dnajc28 ENSMUSG00000039763 124 0.795 - - - - 0.795 - DnaJ heat shock protein family (Hsp40) member C28 [Source:MGI Symbol;Acc:MGI:2181053]
70. Fam71e1 ENSMUSG00000051113 33 0.794 - - - - 0.794 - family with sequence similarity 71, member E1 [Source:MGI Symbol;Acc:MGI:1922788]
71. Gm15915 ENSMUSG00000085723 101 0.792 - - - - 0.792 - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
72. Arv1 ENSMUSG00000031982 331 0.79 - - - - 0.790 - ARV1 homolog, fatty acid homeostasis modulator [Source:MGI Symbol;Acc:MGI:1916115]
73. Ppfia2 ENSMUSG00000053825 97 0.784 - - - - 0.784 - protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:MGI Symbol;Acc:MGI:2443834]
74. Dus1l ENSMUSG00000025155 491 0.783 - - - - 0.783 - dihydrouridine synthase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1915980]
75. Dnajc14 ENSMUSG00000025354 169 0.782 - - - - 0.782 - DnaJ heat shock protein family (Hsp40) member C14 [Source:MGI Symbol;Acc:MGI:1921580]
76. Irs1 ENSMUSG00000055980 207 0.781 - - - - 0.781 - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
77. Metrnl ENSMUSG00000039208 66 0.781 - - - - 0.781 - meteorin, glial cell differentiation regulator-like [Source:MGI Symbol;Acc:MGI:2384806]
78. AI413582 ENSMUSG00000062753 316 0.779 - - - - 0.779 - expressed sequence AI413582 [Source:MGI Symbol;Acc:MGI:2146839]
79. Zkscan6 ENSMUSG00000018347 182 0.778 - - - - 0.778 - zinc finger with KRAB and SCAN domains 6 [Source:MGI Symbol;Acc:MGI:1289293]
80. Rpp40 ENSMUSG00000021418 492 0.778 - - - - 0.778 - ribonuclease P 40 subunit [Source:MGI Symbol;Acc:MGI:1346084]
81. Gm9294 ENSMUSG00000044609 103 0.775 - - - - 0.775 - predicted pseudogene 9294 [Source:MGI Symbol;Acc:MGI:3648888]
82. Ccs ENSMUSG00000034108 558 0.775 - - - - 0.775 - copper chaperone for superoxide dismutase [Source:MGI Symbol;Acc:MGI:1333783]
83. Lrrc32 ENSMUSG00000090958 175 0.774 - - - - 0.774 - leucine rich repeat containing 32 [Source:MGI Symbol;Acc:MGI:93882]
84. Rbm12b1 ENSMUSG00000046667 331 0.773 - - - - 0.773 - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
85. Gpr20 ENSMUSG00000045281 159 0.772 - - - - 0.772 - G protein-coupled receptor 20 [Source:MGI Symbol;Acc:MGI:2441803]
86. Cib2 ENSMUSG00000037493 166 0.771 - - - - 0.771 - calcium and integrin binding family member 2 [Source:MGI Symbol;Acc:MGI:1929293]
87. 5730577I03Rik 5730577I03Rik 79 0.77 - - - - 0.770 -
88. Zbtb45 ENSMUSG00000049600 428 0.77 - - - - 0.770 - zinc finger and BTB domain containing 45 [Source:MGI Symbol;Acc:MGI:2685003]
89. Nagpa ENSMUSG00000023143 576 0.766 - - - - 0.766 - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:MGI Symbol;Acc:MGI:1351598]
90. Itpr2 ENSMUSG00000030287 360 0.765 - - - - 0.765 - inositol 1,4,5-triphosphate receptor 2 [Source:MGI Symbol;Acc:MGI:99418]
91. Uba6 ENSMUSG00000035898 1221 0.763 - - - - 0.763 - ubiquitin-like modifier activating enzyme 6 [Source:MGI Symbol;Acc:MGI:1913894]
92. Lancl2 ENSMUSG00000062190 1206 0.76 - - - - 0.760 - LanC (bacterial lantibiotic synthetase component C)-like 2 [Source:MGI Symbol;Acc:MGI:1919085]
93. Arhgap25 ENSMUSG00000030047 123 0.759 - - - - 0.759 - Rho GTPase activating protein 25 [Source:MGI Symbol;Acc:MGI:2443687]
94. Socs1 ENSMUSG00000038037 487 0.758 - - - - 0.758 - suppressor of cytokine signaling 1 [Source:MGI Symbol;Acc:MGI:1354910]
95. Rnu11 ENSMUSG00000077323 50 0.756 - - - - 0.756 - U11 small nuclear RNA [Source:MGI Symbol;Acc:MGI:2148804]
96. Dhrs7 ENSMUSG00000021094 222 0.754 - - - - 0.754 - dehydrogenase/reductase (SDR family) member 7 [Source:MGI Symbol;Acc:MGI:1913625]
97. Mettl10 906 0.754 - - - - 0.754 - methyltransferase like 10, transcript variant X5
98. Zfp758 ENSMUSG00000044501 264 0.752 - - - - 0.752 - zinc finger protein 758 [Source:MGI Symbol;Acc:MGI:2385044]
99. Mpv17l2 ENSMUSG00000035559, ENSMUSG00000111476 271 0.752 - - - - 0.752 - MPV17 mitochondrial membrane protein-like 2 [Source:MGI Symbol;Acc:MGI:2681846]
100. Arel1 ENSMUSG00000042350 184 0.752 - - - - 0.752 - apoptosis resistant E3 ubiquitin protein ligase 1 [Source:MGI Symbol;Acc:MGI:1915747]

There are 50 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA