Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Ubp1

Gene Name Gene ID Reads Annotation
Ubp1 ENSMUSG00000009741 708 upstream binding protein 1 [Source:MGI Symbol;Acc:MGI:104889]







Genes with expression patterns similar to Ubp1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ubp1 ENSMUSG00000009741 708 6 1.000 1.000 1.000 1.000 1.000 1.000 upstream binding protein 1 [Source:MGI Symbol;Acc:MGI:104889]
2. Corin ENSMUSG00000005220 269 0.956 - 0.956 - - - - corin [Source:MGI Symbol;Acc:MGI:1349451]
3. Tmem55b 935 0.947 - 0.947 - - - - transmembrane protein 55b, transcript variant X3
4. Ercc4 ENSMUSG00000022545 1268 0.946 - 0.946 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 4 [Source:MGI Symbol;Acc:MGI:1354163]
5. Gm7327 ENSMUSG00000050900 249 0.942 - 0.942 - - - - predicted gene 7327 [Source:MGI Symbol;Acc:MGI:3646274]
6. Flt3 ENSMUSG00000042817 515 0.942 - 0.942 - - - - FMS-like tyrosine kinase 3 [Source:MGI Symbol;Acc:MGI:95559]
7. Dhrs1 ENSMUSG00000002332 3014 0.942 - 0.942 - - - - dehydrogenase/reductase (SDR family) member 1 [Source:MGI Symbol;Acc:MGI:1196314]
8. Chd9 ENSMUSG00000056608 1536 0.94 - 0.940 - - - - chromodomain helicase DNA binding protein 9 [Source:MGI Symbol;Acc:MGI:1924001]
9. Dera ENSMUSG00000030225 1240 0.937 - 0.937 - - - - deoxyribose-phosphate aldolase (putative) [Source:MGI Symbol;Acc:MGI:1913762]
10. Pdpr ENSMUSG00000033624 123 0.936 - 0.936 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
11. Pex2 ENSMUSG00000040374 1030 0.936 - 0.936 - - - - peroxisomal biogenesis factor 2 [Source:MGI Symbol;Acc:MGI:107486]
12. Pabpc4l ENSMUSG00000090919 1259 0.935 - 0.935 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
13. Rpl27-ps2 ENSMUSG00000082171 89 0.935 - 0.935 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
14. Zbtb12 ENSMUSG00000049823 373 0.935 - 0.935 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
15. Cyp27a1 ENSMUSG00000026170 153 0.934 - 0.934 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
16. Larp7 ENSMUSG00000027968 2270 0.934 - 0.934 - - - - La ribonucleoprotein domain family, member 7 [Source:MGI Symbol;Acc:MGI:107634]
17. Smpd3 ENSMUSG00000031906 194 0.934 - 0.934 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
18. Extl1 ENSMUSG00000028838 63 0.934 - 0.934 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
19. Smim4 ENSMUSG00000058351 454 0.934 - 0.934 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
20. Ptges3l ENSMUSG00000097487 146 0.933 - 0.933 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
21. Ppp4r4 ENSMUSG00000021209 242 0.933 - 0.933 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
22. Kcnk5 ENSMUSG00000023243 191 0.932 - 0.932 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
23. Atg3 ENSMUSG00000022663 1323 0.932 - 0.932 - - - - autophagy related 3 [Source:MGI Symbol;Acc:MGI:1915091]
24. Usp35 ENSMUSG00000035713 112 0.932 - 0.932 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
25. Stk40 ENSMUSG00000042608 1035 0.932 - 0.932 - - - - serine/threonine kinase 40 [Source:MGI Symbol;Acc:MGI:1921428]
26. Ap2a1 ENSMUSG00000060279 108 0.932 - 0.932 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
27. Slc38a3 ENSMUSG00000010064 147 0.931 - 0.931 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
28. Zfp71-rs1 Zfp71-rs1 629 0.931 - 0.931 - - - -
29. Gmppa ENSMUSG00000033021 462 0.93 - 0.930 - - - - GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
30. Cd302 ENSMUSG00000060703 214 0.93 - 0.930 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
31. Sass6 ENSMUSG00000027959 1229 0.93 - 0.930 - - - - SAS-6 centriolar assembly protein [Source:MGI Symbol;Acc:MGI:1920026]
32. Gm25734 Gm25734 104 0.929 - 0.929 - - - -
33. Rbm12b1 ENSMUSG00000046667 331 0.929 - 0.929 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
34. Cetn4 ENSMUSG00000045031 377 0.929 - 0.929 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
35. Klhl6 ENSMUSG00000043008 952 0.929 - 0.929 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
36. Rab11fip5 ENSMUSG00000051343 496 0.929 - 0.929 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
37. AK129341 AK129341 204 0.928 - 0.928 - - - -
38. Tmem26 ENSMUSG00000060044 379 0.927 - 0.927 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
39. Plekhm1 ENSMUSG00000034247 251 0.927 - 0.927 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
40. Dhx34 ENSMUSG00000006019 240 0.926 - 0.926 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
41. Zfp11 ENSMUSG00000051034 218 0.926 - 0.926 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
42. Frg1 ENSMUSG00000031590 1255 0.926 - 0.926 - - - - FSHD region gene 1 [Source:MGI Symbol;Acc:MGI:893597]
43. 2010111I01Rik ENSMUSG00000021458 591 0.925 - 0.925 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
44. Gmds ENSMUSG00000038372 653 0.925 - 0.925 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
45. Tmcc1 ENSMUSG00000030126 2753 0.925 - 0.925 - - - - transmembrane and coiled coil domains 1 [Source:MGI Symbol;Acc:MGI:2442368]
46. Hist1h3c ENSMUSG00000069310 508 0.924 - 0.924 - - - - histone cluster 1, H3c [Source:MGI Symbol;Acc:MGI:2448320]
47. Pla2g15 ENSMUSG00000031903 321 0.924 - 0.924 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
48. Car8 ENSMUSG00000041261 286 0.923 - 0.923 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
49. Harbi1 ENSMUSG00000027243 348 0.922 - 0.922 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
50. Tnfrsf1a ENSMUSG00000030341 711 0.922 - 0.922 - - - - tumor necrosis factor receptor superfamily, member 1a [Source:MGI Symbol;Acc:MGI:1314884]
51. Apoo ENSMUSG00000079508 815 0.921 - 0.921 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
52. Cars2 ENSMUSG00000056228 492 0.921 - 0.921 - - - - cysteinyl-tRNA synthetase 2 (mitochondrial)(putative) [Source:MGI Symbol;Acc:MGI:1919191]
53. Ift88 ENSMUSG00000040040 557 0.921 - 0.921 - - - - intraflagellar transport 88 [Source:MGI Symbol;Acc:MGI:98715]
54. Suclg2 ENSMUSG00000061838 465 0.921 - 0.921 - - - - succinate-Coenzyme A ligase, GDP-forming, beta subunit [Source:MGI Symbol;Acc:MGI:1306824]
55. Frk ENSMUSG00000019779 639 0.92 - 0.920 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
56. Taf5l ENSMUSG00000038697 1439 0.92 - 0.920 - - - - TATA-box binding protein associated factor 5 like [Source:MGI Symbol;Acc:MGI:1919039]
57. Gm25735 ENSMUSG00000092905 617 0.919 - 0.919 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
58. Trmt112-ps2 ENSMUSG00000070572 2109 0.919 - 0.919 - - - - tRNA methyltransferase 11-2, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3651720]
59. 9930111J21Rik2 ENSMUSG00000069892 1273 0.919 - 0.919 - - - - RIKEN cDNA 9930111J21 gene 2 [Source:MGI Symbol;Acc:MGI:3711310]
60. Inadl 509 0.919 - 0.919 - - - - InaD-like (Drosophila), transcript variant X9
61. AW146154 ENSMUSG00000074166 587 0.918 - 0.918 - - - - expressed sequence AW146154 [Source:MGI Symbol;Acc:MGI:2142212]
62. Gm12942 332 0.918 - 0.918 - - - - predicted gene 12942
63. Hoxc5 ENSMUSG00000022485 1958 0.918 - 0.918 - - - - homeobox C5 [Source:MGI Symbol;Acc:MGI:96196]
64. Mcc ENSMUSG00000071856 4024 0.917 - 0.917 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
65. 2610035D17Rik ENSMUSG00000087259 651 0.917 - 0.917 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
66. Bckdha ENSMUSG00000060376 653 0.917 - 0.917 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
67. Zfp707 ENSMUSG00000034429 447 0.916 - 0.916 - - - - zinc finger protein 707 [Source:MGI Symbol;Acc:MGI:1916270]
68. 2210408I21Rik ENSMUSG00000071252 189 0.916 - 0.916 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
69. Syne4 ENSMUSG00000019737 724 0.916 - 0.916 - - - - spectrin repeat containing, nuclear envelope family member 4 [Source:MGI Symbol;Acc:MGI:2141950]
70. Gm26782 ENSMUSG00000097431 428 0.915 - 0.915 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
71. Ubtd1 ENSMUSG00000025171 336 0.915 - 0.915 - - - - ubiquitin domain containing 1 [Source:MGI Symbol;Acc:MGI:2385092]
72. Ccdc12 ENSMUSG00000019659 1494 0.915 - 0.915 - - - - coiled-coil domain containing 12 [Source:MGI Symbol;Acc:MGI:1919904]
73. 0610009B22Rik ENSMUSG00000007777 752 0.915 - 0.915 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
74. Dact2 ENSMUSG00000048826 163 0.915 - 0.915 - - - - dishevelled-binding antagonist of beta-catenin 2 [Source:MGI Symbol;Acc:MGI:1920347]
75. Tmem135 ENSMUSG00000039428 946 0.914 - 0.914 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
76. Mical2 ENSMUSG00000038244 295 0.913 - 0.913 - - - - microtubule associated monooxygenase, calponin and LIM domain containing 2 [Source:MGI Symbol;Acc:MGI:2444947]
77. Aldh6a1 ENSMUSG00000021238 522 0.913 - 0.913 - - - - aldehyde dehydrogenase family 6, subfamily A1 [Source:MGI Symbol;Acc:MGI:1915077]
78. Fam57a ENSMUSG00000069808 616 0.912 - 0.912 - - - - family with sequence similarity 57, member A [Source:MGI Symbol;Acc:MGI:2151840]
79. Cbfa2t3 ENSMUSG00000006362 817 0.911 - 0.911 - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
80. Zfp865 ENSMUSG00000074405 1223 0.91 - 0.910 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
81. Ing2 ENSMUSG00000063049 913 0.91 - 0.910 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
82. Osbpl11 ENSMUSG00000022807 1117 0.909 - 0.909 - - - - oxysterol binding protein-like 11 [Source:MGI Symbol;Acc:MGI:2146553]
83. Fbxo25 ENSMUSG00000038365 940 0.909 - 0.909 - - - - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
84. Twf2 ENSMUSG00000023277 849 0.909 - 0.909 - - - - twinfilin actin binding protein 2 [Source:MGI Symbol;Acc:MGI:1346078]
85. Gm26981 ENSMUSG00000098041 717 0.908 - 0.908 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
86. Cxxc4 ENSMUSG00000044365 723 0.907 - 0.907 - - - - CXXC finger 4 [Source:MGI Symbol;Acc:MGI:2442112]
87. Gm4944 968 0.907 - 0.907 - - - - predicted gene 4944
88. Tmem246 ENSMUSG00000039611 866 0.907 - 0.907 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
89. Tmem186 ENSMUSG00000043140 711 0.907 - 0.907 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
90. Wdr46 ENSMUSG00000024312 449 0.906 - 0.906 - - - - WD repeat domain 46 [Source:MGI Symbol;Acc:MGI:1931871]
91. Sccpdh ENSMUSG00000038936 1772 0.906 - 0.906 - - - - saccharopine dehydrogenase (putative) [Source:MGI Symbol;Acc:MGI:1924486]
92. Gm5776 ENSMUSG00000099647 589 0.906 - 0.906 - - - - predicted gene 5776 [Source:MGI Symbol;Acc:MGI:3647650]
93. Nradd ENSMUSG00000032491 668 0.906 - 0.906 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
94. Decr2 ENSMUSG00000036775 1047 0.905 - 0.905 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
95. Osbpl2 ENSMUSG00000039050 960 0.904 - 0.904 - - - - oxysterol binding protein-like 2 [Source:MGI Symbol;Acc:MGI:2442832]
96. Rad51ap1 ENSMUSG00000030346 1698 0.904 - 0.904 - - - - RAD51 associated protein 1 [Source:MGI Symbol;Acc:MGI:1098224]
97. Tbl3 ENSMUSG00000040688 1374 0.903 - 0.903 - - - - transducin (beta)-like 3 [Source:MGI Symbol;Acc:MGI:2384863]
98. Rhbdf1 ENSMUSG00000020282 1113 0.903 - 0.903 - - - - rhomboid 5 homolog 1 [Source:MGI Symbol;Acc:MGI:104328]
99. Btbd9 ENSMUSG00000062202 1289 0.903 - 0.903 - - - - BTB (POZ) domain containing 9 [Source:MGI Symbol;Acc:MGI:1916625]
100. 3110052M02Rik 376 0.902 - 0.902 - - - - RIKEN cDNA 3110052M02 gene, transcript variant X10

There are 297 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA