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Results for Upf1

Gene Name Gene ID Reads Annotation
Upf1 ENSMUSG00000058301 1982 UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]







Genes with expression patterns similar to Upf1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Upf1 ENSMUSG00000058301 1982 6 1.000 1.000 1.000 1.000 1.000 1.000 UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
2. Hoxb5 ENSMUSG00000038700 2439 2.41 - 0.848 - - 0.752 0.810 homeobox B5 [Source:MGI Symbol;Acc:MGI:96186]
3. Cdca3 ENSMUSG00000023505 4570 1.825 0.946 - - - 0.879 - cell division cycle associated 3 [Source:MGI Symbol;Acc:MGI:1315198]
4. Zzef1 ENSMUSG00000055670 953 1.821 0.976 - - - - 0.845 zinc finger, ZZ-type with EF hand domain 1 [Source:MGI Symbol;Acc:MGI:2444286]
5. Gm6483 ENSMUSG00000087153 1875 1.818 0.970 0.848 - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
6. Tmem243 ENSMUSG00000079659 181 1.784 - 0.858 - - 0.926 - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
7. Pigs ENSMUSG00000041958 765 1.774 - 0.873 - - 0.901 - phosphatidylinositol glycan anchor biosynthesis, class S [Source:MGI Symbol;Acc:MGI:2687325]
8. Hn1l 6306 1.774 0.937 - - - 0.837 - hematological and neurological expressed 1-like
9. Immp1l ENSMUSG00000042670 2132 1.768 0.956 0.812 - - - - IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913791]
10. Ipo4 ENSMUSG00000002319 1588 1.757 - - - - 0.932 0.825 importin 4 [Source:MGI Symbol;Acc:MGI:1923001]
11. Mbtps2 ENSMUSG00000046873 1811 1.754 0.956 0.798 - - - - membrane-bound transcription factor peptidase, site 2 [Source:MGI Symbol;Acc:MGI:2444506]
12. Lin7c ENSMUSG00000027162 3559 1.746 0.961 0.785 - - - - lin-7 homolog C (C. elegans) [Source:MGI Symbol;Acc:MGI:1330839]
13. Zswim1 ENSMUSG00000017764 460 1.744 - 0.859 - - 0.885 - zinc finger SWIM-type containing 1 [Source:MGI Symbol;Acc:MGI:1919221]
14. Gm9864 ENSMUSG00000052005 829 1.734 0.798 - - - 0.936 - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
15. Evi5l ENSMUSG00000011832 691 1.729 - 0.861 - - 0.868 - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
16. Foxm1 ENSMUSG00000001517 1628 1.728 - 0.832 - - 0.896 - forkhead box M1 [Source:MGI Symbol;Acc:MGI:1347487]
17. Kdm4b ENSMUSG00000024201 1440 1.724 0.976 - - - - 0.748 lysine (K)-specific demethylase 4B [Source:MGI Symbol;Acc:MGI:2442355]
18. Gm10307 ENSMUSG00000101093 159 1.722 - 0.863 - - - 0.859 predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
19. Gfer ENSMUSG00000040888 1546 1.718 - 0.844 - - 0.874 - growth factor, augmenter of liver regeneration [Source:MGI Symbol;Acc:MGI:107757]
20. Tbc1d20 ENSMUSG00000027465 1026 1.714 - - - - 0.910 0.804 TBC1 domain family, member 20 [Source:MGI Symbol;Acc:MGI:1914481]
21. D930016D06Rik ENSMUSG00000097392 1429 1.711 - 0.901 - - 0.810 - RIKEN cDNA D930016D06 gene [Source:MGI Symbol;Acc:MGI:2442700]
22. Cdc25b ENSMUSG00000027330 1004 1.709 - - - - 0.900 0.809 cell division cycle 25B [Source:MGI Symbol;Acc:MGI:99701]
23. Mns1 ENSMUSG00000032221 1295 1.696 - 0.843 - - 0.853 - meiosis-specific nuclear structural protein 1 [Source:MGI Symbol;Acc:MGI:107933]
24. Isoc1 ENSMUSG00000024601 3341 1.694 0.943 0.751 - - - - isochorismatase domain containing 1 [Source:MGI Symbol;Acc:MGI:1913557]
25. Sugp2 ENSMUSG00000036054 1239 1.684 - 0.859 - - 0.825 - SURP and G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:2678085]
26. Slc25a53 ENSMUSG00000044348 516 1.679 - - - - 0.843 0.836 solute carrier family 25, member 53 [Source:MGI Symbol;Acc:MGI:1914312]
27. Chka ENSMUSG00000024843 2599 1.674 - 0.859 - - 0.815 - choline kinase alpha [Source:MGI Symbol;Acc:MGI:107760]
28. Atp8a1 ENSMUSG00000037685 1155 1.672 - 0.847 - - - 0.825 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
29. Ndc80 ENSMUSG00000024056 2132 1.67 - 0.837 - - 0.833 - NDC80 kinetochore complex component [Source:MGI Symbol;Acc:MGI:1914302]
30. Pde7a ENSMUSG00000069094 2633 1.669 - 0.792 - - 0.877 - phosphodiesterase 7A [Source:MGI Symbol;Acc:MGI:1202402]
31. Nfyb ENSMUSG00000020248 4562 1.661 0.940 - - - - 0.721 nuclear transcription factor-Y beta [Source:MGI Symbol;Acc:MGI:97317]
32. Med7 ENSMUSG00000020397 2247 1.657 0.773 0.884 - - - - mediator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1913463]
33. Pafah1b3 ENSMUSG00000005447 7732 1.656 0.921 - - - 0.735 - platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 [Source:MGI Symbol;Acc:MGI:108414]
34. Stk25 ENSMUSG00000026277 2131 1.654 - - - - 0.861 0.793 serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
35. Edf1 ENSMUSG00000015092 1918 1.649 - 0.792 - - 0.857 - endothelial differentiation-related factor 1 [Source:MGI Symbol;Acc:MGI:1891227]
36. Ppfia1 ENSMUSG00000037519 3319 1.649 - 0.830 - - - 0.819 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 [Source:MGI Symbol;Acc:MGI:1924750]
37. Nin ENSMUSG00000021068 2735 1.649 - 0.761 - - 0.888 - ninein [Source:MGI Symbol;Acc:MGI:105108]
38. Snapc3 ENSMUSG00000028483 2319 1.647 - 0.858 - - 0.789 - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
39. Dpysl4 ENSMUSG00000025478, ENSMUSG00000111393 1028 1.647 - - - - 0.819 0.828 dihydropyrimidinase-like 4 [Source:MGI Symbol;Acc:MGI:1349764]
40. Sema6d ENSMUSG00000027200 1413 1.64 - - - - 0.786 0.854 sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
41. Crcp ENSMUSG00000025532 699 1.639 - 0.861 - - - 0.778 calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
42. Zfp513 ENSMUSG00000043059 2452 1.639 - 0.882 - - - 0.757 zinc finger protein 513 [Source:MGI Symbol;Acc:MGI:2141255]
43. Pak4 ENSMUSG00000030602 1778 1.631 - - - - 0.808 0.823 p21 (RAC1) activated kinase 4 [Source:MGI Symbol;Acc:MGI:1917834]
44. Ipo9 ENSMUSG00000041879 7282 1.628 - 0.816 - - - 0.812 importin 9 [Source:MGI Symbol;Acc:MGI:1918944]
45. Sdad1 ENSMUSG00000029415 2532 1.624 - 0.772 - - 0.852 - SDA1 domain containing 1 [Source:MGI Symbol;Acc:MGI:2140779]
46. Usp31 ENSMUSG00000063317 2365 1.619 - 0.836 - - 0.783 - ubiquitin specific peptidase 31 [Source:MGI Symbol;Acc:MGI:1923429]
47. Aifm1 ENSMUSG00000036932 2751 1.612 - 0.776 - - 0.836 - apoptosis-inducing factor, mitochondrion-associated 1 [Source:MGI Symbol;Acc:MGI:1349419]
48. Mettl13 ENSMUSG00000026694 1671 1.609 - 0.853 - - - 0.756 methyltransferase like 13 [Source:MGI Symbol;Acc:MGI:1918699]
49. Zfp36l2 ENSMUSG00000045817 3284 1.607 - 0.782 - - 0.825 - zinc finger protein 36, C3H type-like 2 [Source:MGI Symbol;Acc:MGI:107945]
50. Gm10275 ENSMUSG00000069682 10249 1.604 - 0.802 - - 0.802 - predicted pseudogene 10275 [Source:MGI Symbol;Acc:MGI:3704354]
51. Wdr76 ENSMUSG00000027242 1591 1.604 - 0.784 - - 0.820 - WD repeat domain 76 [Source:MGI Symbol;Acc:MGI:1926186]
52. Zfp334 ENSMUSG00000017667 3163 1.603 - 0.776 - - - 0.827 zinc finger protein 334 [Source:MGI Symbol;Acc:MGI:2388656]
53. Zfr ENSMUSG00000022201 9919 1.594 0.878 0.716 - - - - zinc finger RNA binding protein [Source:MGI Symbol;Acc:MGI:1341890]
54. Lpar1 ENSMUSG00000038668 2064 1.587 - - - - 0.815 0.772 lysophosphatidic acid receptor 1 [Source:MGI Symbol;Acc:MGI:108429]
55. Car2 ENSMUSG00000027562 1176 1.586 - - - - 0.794 0.792 carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
56. Lig3 ENSMUSG00000020697 1227 1.577 - 0.739 - - 0.838 - ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]
57. Ccnt1 ENSMUSG00000011960 4338 1.574 - - - - 0.789 0.785 cyclin T1 [Source:MGI Symbol;Acc:MGI:1328363]
58. Draxin ENSMUSG00000029005 726 1.567 - - - - 0.821 0.746 dorsal inhibitory axon guidance protein [Source:MGI Symbol;Acc:MGI:1917683]
59. Gng5 ENSMUSG00000068523 1998 1.563 - - - - 0.790 0.773 guanine nucleotide binding protein (G protein), gamma 5 [Source:MGI Symbol;Acc:MGI:109164]
60. Swt1 ENSMUSG00000052748 2836 1.555 - - - - 0.786 0.769 SWT1 RNA endoribonuclease homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914125]
61. Npr3 ENSMUSG00000022206 2321 1.554 - 0.777 - - - 0.777 natriuretic peptide receptor 3 [Source:MGI Symbol;Acc:MGI:97373]
62. Mga ENSMUSG00000033943 2792 1.549 - 0.786 - - - 0.763 MAX gene associated [Source:MGI Symbol;Acc:MGI:1352483]
63. Zbtb43 ENSMUSG00000026788 901 1.547 - - - - 0.717 0.830 zinc finger and BTB domain containing 43 [Source:MGI Symbol;Acc:MGI:1919084]
64. Phb ENSMUSG00000038845 3385 1.543 - - - - 0.746 0.797 prohibitin [Source:MGI Symbol;Acc:MGI:97572]
65. Fam168a ENSMUSG00000029461 5610 1.542 0.735 - - - 0.807 - family with sequence similarity 168, member A [Source:MGI Symbol;Acc:MGI:2442372]
66. Ccnf ENSMUSG00000072082 2671 1.541 - 0.838 - - - 0.703 cyclin F [Source:MGI Symbol;Acc:MGI:102551]
67. Scrib ENSMUSG00000022568 2622 1.535 - 0.757 - - 0.778 - scribbled planar cell polarity [Source:MGI Symbol;Acc:MGI:2145950]
68. Rai14 ENSMUSG00000022246 2935 1.524 - 0.784 - - 0.740 - retinoic acid induced 14 [Source:MGI Symbol;Acc:MGI:1922896]
69. Trp53bp2 ENSMUSG00000026510 1450 1.522 - - - - 0.790 0.732 transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
70. Plxnb1 ENSMUSG00000053646 2044 1.52 - 0.796 - - - 0.724 plexin B1 [Source:MGI Symbol;Acc:MGI:2154238]
71. Parp2 ENSMUSG00000036023 2512 1.518 - 0.788 - - - 0.730 poly (ADP-ribose) polymerase family, member 2 [Source:MGI Symbol;Acc:MGI:1341112]
72. Tnrc6a ENSMUSG00000052707 12706 1.487 0.713 0.774 - - - - trinucleotide repeat containing 6a [Source:MGI Symbol;Acc:MGI:2385292]
73. Sar1a ENSMUSG00000020088 3553 1.47 - - - - 0.714 0.756 secretion associated Ras related GTPase 1A [Source:MGI Symbol;Acc:MGI:98230]
74. Dock1 ENSMUSG00000058325 2924 1.468 - 0.741 - - - 0.727 dedicator of cytokinesis 1 [Source:MGI Symbol;Acc:MGI:2429765]
75. Ror1 ENSMUSG00000035305 2110 1.441 - 0.728 - - 0.713 - receptor tyrosine kinase-like orphan receptor 1 [Source:MGI Symbol;Acc:MGI:1347520]
76. Slc35c2 ENSMUSG00000017664 2381 1.424 - 0.719 - - - 0.705 solute carrier family 35, member C2 [Source:MGI Symbol;Acc:MGI:2385166]
77. Spop ENSMUSG00000057522 1819 1.416 - 0.712 - - - 0.704 speckle-type POZ protein [Source:MGI Symbol;Acc:MGI:1343085]
78. Aasdhppt ENSMUSG00000025894 3055 1.412 0.705 0.707 - - - - aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase [Source:MGI Symbol;Acc:MGI:1914868]
79. Zmpste24 ENSMUSG00000043207 2857 0.985 0.985 - - - - - zinc metallopeptidase, STE24 [Source:MGI Symbol;Acc:MGI:1890508]
80. Lmna ENSMUSG00000028063 622 0.978 0.978 - - - - - lamin A [Source:MGI Symbol;Acc:MGI:96794]
81. Gm12521 Gm12521 210 0.978 0.978 - - - - -
82. Mettl15 ENSMUSG00000057234 379 0.978 0.978 - - - - - methyltransferase like 15 [Source:MGI Symbol;Acc:MGI:1924144]
83. Adam15 ENSMUSG00000028041 630 0.977 0.977 - - - - - a disintegrin and metallopeptidase domain 15 (metargidin) [Source:MGI Symbol;Acc:MGI:1333882]
84. Ccdc23 Ccdc23 2476 0.977 0.977 - - - - -
85. Tmem8 ENSMUSG00000024180 228 0.977 0.977 - - - - - transmembrane protein 8 (five membrane-spanning domains) [Source:MGI Symbol;Acc:MGI:1926283]
86. Ebf4 ENSMUSG00000053552 463 0.977 0.977 - - - - - early B cell factor 4 [Source:MGI Symbol;Acc:MGI:2385972]
87. Lnx2 ENSMUSG00000016520 439 0.977 0.977 - - - - - ligand of numb-protein X 2 [Source:MGI Symbol;Acc:MGI:2155959]
88. Hdac9 ENSMUSG00000004698 287 0.977 0.977 - - - - - histone deacetylase 9 [Source:MGI Symbol;Acc:MGI:1931221]
89. Fsd1 ENSMUSG00000011589 902 0.977 0.977 - - - - - fibronectin type 3 and SPRY domain-containing protein [Source:MGI Symbol;Acc:MGI:1934858]
90. Yod1 ENSMUSG00000046404 793 0.976 0.976 - - - - - YOD1 deubiquitinase [Source:MGI Symbol;Acc:MGI:2442596]
91. Gm16089 ENSMUSG00000081228 1617 0.976 0.976 - - - - - predicted gene 16089 [Source:MGI Symbol;Acc:MGI:3801884]
92. Nit2 ENSMUSG00000022751 895 0.976 0.976 - - - - - nitrilase family, member 2 [Source:MGI Symbol;Acc:MGI:1261838]
93. Zfp574 ENSMUSG00000045252 1410 0.976 0.976 - - - - - zinc finger protein 574 [Source:MGI Symbol;Acc:MGI:2442951]
94. Nlrx1 ENSMUSG00000032109 363 0.976 0.976 - - - - - NLR family member X1 [Source:MGI Symbol;Acc:MGI:2429611]
95. Gm13680 ENSMUSG00000081400 447 0.976 0.976 - - - - - predicted gene 13680 [Source:MGI Symbol;Acc:MGI:3652285]
96. Dqx1 ENSMUSG00000009145 545 0.975 0.975 - - - - - DEAQ RNA-dependent ATPase [Source:MGI Symbol;Acc:MGI:2136388]
97. Ucp2 ENSMUSG00000033685 2664 0.975 0.975 - - - - - uncoupling protein 2 (mitochondrial, proton carrier) [Source:MGI Symbol;Acc:MGI:109354]
98. Ly75 ENSMUSG00000026980 766 0.975 0.975 - - - - - lymphocyte antigen 75 [Source:MGI Symbol;Acc:MGI:106662]
99. Ccdc166 ENSMUSG00000098176 524 0.975 0.975 - - - - - coiled-coil domain containing 166 [Source:MGI Symbol;Acc:MGI:1925902]
100. Cenpl ENSMUSG00000026708 1567 0.975 0.975 - - - - - centromere protein L [Source:MGI Symbol;Acc:MGI:1917704]

There are 1055 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA