Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Upf2

Gene Name Gene ID Reads Annotation
Upf2 ENSMUSG00000043241 1962 UPF2 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:2449307]







Genes with expression patterns similar to Upf2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Upf2 ENSMUSG00000043241 1962 6 1.000 1.000 1.000 1.000 1.000 1.000 UPF2 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:2449307]
2. Ythdf1 ENSMUSG00000038848 7664 0.824 0.824 - - - - - YTH domain family 1 [Source:MGI Symbol;Acc:MGI:1917431]
3. Notch3 ENSMUSG00000038146 7232 0.801 0.801 - - - - - notch 3 [Source:MGI Symbol;Acc:MGI:99460]
4. Stk24 ENSMUSG00000063410 2458 0.795 0.795 - - - - - serine/threonine kinase 24 [Source:MGI Symbol;Acc:MGI:2385007]
5. Ndufaf6 ENSMUSG00000050323 1262 0.795 0.795 - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 6 [Source:MGI Symbol;Acc:MGI:1924197]
6. Sema6d ENSMUSG00000027200 1413 0.793 0.793 - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
7. Epc2 ENSMUSG00000069495 1867 0.791 0.791 - - - - - enhancer of polycomb homolog 2 [Source:MGI Symbol;Acc:MGI:1278321]
8. Bscl2 ENSMUSG00000071657 1974 0.789 0.789 - - - - - Berardinelli-Seip congenital lipodystrophy 2 (seipin) [Source:MGI Symbol;Acc:MGI:1298392]
9. Gpx7 ENSMUSG00000028597 721 0.782 0.782 - - - - - glutathione peroxidase 7 [Source:MGI Symbol;Acc:MGI:1914555]
10. Vimp 1184 0.78 0.780 - - - - - VCP-interacting membrane protein
11. Gm12469 ENSMUSG00000083624 31 0.771 - - - - 0.771 - predicted gene 12469 [Source:MGI Symbol;Acc:MGI:3652114]
12. Gm26869 ENSMUSG00000097879 104 0.767 - - - - 0.767 - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
13. Ggn ENSMUSG00000031493 13 0.766 - - - - 0.766 - gametogenetin [Source:MGI Symbol;Acc:MGI:2181461]
14. Dnlz ENSMUSG00000075467 1790 0.764 0.764 - - - - - DNL-type zinc finger [Source:MGI Symbol;Acc:MGI:106559]
15. Cmtm2a ENSMUSG00000074127 8 0.762 - - - - 0.762 - CKLF-like MARVEL transmembrane domain containing 2A [Source:MGI Symbol;Acc:MGI:2447160]
16. Gm26585 ENSMUSG00000097473 8 0.762 - - - - 0.762 - predicted gene, 26585 [Source:MGI Symbol;Acc:MGI:5477079]
17. Gm14542 ENSMUSG00000081220 10 0.762 - - - - 0.762 - predicted gene 14542 [Source:MGI Symbol;Acc:MGI:3705745]
18. Lrrc7 ENSMUSG00000028176 10 0.762 - - - - 0.762 - leucine rich repeat containing 7 [Source:MGI Symbol;Acc:MGI:2676665]
19. Gm5431 ENSMUSG00000058163, ENSMUSG00000116032, ENSMUSG00000116047 10 0.762 - - - - 0.762 - predicted gene 5431 [Source:NCBI gene;Acc:432555]
20. Asic5 ENSMUSG00000028008 7 0.762 - - - - 0.762 - acid-sensing (proton-gated) ion channel family member 5 [Source:MGI Symbol;Acc:MGI:1929259]
21. Gm14418 ENSMUSG00000078867 76 0.761 - - - - 0.761 - predicted gene 14418 [Source:MGI Symbol;Acc:MGI:3702408]
22. Gm8420 ENSMUSG00000072324 22 0.761 - - - - 0.761 - predicted gene 8420 [Source:MGI Symbol;Acc:MGI:3645594]
23. Cpsf3l 1764 0.76 0.760 - - - - - cleavage and polyadenylation specific factor 3-like, transcript variant X2
24. Gm22265 ENSMUSG00000094131 12 0.76 - - - - 0.760 - predicted gene, 22265 [Source:MGI Symbol;Acc:MGI:5452042]
25. G430049J08Rik ENSMUSG00000096528 73 0.759 - - - - 0.759 - RIKEN cDNA G430049J08 gene [Source:MGI Symbol;Acc:MGI:3645649]
26. Rhbdl2 ENSMUSG00000043333 22 0.758 - - - - 0.758 - rhomboid like 2 [Source:MGI Symbol;Acc:MGI:3608413]
27. Hopx ENSMUSG00000059325 75 0.758 - - - - 0.758 - HOP homeobox [Source:MGI Symbol;Acc:MGI:1916782]
28. BC055324 ENSMUSG00000041406 136 0.757 - - - - 0.757 - cDNA sequence BC055324 [Source:MGI Symbol;Acc:MGI:3590554]
29. 1700029I15Rik ENSMUSG00000044916 21 0.757 - - - - 0.757 - RIKEN cDNA 1700029I15 gene [Source:MGI Symbol;Acc:MGI:1916742]
30. Mthfsd ENSMUSG00000031816 2191 0.757 0.757 - - - - - methenyltetrahydrofolate synthetase domain containing [Source:MGI Symbol;Acc:MGI:2679252]
31. Ttc25 ENSMUSG00000006784 28 0.756 - - - - 0.756 - tetratricopeptide repeat domain 25 [Source:MGI Symbol;Acc:MGI:1921657]
32. Gm10167 ENSMUSG00000066554 67 0.756 - - - - 0.756 - predicted pseudogene 10167 [Source:MGI Symbol;Acc:MGI:3704263]
33. Ank2 ENSMUSG00000032826 2005 0.755 0.755 - - - - - ankyrin 2, brain [Source:MGI Symbol;Acc:MGI:88025]
34. Treml2 ENSMUSG00000071068, ENSMUSG00000116153 85 0.754 - - - - 0.754 - triggering receptor expressed on myeloid cells-like 2 [Source:MGI Symbol;Acc:MGI:2147038]
35. Gm24616 ENSMUSG00000065208 48 0.753 - - - - 0.753 - predicted gene, 24616 [Source:MGI Symbol;Acc:MGI:5454393]
36. Mapk7 ENSMUSG00000001034 2601 0.752 0.752 - - - - - mitogen-activated protein kinase 7 [Source:MGI Symbol;Acc:MGI:1346347]
37. Zfp689 ENSMUSG00000048921 105 0.751 0.751 - - - - - zinc finger protein 689 [Source:MGI Symbol;Acc:MGI:1918381]
38. Smim11 ENSMUSG00000051989 1776 0.751 0.751 - - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
39. Hist2h2bb ENSMUSG00000105827 20 0.75 - - - - 0.750 - histone cluster 2, H2bb [Source:MGI Symbol;Acc:MGI:2448413]
40. Gm9320 ENSMUSG00000100865 12 0.749 - - - - 0.749 - predicted gene 9320 [Source:MGI Symbol;Acc:MGI:3645000]
41. Ogfrl1 ENSMUSG00000026158 1984 0.748 0.748 - - - - - opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
42. Rfx8 ENSMUSG00000057173 12 0.747 - - - - 0.747 - regulatory factor X 8 [Source:MGI Symbol;Acc:MGI:3588206]
43. Dio3 ENSMUSG00000075707 50 0.747 - - - - 0.747 - deiodinase, iodothyronine type III [Source:MGI Symbol;Acc:MGI:1306782]
44. Hpcal4 ENSMUSG00000046093 25 0.747 - - - - 0.747 - hippocalcin-like 4 [Source:MGI Symbol;Acc:MGI:2157521]
45. Ttc6 ENSMUSG00000046782 54 0.746 - - - - 0.746 - tetratricopeptide repeat domain 6 [Source:MGI Symbol;Acc:MGI:2684915]
46. Ms4a4d ENSMUSG00000024678 17 0.745 - - - - 0.745 - membrane-spanning 4-domains, subfamily A, member 4D [Source:MGI Symbol;Acc:MGI:1913857]
47. Rassf6 ENSMUSG00000029370 22 0.745 - - - - 0.745 - Ras association (RalGDS/AF-6) domain family member 6 [Source:MGI Symbol;Acc:MGI:1920496]
48. Gm12992 ENSMUSG00000085667 38 0.744 - - - - 0.744 - predicted gene 12992 [Source:MGI Symbol;Acc:MGI:3702644]
49. Rinl ENSMUSG00000051735 71 0.744 - - - - 0.744 - Ras and Rab interactor-like [Source:MGI Symbol;Acc:MGI:2444024]
50. Ndel1 ENSMUSG00000018736 3400 0.743 0.743 - - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
51. Gm14494 ENSMUSG00000083097 42 0.743 - - - - 0.743 - predicted gene 14494 [Source:MGI Symbol;Acc:MGI:3704210]
52. Gm8172 ENSMUSG00000082926 64 0.743 - - - - 0.743 - predicted pseudogene 8172 [Source:MGI Symbol;Acc:MGI:3644930]
53. Dyx1c1 ENSMUSG00000092192 45 0.742 - - - - 0.742 - dyslexia susceptibility 1 candidate 1 [Source:MGI Symbol;Acc:MGI:1914935]
54. Atp7b ENSMUSG00000006567 86 0.74 - - - - 0.740 - ATPase, Cu++ transporting, beta polypeptide [Source:MGI Symbol;Acc:MGI:103297]
55. Gm15983 ENSMUSG00000087168 103 0.74 - - - - 0.740 - predicted gene 15983 [Source:MGI Symbol;Acc:MGI:3805549]
56. Izumo2 ENSMUSG00000066500 75 0.739 - - - - 0.739 - IZUMO family member 2 [Source:MGI Symbol;Acc:MGI:1922760]
57. Atad3a ENSMUSG00000029036 1530 0.739 0.739 - - - - - ATPase family, AAA domain containing 3A [Source:MGI Symbol;Acc:MGI:1919214]
58. Mtif2 ENSMUSG00000020459 1922 0.738 0.738 - - - - - mitochondrial translational initiation factor 2 [Source:MGI Symbol;Acc:MGI:1924034]
59. Ikbkap ENSMUSG00000028431 3290 0.737 0.737 - - - - - inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein [Source:MGI Symbol;Acc:MGI:1914544]
60. Creb3l2 ENSMUSG00000038648 1476 0.737 0.737 - - - - - cAMP responsive element binding protein 3-like 2 [Source:MGI Symbol;Acc:MGI:2442695]
61. Dytn ENSMUSG00000069085 45 0.737 - - - - 0.737 - dystrotelin [Source:MGI Symbol;Acc:MGI:2685061]
62. Mfsd1 ENSMUSG00000027775 1963 0.737 0.737 - - - - - major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
63. Proca1 ENSMUSG00000044122 39 0.736 - - - - 0.736 - protein interacting with cyclin A1 [Source:MGI Symbol;Acc:MGI:1918274]
64. Zfp369 ENSMUSG00000021514 1130 0.734 0.734 - - - - - zinc finger protein 369 [Source:MGI Symbol;Acc:MGI:2176229]
65. E130307A14Rik ENSMUSG00000087177 1348 0.733 0.733 - - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
66. E330009J07Rik ENSMUSG00000037172 461 0.731 0.731 - - - - - RIKEN cDNA E330009J07 gene [Source:MGI Symbol;Acc:MGI:2444256]
67. Gm15797 Gm15797 87 0.731 - - - - 0.731 -
68. Hist1h2an ENSMUSG00000069309 18 0.731 - - - - 0.731 - histone cluster 1, H2an [Source:MGI Symbol;Acc:MGI:2448300]
69. Rmdn1 ENSMUSG00000028229 218 0.731 - - - - 0.731 - regulator of microtubule dynamics 1 [Source:MGI Symbol;Acc:MGI:1913552]
70. Siae ENSMUSG00000001942 223 0.731 - - - - 0.731 - sialic acid acetylesterase [Source:MGI Symbol;Acc:MGI:104803]
71. Ebag9 ENSMUSG00000022339 1050 0.731 0.731 - - - - - estrogen receptor-binding fragment-associated gene 9 [Source:MGI Symbol;Acc:MGI:1859920]
72. 4632404H12Rik ENSMUSG00000042579 118 0.73 0.730 - - - - - RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
73. Zfp551 ENSMUSG00000034071 101 0.73 - - - - 0.730 - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
74. B430203G13Rik ENSMUSG00000067356 57 0.729 - - - - 0.729 - RIKEN cDNA B430203G13 gene [Source:MGI Symbol;Acc:MGI:3642832]
75. Hs2st1 ENSMUSG00000040151 1928 0.728 - - - - - 0.728 heparan sulfate 2-O-sulfotransferase 1 [Source:MGI Symbol;Acc:MGI:1346049]
76. Shank2 ENSMUSG00000037541 127 0.728 - - - - 0.728 - SH3 and multiple ankyrin repeat domains 2 [Source:MGI Symbol;Acc:MGI:2671987]
77. Vamp2 ENSMUSG00000020894 1819 0.728 0.728 - - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
78. St8sia6 ENSMUSG00000003418 61 0.726 - - - - 0.726 - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:MGI Symbol;Acc:MGI:2386797]
79. 2210016L21Rik ENSMUSG00000029559 1199 0.725 0.725 - - - - - RIKEN cDNA 2210016L21 gene [Source:MGI Symbol;Acc:MGI:1919607]
80. Lins Lins 913 0.723 0.723 - - - - -
81. Gimap4 ENSMUSG00000054435 237 0.723 0.723 - - - - - GTPase, IMAP family member 4 [Source:MGI Symbol;Acc:MGI:1349656]
82. Pogz ENSMUSG00000038902 4598 0.723 0.723 - - - - - pogo transposable element with ZNF domain [Source:MGI Symbol;Acc:MGI:2442117]
83. Rpl36-ps3 ENSMUSG00000066629 25 0.722 - - - - 0.722 - ribosomal protein L36, pseudogene 3 [Source:MGI Symbol;Acc:MGI:3642480]
84. Efna2 ENSMUSG00000003070 1424 0.722 0.722 - - - - - ephrin A2 [Source:MGI Symbol;Acc:MGI:102707]
85. Pomgnt1 ENSMUSG00000028700 954 0.72 0.720 - - - - - protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase [Source:MGI Symbol;Acc:MGI:1915523]
86. Tmem169 ENSMUSG00000026188 68 0.719 - - - - 0.719 - transmembrane protein 169 [Source:MGI Symbol;Acc:MGI:2442781]
87. A330074K22Rik ENSMUSG00000097960 52 0.718 - - - - 0.718 - RIKEN cDNA A330074K22 gene [Source:MGI Symbol;Acc:MGI:3045392]
88. Irf9 ENSMUSG00000002325 582 0.718 0.718 - - - - - interferon regulatory factor 9 [Source:MGI Symbol;Acc:MGI:107587]
89. Dohh ENSMUSG00000078440 774 0.718 0.718 - - - - - deoxyhypusine hydroxylase/monooxygenase [Source:MGI Symbol;Acc:MGI:1915964]
90. Hist1h4j ENSMUSG00000067455 64 0.718 - - - - 0.718 - histone cluster 1, H4j [Source:MGI Symbol;Acc:MGI:2448436]
91. Rft1 ENSMUSG00000052395 512 0.717 - - - - 0.717 - RFT1 homolog [Source:MGI Symbol;Acc:MGI:3607791]
92. Ctdspl2 ENSMUSG00000033411 2738 0.717 0.717 - - - - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:MGI Symbol;Acc:MGI:1196405]
93. Med20 ENSMUSG00000092558 1827 0.716 0.716 - - - - - mediator complex subunit 20 [Source:MGI Symbol;Acc:MGI:1929648]
94. Pcdhb17 ENSMUSG00000046387 93 0.716 - - - - 0.716 - protocadherin beta 17 [Source:MGI Symbol;Acc:MGI:2136754]
95. Tnnt1 ENSMUSG00000064179 836 0.716 0.716 - - - - - troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
96. 0610012H03Rik 0610012H03Rik 53 0.716 - - - - 0.716 -
97. Umps ENSMUSG00000022814 4322 0.715 0.715 - - - - - uridine monophosphate synthetase [Source:MGI Symbol;Acc:MGI:1298388]
98. Gabbr1 ENSMUSG00000024462 2045 0.715 0.715 - - - - - gamma-aminobutyric acid (GABA) B receptor, 1 [Source:MGI Symbol;Acc:MGI:1860139]
99. Itpripl2 ENSMUSG00000095115 287 0.715 0.715 - - - - - inositol 1,4,5-triphosphate receptor interacting protein-like 2 [Source:MGI Symbol;Acc:MGI:2442416]
100. Marf1 ENSMUSG00000060657 365 0.715 0.715 - - - - - meiosis regulator and mRNA stability 1 [Source:MGI Symbol;Acc:MGI:2444505]

There are 54 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA