Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Upb1

Gene Name Gene ID Reads Annotation
Upb1 ENSMUSG00000033427 20 ureidopropionase, beta [Source:MGI Symbol;Acc:MGI:2143535]







Genes with expression patterns similar to Upb1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Upb1 ENSMUSG00000033427 20 5 1.000 - 1.000 1.000 1.000 1.000 ureidopropionase, beta [Source:MGI Symbol;Acc:MGI:2143535]
2. Slc17a4 ENSMUSG00000021336 10 1.642 - - - 0.838 - 0.804 solute carrier family 17 (sodium phosphate), member 4 [Source:MGI Symbol;Acc:MGI:2442850]
3. Syn3 ENSMUSG00000059602 27 0.904 - - 0.904 - - - synapsin III [Source:MGI Symbol;Acc:MGI:1351334]
4. 8030423F21Rik ENSMUSG00000052295 9 0.863 - - - - - 0.863 RIKEN cDNA 8030423F21 gene [Source:MGI Symbol;Acc:MGI:2443206]
5. E030024N20Rik ENSMUSG00000057990 16 0.854 - - - 0.854 - - RIKEN cDNA E030024N20 gene [Source:MGI Symbol;Acc:MGI:2442009]
6. Gm6291 ENSMUSG00000095614 5 0.853 0.853 - - - - - predicted gene 6291 [Source:MGI Symbol;Acc:MGI:3648803]
7. Gm13550 ENSMUSG00000084250 5 0.838 - - - 0.838 - - predicted gene 13550 [Source:MGI Symbol;Acc:MGI:3651031]
8. Nrg2 ENSMUSG00000060275 16 0.838 - - - 0.838 - - neuregulin 2 [Source:MGI Symbol;Acc:MGI:1098246]
9. Gm12022 ENSMUSG00000085675 13 0.838 - - - 0.838 - - predicted gene 12022 [Source:MGI Symbol;Acc:MGI:3650976]
10. Mical1 ENSMUSG00000019823 14 0.838 - - - 0.838 - - microtubule associated monooxygenase, calponin and LIM domain containing 1 [Source:MGI Symbol;Acc:MGI:2385847]
11. Clrn1 ENSMUSG00000043850 2 0.838 - - - 0.838 - - clarin 1 [Source:MGI Symbol;Acc:MGI:2388124]
12. Ptger1 ENSMUSG00000019464 5 0.838 - - - 0.838 - - prostaglandin E receptor 1 (subtype EP1) [Source:MGI Symbol;Acc:MGI:97793]
13. Gm22661 ENSMUSG00000077380 11 0.838 - - - 0.838 - - predicted gene, 22661 [Source:MGI Symbol;Acc:MGI:5452438]
14. Gm16049 Gm16049 3 0.838 - - - 0.838 - -
15. Gm12703 ENSMUSG00000052767 2 0.838 - - - 0.838 - - predicted gene 12703 [Source:MGI Symbol;Acc:MGI:3650667]
16. Glyat ENSMUSG00000063683 4 0.838 - - - 0.838 - - glycine-N-acyltransferase [Source:MGI Symbol;Acc:MGI:2147502]
17. H2-DMb1 ENSMUSG00000079547 2 0.838 - - - 0.838 - - histocompatibility 2, class II, locus Mb1 [Source:MGI Symbol;Acc:MGI:95922]
18. Mir3098 ENSMUSG00000093157 3 0.838 - - - 0.838 - - microRNA 3098 [Source:MGI Symbol;Acc:MGI:4834313]
19. Acsm2 ENSMUSG00000030945 31 0.838 - - - 0.838 - - acyl-CoA synthetase medium-chain family member 2 [Source:MGI Symbol;Acc:MGI:2385289]
20. Gm26671 ENSMUSG00000097339 2 0.838 - - - 0.838 - - predicted gene, 26671 [Source:MGI Symbol;Acc:MGI:5477165]
21. Ntn5 ENSMUSG00000070564 22 0.838 - - - 0.838 - - netrin 5 [Source:MGI Symbol;Acc:MGI:2685330]
22. Gm14690 Gm14690 2 0.838 - - - 0.838 - -
23. Gm16340 Gm16340 3 0.838 - - - 0.838 - -
24. Gm12279 ENSMUSG00000087120 4 0.838 - - - 0.838 - - predicted gene 12279 [Source:MGI Symbol;Acc:MGI:3649630]
25. Gm22105 ENSMUSG00000080384 5 0.838 - - - 0.838 - - predicted gene, 22105 [Source:MGI Symbol;Acc:MGI:5451882]
26. Gm15070 Gm15070 1 0.838 - - - 0.838 - -
27. Gm15625 ENSMUSG00000082744 1 0.838 - - - 0.838 - - predicted gene 15625 [Source:MGI Symbol;Acc:MGI:3783069]
28. Gm5939 ENSMUSG00000083258 7 0.838 - - - 0.838 - - predicted pseudogene 5939 [Source:MGI Symbol;Acc:MGI:3648845]
29. Gm15971 ENSMUSG00000081692 1 0.838 - - - 0.838 - - predicted gene 15971 [Source:MGI Symbol;Acc:MGI:3802013]
30. Ifi203 ENSMUSG00000039997 17 0.838 - - - 0.838 - - interferon activated gene 203 [Source:MGI Symbol;Acc:MGI:96428]
31. 1700001G01Rik ENSMUSG00000087170 3 0.838 - - - 0.838 - - RIKEN cDNA 1700001G01 gene [Source:MGI Symbol;Acc:MGI:1922683]
32. Snhg3 ENSMUSG00000085241 17 0.838 - - - 0.838 - - small nucleolar RNA host gene 3 [Source:MGI Symbol;Acc:MGI:2684817]
33. Gm5766 ENSMUSG00000089645 11 0.838 - - - 0.838 - - predicted gene 5766 [Source:MGI Symbol;Acc:MGI:3643508]
34. Clec5a ENSMUSG00000029915 6 0.838 - - - 0.838 - - C-type lectin domain family 5, member a [Source:MGI Symbol;Acc:MGI:1345151]
35. Tpbpb ENSMUSG00000062705 1 0.838 - - - 0.838 - - trophoblast specific protein beta [Source:MGI Symbol;Acc:MGI:2151721]
36. Clec4e ENSMUSG00000030142 3 0.838 - - - 0.838 - - C-type lectin domain family 4, member e [Source:MGI Symbol;Acc:MGI:1861232]
37. Gm12816 ENSMUSG00000083011 3 0.838 - - - 0.838 - - predicted gene 12816 [Source:MGI Symbol;Acc:MGI:3649628]
38. BC051070 BC051070 6 0.838 - - - 0.838 - -
39. Gm14465 ENSMUSG00000083691 1 0.838 - - - 0.838 - - predicted gene 14465 [Source:MGI Symbol;Acc:MGI:3651393]
40. Vmn1r-ps144 ENSMUSG00000067949 1 0.838 - - - 0.838 - - vomeronasal 1 receptor, pseudogene 144 [Source:MGI Symbol;Acc:MGI:3649147]
41. Cdx4 ENSMUSG00000031326 2 0.838 - - - 0.838 - - caudal type homeobox 4 [Source:MGI Symbol;Acc:MGI:88362]
42. Tmem181b-ps ENSMUSG00000096780 8 0.838 - - - 0.838 - - transmembrane protein 181B, pseudogene [Source:MGI Symbol;Acc:MGI:3779544]
43. Tlr8 ENSMUSG00000040522 1 0.838 - - - 0.838 - - toll-like receptor 8 [Source:MGI Symbol;Acc:MGI:2176887]
44. Pdzd3 ENSMUSG00000032105 1 0.838 - - - 0.838 - - PDZ domain containing 3 [Source:MGI Symbol;Acc:MGI:2429554]
45. 4732414G09Rik ENSMUSG00000086943 8 0.838 - - - 0.838 - - RIKEN cDNA 4732414G09 gene [Source:MGI Symbol;Acc:MGI:3045381]
46. Cacna1i ENSMUSG00000022416 8 0.838 - - - 0.838 - - calcium channel, voltage-dependent, alpha 1I subunit [Source:MGI Symbol;Acc:MGI:2178051]
47. Sptssb ENSMUSG00000043461 113 0.829 - - 0.829 - - - serine palmitoyltransferase, small subunit B [Source:MGI Symbol;Acc:MGI:1913433]
48. Macc1 ENSMUSG00000041886 16 0.818 - - 0.818 - - - metastasis associated in colon cancer 1 [Source:MGI Symbol;Acc:MGI:2685113]
49. Sycp1 ENSMUSG00000027855 14 0.816 - - 0.816 - - - synaptonemal complex protein 1 [Source:MGI Symbol;Acc:MGI:105931]
50. Slc7a4 ENSMUSG00000022756 12 0.814 - - 0.814 - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 4 [Source:MGI Symbol;Acc:MGI:2146512]
51. Gm15551 ENSMUSG00000086679 8 0.812 - - 0.812 - - - predicted gene 15551 [Source:MGI Symbol;Acc:MGI:3783000]
52. Gm16576 ENSMUSG00000087543 10 0.811 - - 0.811 - - - predicted gene 16576 [Source:MGI Symbol;Acc:MGI:4414996]
53. Gm16238 ENSMUSG00000089988 17 0.811 - - 0.811 - - - predicted gene 16238 [Source:MGI Symbol;Acc:MGI:3802104]
54. Kcnv2 ENSMUSG00000047298 8 0.81 - - 0.810 - - - potassium channel, subfamily V, member 2 [Source:MGI Symbol;Acc:MGI:2670981]
55. Gm12891 ENSMUSG00000080929 3 0.81 - - 0.810 - - - predicted gene 12891 [Source:MGI Symbol;Acc:MGI:3649646]
56. 4930562D21Rik ENSMUSG00000086608 5 0.81 - - 0.810 - - - RIKEN cDNA 4930562D21 gene [Source:MGI Symbol;Acc:MGI:1922574]
57. Gm26520 ENSMUSG00000097429 24 0.81 - - 0.810 - - - predicted gene, 26520 [Source:MGI Symbol;Acc:MGI:5477014]
58. Muc4 ENSMUSG00000079620 16 0.81 - - 0.810 - - - mucin 4 [Source:MGI Symbol;Acc:MGI:2153525]
59. S100g ENSMUSG00000040808 7 0.81 - - 0.810 - - - S100 calcium binding protein G [Source:MGI Symbol;Acc:MGI:104528]
60. Btn2a2 ENSMUSG00000053216 12 0.81 - - 0.810 - - - butyrophilin, subfamily 2, member A2 [Source:MGI Symbol;Acc:MGI:3606486]
61. Dnah5 ENSMUSG00000022262 9 0.81 - - 0.810 - - - dynein, axonemal, heavy chain 5 [Source:MGI Symbol;Acc:MGI:107718]
62. 4921513D11Rik 4921513D11Rik 4 0.81 - - 0.810 - - -
63. Skint7 ENSMUSG00000049214 6 0.81 - - 0.810 - - - selection and upkeep of intraepithelial T cells 7 [Source:MGI Symbol;Acc:MGI:3041190]
64. Fam228b ENSMUSG00000050545 25 0.807 - - 0.807 - - - family with sequence similarity 228, member B [Source:MGI Symbol;Acc:MGI:2442121]
65. Gm8837 ENSMUSG00000090099 32 0.805 - - 0.805 - - - predicted gene 8837 [Source:MGI Symbol;Acc:MGI:3643713]
66. Adrb1 ENSMUSG00000035283 12 0.805 - - 0.805 - - - adrenergic receptor, beta 1 [Source:MGI Symbol;Acc:MGI:87937]
67. Gm11527 ENSMUSG00000085578 1 0.805 - - - - 0.805 - predicted gene 11527 [Source:MGI Symbol;Acc:MGI:3649799]
68. E130018N17Rik ENSMUSG00000087648 10 0.802 - - 0.802 - - - RIKEN cDNA E130018N17 gene [Source:MGI Symbol;Acc:MGI:1924267]
69. Gm2244 ENSMUSG00000092036 15 0.802 - - 0.802 - - - predicted gene 2244 [Source:MGI Symbol;Acc:MGI:3780414]
70. 4930470G03Rik ENSMUSG00000085788 23 0.801 - - 0.801 - - - RIKEN cDNA 4930470G03 gene [Source:MGI Symbol;Acc:MGI:1922171]
71. Srcrb4d Srcrb4d 20 0.801 - - 0.801 - - -
72. Gm8121 ENSMUSG00000051116 163 0.801 - - 0.801 - - - predicted pseudogene 8121 [Source:MGI Symbol;Acc:MGI:3645325]
73. Rhoh ENSMUSG00000029204 19 0.8 - - - 0.800 - - ras homolog family member H [Source:MGI Symbol;Acc:MGI:1921984]
74. 5730422E09Rik ENSMUSG00000097191 32 0.8 - - 0.800 - - - RIKEN cDNA 5730422E09 gene [Source:MGI Symbol;Acc:MGI:1917793]
75. 2900093L17Rik 2900093L17Rik 19 0.799 - - - - - 0.799
76. Ovol2 ENSMUSG00000037279 30 0.798 - - 0.798 - - - ovo like zinc finger 2 [Source:MGI Symbol;Acc:MGI:1338039]
77. Lzts3 ENSMUSG00000037703 12 0.797 - - 0.797 - - - leucine zipper, putative tumor suppressor family member 3 [Source:MGI Symbol;Acc:MGI:2656976]
78. Zfp433 ENSMUSG00000096795 63 0.795 - - 0.795 - - - zinc finger protein 433 [Source:MGI Symbol;Acc:MGI:1920860]
79. Gm15727 ENSMUSG00000081274 6 0.794 - - 0.794 - - - predicted gene 15727 [Source:MGI Symbol;Acc:MGI:3783170]
80. Pou4f2 ENSMUSG00000031688 28 0.793 - - 0.793 - - - POU domain, class 4, transcription factor 2 [Source:MGI Symbol;Acc:MGI:102524]
81. Trim72 ENSMUSG00000042828 25 0.792 - - 0.792 - - - tripartite motif-containing 72 [Source:MGI Symbol;Acc:MGI:3612190]
82. Gpr50 ENSMUSG00000056380 58 0.792 - - 0.792 - - - G-protein-coupled receptor 50 [Source:MGI Symbol;Acc:MGI:1333877]
83. Rgs17 ENSMUSG00000019775 109 0.792 - - 0.792 - - - regulator of G-protein signaling 17 [Source:MGI Symbol;Acc:MGI:1927469]
84. Lrrn4cl ENSMUSG00000071656 22 0.791 - - 0.791 - - - LRRN4 C-terminal like [Source:MGI Symbol;Acc:MGI:1916102]
85. Fmn1 ENSMUSG00000044042 52 0.79 - - 0.790 - - - formin 1 [Source:MGI Symbol;Acc:MGI:101815]
86. Mterf Mterf 53 0.79 - - 0.790 - - -
87. Gm14419 ENSMUSG00000078875 76 0.789 - - 0.789 - - - predicted gene 14419 [Source:MGI Symbol;Acc:MGI:3702410]
88. Lrrc18 ENSMUSG00000041673 29 0.786 - - 0.786 - - - leucine rich repeat containing 18 [Source:MGI Symbol;Acc:MGI:1914830]
89. Pla2g1b ENSMUSG00000029522 6 0.784 - - 0.784 - - - phospholipase A2, group IB, pancreas [Source:MGI Symbol;Acc:MGI:101842]
90. 1810013D15Rik ENSMUSG00000028177 15 0.784 - - 0.784 - - - RIKEN cDNA 1810013D15 gene [Source:MGI Symbol;Acc:MGI:1916292]
91. Gm17108 ENSMUSG00000091133 29 0.782 - - 0.782 - - - predicted gene 17108 [Source:MGI Symbol;Acc:MGI:4937935]
92. Slc2a9 ENSMUSG00000005107 18 0.782 0.782 - - - - - solute carrier family 2 (facilitated glucose transporter), member 9 [Source:MGI Symbol;Acc:MGI:2152844]
93. Ifi47 ENSMUSG00000078920, ENSMUSG00000116330, ENSMUSG00000116420 45 0.781 - - 0.781 - - - interferon gamma inducible protein 47 [Source:NCBI gene;Acc:15953]
94. Zfp641 ENSMUSG00000022987 31 0.778 - - 0.778 - - - zinc finger protein 641 [Source:MGI Symbol;Acc:MGI:2442788]
95. Gm14340 ENSMUSG00000074507 41 0.777 - - 0.777 - - - predicted gene 14340 [Source:MGI Symbol;Acc:MGI:3650817]
96. Nat1 ENSMUSG00000025588 11 0.777 - - - 0.777 - - N-acetyl transferase 1 [Source:MGI Symbol;Acc:MGI:97279]
97. 6330403A02Rik 6330403A02Rik 84 0.776 - - 0.776 - - -
98. A530095I07Rik ENSMUSG00000051805 18 0.772 - - 0.772 - - - RIKEN cDNA A530095I07 gene [Source:MGI Symbol;Acc:MGI:2685376]
99. Zfp11 ENSMUSG00000051034 218 0.769 - - 0.769 - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
100. Gm17786 ENSMUSG00000097987 58 0.767 - - 0.767 - - - predicted gene, 17786 [Source:MGI Symbol;Acc:MGI:5009950]

There are 113 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA