Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ubfd1

Gene Name Gene ID Reads Annotation
Ubfd1 ENSMUSG00000030870 5770 ubiquitin family domain containing 1 [Source:MGI Symbol;Acc:MGI:107301]







Genes with expression patterns similar to Ubfd1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ubfd1 ENSMUSG00000030870 5770 6 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin family domain containing 1 [Source:MGI Symbol;Acc:MGI:107301]
2. Ccne1 ENSMUSG00000002068 2574 1.506 0.708 0.798 - - - - cyclin E1 [Source:MGI Symbol;Acc:MGI:88316]
3. Xpo6 ENSMUSG00000000131 3272 0.914 - 0.914 - - - - exportin 6 [Source:MGI Symbol;Acc:MGI:2429950]
4. Tpx2 ENSMUSG00000027469 5056 0.896 - 0.896 - - - - TPX2, microtubule-associated [Source:MGI Symbol;Acc:MGI:1919369]
5. Ddx10 ENSMUSG00000053289 1472 0.862 - 0.862 - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 10 [Source:MGI Symbol;Acc:MGI:1924841]
6. Hdac3 ENSMUSG00000024454 1491 0.855 - 0.855 - - - - histone deacetylase 3 [Source:MGI Symbol;Acc:MGI:1343091]
7. Bri3bp ENSMUSG00000037905 6269 0.849 - 0.849 - - - - Bri3 binding protein [Source:MGI Symbol;Acc:MGI:1924059]
8. Pbk ENSMUSG00000022033 3096 0.848 - 0.848 - - - - PDZ binding kinase [Source:MGI Symbol;Acc:MGI:1289156]
9. Entpd6 ENSMUSG00000033068 1181 0.844 - - 0.844 - - - ectonucleoside triphosphate diphosphohydrolase 6 [Source:MGI Symbol;Acc:MGI:1202295]
10. Aatf ENSMUSG00000018697 1024 0.842 - 0.842 - - - - apoptosis antagonizing transcription factor [Source:MGI Symbol;Acc:MGI:1929608]
11. Plp2 ENSMUSG00000031146 747 0.839 - 0.839 - - - - proteolipid protein 2 [Source:MGI Symbol;Acc:MGI:1298382]
12. Pygo2 ENSMUSG00000047824 3820 0.836 - 0.836 - - - - pygopus 2 [Source:MGI Symbol;Acc:MGI:1916161]
13. Fbxo3 ENSMUSG00000027180 4422 0.836 - 0.836 - - - - F-box protein 3 [Source:MGI Symbol;Acc:MGI:1929084]
14. Ccdc47 ENSMUSG00000078622 3526 0.829 - 0.829 - - - - coiled-coil domain containing 47 [Source:MGI Symbol;Acc:MGI:1914413]
15. Homer2 ENSMUSG00000025813 1680 0.821 - 0.821 - - - - homer scaffolding protein 2 [Source:MGI Symbol;Acc:MGI:1347354]
16. Wdr89 ENSMUSG00000045690 12291 0.818 - 0.818 - - - - WD repeat domain 89 [Source:MGI Symbol;Acc:MGI:1919588]
17. Mrpl51 ENSMUSG00000030335 4298 0.817 - 0.817 - - - - mitochondrial ribosomal protein L51 [Source:MGI Symbol;Acc:MGI:1913743]
18. Mrpl54 ENSMUSG00000034932 3136 0.816 - 0.816 - - - - mitochondrial ribosomal protein L54 [Source:MGI Symbol;Acc:MGI:1913297]
19. Slc11a2 ENSMUSG00000023030 1484 0.814 - 0.814 - - - - solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2 [Source:MGI Symbol;Acc:MGI:1345279]
20. Apoo ENSMUSG00000079508 815 0.81 - 0.810 - - - - apolipoprotein O [Source:MGI Symbol;Acc:MGI:1915566]
21. Tmem14c ENSMUSG00000021361 2424 0.808 - 0.808 - - - - transmembrane protein 14C [Source:MGI Symbol;Acc:MGI:1913404]
22. Mxra8 ENSMUSG00000029070 1614 0.808 - 0.808 - - - - matrix-remodelling associated 8 [Source:MGI Symbol;Acc:MGI:1922011]
23. Nub1 ENSMUSG00000028954 992 0.803 - 0.803 - - - - negative regulator of ubiquitin-like proteins 1 [Source:MGI Symbol;Acc:MGI:1889001]
24. Ndufaf2 ENSMUSG00000068184 1600 0.802 - 0.802 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:MGI Symbol;Acc:MGI:1922847]
25. 2010111I01Rik ENSMUSG00000021458 591 0.802 - 0.802 - - - - RIKEN cDNA 2010111I01 gene [Source:MGI Symbol;Acc:MGI:1919311]
26. Gmds ENSMUSG00000038372 653 0.8 - 0.800 - - - - GDP-mannose 4, 6-dehydratase [Source:MGI Symbol;Acc:MGI:1891112]
27. Zfp281 ENSMUSG00000041483 3879 0.799 - 0.799 - - - - zinc finger protein 281 [Source:MGI Symbol;Acc:MGI:3029290]
28. Gm25735 ENSMUSG00000092905 617 0.799 - 0.799 - - - - predicted gene, 25735 [Source:MGI Symbol;Acc:MGI:5455512]
29. C330027C09Rik 2892 0.798 - 0.798 - - - - RIKEN cDNA C330027C09 gene, transcript variant X2
30. Klhl6 ENSMUSG00000043008 952 0.798 - 0.798 - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
31. Smim4 ENSMUSG00000058351 454 0.798 - 0.798 - - - - small integral membrane protein 4 [Source:MGI Symbol;Acc:MGI:1913737]
32. Kcnk5 ENSMUSG00000023243 191 0.797 - 0.797 - - - - potassium channel, subfamily K, member 5 [Source:MGI Symbol;Acc:MGI:1336175]
33. Zbtb12 ENSMUSG00000049823 373 0.797 - 0.797 - - - - zinc finger and BTB domain containing 12 [Source:MGI Symbol;Acc:MGI:88133]
34. Rcsd1 ENSMUSG00000040723 428 0.797 - 0.797 - - - - RCSD domain containing 1 [Source:MGI Symbol;Acc:MGI:2676394]
35. Zfp157 ENSMUSG00000036898 1185 0.796 - 0.796 - - - - zinc finger protein 157 [Source:MGI Symbol;Acc:MGI:1919404]
36. Cd302 ENSMUSG00000060703 214 0.796 - 0.796 - - - - CD302 antigen [Source:MGI Symbol;Acc:MGI:1913455]
37. Cyp27a1 ENSMUSG00000026170 153 0.796 - 0.796 - - - - cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
38. Cetn4 ENSMUSG00000045031 377 0.796 - 0.796 - - - - centrin 4 [Source:MGI Symbol;Acc:MGI:2677454]
39. Usp35 ENSMUSG00000035713 112 0.796 - 0.796 - - - - ubiquitin specific peptidase 35 [Source:MGI Symbol;Acc:MGI:2685339]
40. Zfp71-rs1 Zfp71-rs1 629 0.796 - 0.796 - - - -
41. Rab11fip5 ENSMUSG00000051343 496 0.796 - 0.796 - - - - RAB11 family interacting protein 5 (class I) [Source:MGI Symbol;Acc:MGI:1098586]
42. Gm25734 Gm25734 104 0.795 - 0.795 - - - -
43. Slc38a3 ENSMUSG00000010064 147 0.795 - 0.795 - - - - solute carrier family 38, member 3 [Source:MGI Symbol;Acc:MGI:1923507]
44. 0610009B22Rik ENSMUSG00000007777 752 0.795 - 0.795 - - - - RIKEN cDNA 0610009B22 gene [Source:MGI Symbol;Acc:MGI:1913300]
45. AK129341 AK129341 204 0.795 - 0.795 - - - -
46. Rbm12b1 ENSMUSG00000046667 331 0.794 - 0.794 - - - - RNA binding motif protein 12 B1 [Source:MGI Symbol;Acc:MGI:1919647]
47. Pdpr ENSMUSG00000033624 123 0.794 - 0.794 - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:MGI Symbol;Acc:MGI:2442188]
48. Rpl27-ps2 ENSMUSG00000082171 89 0.794 - 0.794 - - - - ribosomal protein L27, pseudogene 2 [Source:MGI Symbol;Acc:MGI:3649792]
49. Ap2a1 ENSMUSG00000060279 108 0.794 - 0.794 - - - - adaptor-related protein complex 2, alpha 1 subunit [Source:MGI Symbol;Acc:MGI:101921]
50. Pom121 ENSMUSG00000053293 574 0.794 - 0.794 - - - - nuclear pore membrane protein 121 [Source:MGI Symbol;Acc:MGI:2137624]
51. Ptges3l ENSMUSG00000097487 146 0.793 - 0.793 - - - - prostaglandin E synthase 3 like [Source:MGI Symbol;Acc:MGI:1916146]
52. Dgkz ENSMUSG00000040479 4481 0.793 - 0.793 - - - - diacylglycerol kinase zeta [Source:MGI Symbol;Acc:MGI:1278339]
53. Ppp2r5d ENSMUSG00000059409 830 0.793 - - 0.793 - - - protein phosphatase 2, regulatory subunit B', delta [Source:MGI Symbol;Acc:MGI:2388481]
54. Zfp865 ENSMUSG00000074405 1223 0.793 - 0.793 - - - - zinc finger protein 865 [Source:MGI Symbol;Acc:MGI:2442656]
55. Atg10 ENSMUSG00000021619 384 0.793 - 0.793 - - - - autophagy related 10 [Source:MGI Symbol;Acc:MGI:1914045]
56. Extl1 ENSMUSG00000028838 63 0.793 - 0.793 - - - - exostoses (multiple)-like 1 [Source:MGI Symbol;Acc:MGI:1888742]
57. Plekhm1 ENSMUSG00000034247 251 0.793 - 0.793 - - - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]
58. Smpd3 ENSMUSG00000031906 194 0.793 - 0.793 - - - - sphingomyelin phosphodiesterase 3, neutral [Source:MGI Symbol;Acc:MGI:1927578]
59. Cnot6l ENSMUSG00000034724 2623 0.793 - 0.793 - - - - CCR4-NOT transcription complex, subunit 6-like [Source:MGI Symbol;Acc:MGI:2443154]
60. Ppp4r4 ENSMUSG00000021209 242 0.793 - 0.793 - - - - protein phosphatase 4, regulatory subunit 4 [Source:MGI Symbol;Acc:MGI:1921771]
61. S100a16 ENSMUSG00000074457 1007 0.792 - 0.792 - - - - S100 calcium binding protein A16 [Source:MGI Symbol;Acc:MGI:1915110]
62. Zfp160 ENSMUSG00000067942 1222 0.792 - 0.792 - - - - zinc finger protein 160 [Source:MGI Symbol;Acc:MGI:108187]
63. Ing2 ENSMUSG00000063049 913 0.792 - 0.792 - - - - inhibitor of growth family, member 2 [Source:MGI Symbol;Acc:MGI:1916510]
64. Impact ENSMUSG00000024423 2315 0.792 - 0.792 - - - - impact, RWD domain protein [Source:MGI Symbol;Acc:MGI:1098233]
65. Gas5 ENSMUSG00000053332 2096 0.792 - 0.792 - - - - growth arrest specific 5 [Source:MGI Symbol;Acc:MGI:95659]
66. Bckdha ENSMUSG00000060376 653 0.792 - 0.792 - - - - branched chain ketoacid dehydrogenase E1, alpha polypeptide [Source:MGI Symbol;Acc:MGI:107701]
67. Gm26782 ENSMUSG00000097431 428 0.791 - 0.791 - - - - predicted gene, 26782 [Source:MGI Symbol;Acc:MGI:5477276]
68. Mcc ENSMUSG00000071856 4024 0.791 - 0.791 - - - - mutated in colorectal cancers [Source:MGI Symbol;Acc:MGI:96930]
69. Zfp11 ENSMUSG00000051034 218 0.791 - 0.791 - - - - zinc finger protein 11 [Source:MGI Symbol;Acc:MGI:99156]
70. Dhx34 ENSMUSG00000006019 240 0.791 - 0.791 - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 34 [Source:MGI Symbol;Acc:MGI:1918973]
71. Lrp6 ENSMUSG00000030201 3842 0.791 - - 0.791 - - - low density lipoprotein receptor-related protein 6 [Source:MGI Symbol;Acc:MGI:1298218]
72. Prkag1 ENSMUSG00000067713 1318 0.791 - 0.791 - - - - protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:MGI Symbol;Acc:MGI:108411]
73. Nradd ENSMUSG00000032491 668 0.791 - 0.791 - - - - neurotrophin receptor associated death domain [Source:MGI Symbol;Acc:MGI:1914419]
74. Pla2g15 ENSMUSG00000031903 321 0.791 - 0.791 - - - - phospholipase A2, group XV [Source:MGI Symbol;Acc:MGI:2178076]
75. Tmem26 ENSMUSG00000060044 379 0.79 - 0.790 - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
76. Gatad2b ENSMUSG00000042390 1312 0.79 - 0.790 - - - - GATA zinc finger domain containing 2B [Source:MGI Symbol;Acc:MGI:2443225]
77. Gm26981 ENSMUSG00000098041 717 0.79 - 0.790 - - - - predicted gene, 26981 [Source:MGI Symbol;Acc:MGI:5504096]
78. 9430016H08Rik 2854 0.79 - 0.790 - - - - RIKEN cDNA 9430016H08 gene
79. Gm4944 968 0.789 - 0.789 - - - - predicted gene 4944
80. Tmem246 ENSMUSG00000039611 866 0.789 - 0.789 - - - - transmembrane protein 246 [Source:MGI Symbol;Acc:MGI:1914313]
81. Hsdl2 ENSMUSG00000028383 1294 0.789 - 0.789 - - - - hydroxysteroid dehydrogenase like 2 [Source:MGI Symbol;Acc:MGI:1919729]
82. Dcun1d3 ENSMUSG00000048787 898 0.788 - 0.788 - - - - DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2679003]
83. Fdps ENSMUSG00000059743 2077 0.788 - 0.788 - - - - farnesyl diphosphate synthetase [Source:MGI Symbol;Acc:MGI:104888]
84. Zfp949 ENSMUSG00000032425 816 0.788 - 0.788 - - - - zinc finger protein 949 [Source:MGI Symbol;Acc:MGI:1918890]
85. Frk ENSMUSG00000019779 639 0.787 - 0.787 - - - - fyn-related kinase [Source:MGI Symbol;Acc:MGI:103265]
86. 2210408I21Rik ENSMUSG00000071252 189 0.787 - 0.787 - - - - RIKEN cDNA 2210408I21 gene [Source:MGI Symbol;Acc:MGI:1919621]
87. Pabpc4l ENSMUSG00000090919 1259 0.787 - 0.787 - - - - poly(A) binding protein, cytoplasmic 4-like [Source:MGI Symbol;Acc:MGI:3643087]
88. Decr2 ENSMUSG00000036775 1047 0.787 - 0.787 - - - - 2-4-dienoyl-Coenzyme A reductase 2, peroxisomal [Source:MGI Symbol;Acc:MGI:1347059]
89. 3110052M02Rik 376 0.786 - 0.786 - - - - RIKEN cDNA 3110052M02 gene, transcript variant X10
90. Harbi1 ENSMUSG00000027243 348 0.786 - 0.786 - - - - harbinger transposase derived 1 [Source:MGI Symbol;Acc:MGI:2443194]
91. 2610035D17Rik ENSMUSG00000087259 651 0.786 - 0.786 - - - - RIKEN cDNA 2610035D17 gene [Source:MGI Symbol;Acc:MGI:1919636]
92. Usp36 ENSMUSG00000033909 2464 0.786 - 0.786 - - - - ubiquitin specific peptidase 36 [Source:MGI Symbol;Acc:MGI:1919594]
93. Cbfa2t3 ENSMUSG00000006362 817 0.786 - 0.786 - - - - core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human) [Source:MGI Symbol;Acc:MGI:1338013]
94. Pnkp ENSMUSG00000002963 1708 0.785 - 0.785 - - - - polynucleotide kinase 3'- phosphatase [Source:MGI Symbol;Acc:MGI:1891698]
95. Pphln1 ENSMUSG00000036167 7849 0.785 - 0.785 - - - - periphilin 1 [Source:MGI Symbol;Acc:MGI:1917029]
96. Fbxo25 ENSMUSG00000038365 940 0.785 - 0.785 - - - - F-box protein 25 [Source:MGI Symbol;Acc:MGI:1914072]
97. Tmem135 ENSMUSG00000039428 946 0.785 - 0.785 - - - - transmembrane protein 135 [Source:MGI Symbol;Acc:MGI:1920009]
98. Tmem186 ENSMUSG00000043140 711 0.785 - 0.785 - - - - transmembrane protein 186 [Source:MGI Symbol;Acc:MGI:1913940]
99. Car8 ENSMUSG00000041261 286 0.785 - 0.785 - - - - carbonic anhydrase 8 [Source:MGI Symbol;Acc:MGI:88253]
100. Trim8 ENSMUSG00000025034 1494 0.785 - 0.785 - - - - tripartite motif-containing 8 [Source:MGI Symbol;Acc:MGI:1933302]

There are 316 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA