Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USPL1

Gene Name Gene ID Reads Annotation
USPL1 ENSGALG00000017079 6263 ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]











Genes with expression patterns similar to USPL1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USPL1 ENSGALG00000017079 6263 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
2. DHFR ENSGALG00000026757 18478 1.751 - - 0.765 - - - 0.986 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
3. NUDCD2 ENSGALG00000001726 6303 1.745 - - 0.814 - - - - 0.931 - - NudC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30535]
4. IFT20 ENSGALG00000005707 23973 1.728 - - - - - - 0.989 0.739 - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
5. SMARCE1 ENSGALG00000003882 49063 1.703 - - - - - - 0.970 0.733 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
6. MCM3 ENSGALG00000016676 16934 1.702 - - 0.704 - - - 0.998 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
7. GABARAPL2 ENSGALG00000003208 9195 1.658 - - 0.782 - - - - 0.876 - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
8. GSPT1 15580 1.627 - - 0.742 - - - - 0.885 - - G1 to S phase transition 1, transcript variant X1
9. CORO1C ENSGALG00000004901 7055 0.999 - - - - - - 0.999 - - - coronin 1C [Source:NCBI gene;Acc:416893]
10. LRPAP1 ENSGALG00000015612 3526 0.999 - - - - - - 0.999 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
11. WDHD1 ENSGALG00000012199 3570 0.999 - - - - - - 0.999 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
12. C9orf64 ENSGALG00000012589 6097 0.999 - - - - - - 0.999 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
13. Sep-06 Sep-06 5961 0.999 - - - - - - 0.999 - - -
14. FAM192A ENSGALG00000021473 10213 0.999 - - - - - - 0.999 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
15. FAT1 ENSGALG00000013579 6030 0.999 - - - - - - 0.999 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
16. VSX1 ENSGALG00000037576 1517 0.999 - - - - - - 0.999 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
17. EIF1B ENSGALG00000038646 9508 0.999 - - - - - - 0.999 - - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
18. RNF141 ENSGALG00000029586 4962 0.998 - - - - - - 0.998 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
19. ARHGAP32 ENSGALG00000043511 7916 0.998 - - - - - - 0.998 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
20. ZEB1 ENSGALG00000007260 9277 0.998 - - - - - - 0.998 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
21. DAPK3 ENSGALG00000037733 6215 0.997 - - - - - - 0.997 - - - death-associated protein kinase 3, transcript variant X2
22. MATR3 ENSGALG00000002478 12793 0.997 - - - - - - 0.997 - - - matrin 3 [Source:NCBI gene;Acc:373948]
23. CCNYL1 ENSGALG00000008485 11958 0.997 - - - - - - 0.997 - - - cyclin Y like 1
24. HDAC8 ENSGALG00000004825 12066 0.997 - - - - - - 0.997 - - - histone deacetylase 8, transcript variant X2
25. GPC1 ENSGALG00000040316 13364 0.997 - - - - - - 0.997 - - - glypican 1 [Source:NCBI gene;Acc:424770]
26. EFTUD2 ENSGALG00000000988 17913 0.996 - - - - - - 0.996 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
27. RAB12 ENSGALG00000033608 14160 0.996 - - - - - - 0.996 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
28. CXCL12 ENSGALG00000041346 4128 0.996 - - - - - - 0.996 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
29. C15H12ORF49 C15H12ORF49 13250 0.996 - - - - - - 0.996 - - -
30. MCM6 ENSGALG00000012348 12523 0.996 - - - - - - 0.996 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
31. EIF3D ENSGALG00000012529 40887 0.996 - - - - - - 0.996 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
32. CNOT6 ENSGALG00000034316 10496 0.995 - - - - - - 0.995 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
33. CTBPL ENSGALG00000007642 14238 0.994 - - - - - - 0.994 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
34. DNAJC7 ENSGALG00000042796 14597 0.994 - - - - - - 0.994 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
35. SLC9A3R1 ENSGALG00000007650 13053 0.993 - - - - - - 0.993 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
36. HIAT1 HIAT1 447 0.992 - - - - - - - 0.992 - -
37. ENSGALG00000026592 ENSGALG00000026592 4331 0.992 - - - - - - - 0.992 - -
38. TCF15 ENSGALG00000026276 3646 0.992 - - - - - - - 0.992 - - transcription factor 15 [Source:NCBI gene;Acc:395788]
39. ECHDC1 ENSGALG00000014828 958 0.992 - - - - - - - 0.992 - - ethylmalonyl-CoA decarboxylase 1 [Source:NCBI gene;Acc:769021]
40. APCDD1 ENSGALG00000000894 1482 0.992 - - - - - - - 0.992 - - APC down-regulated 1 [Source:NCBI gene;Acc:426765]
41. SNRNP25 ENSGALG00000026559 2097 0.992 - - - - - - - 0.992 - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
42. TMEM18 ENSGALG00000028744 11779 0.992 - - - - - - 0.992 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
43. CSRNP1 ENSGALG00000027905 3141 0.991 - - - - - - - 0.991 - - cysteine and serine rich nuclear protein 1 [Source:HGNC Symbol;Acc:HGNC:14300]
44. SLC25A33 ENSGALG00000002519 4173 0.991 - - - - - - - 0.991 - - solute carrier family 25 member 33 [Source:HGNC Symbol;Acc:HGNC:29681]
45. ORAI2 ENSGALG00000001837 2528 0.991 - - - - - - - 0.991 - - ORAI calcium release-activated calcium modulator 2 [Source:NCBI gene;Acc:417509]
46. CHST10 ENSGALG00000016769 2472 0.991 - - - - - - - 0.991 - - carbohydrate sulfotransferase 10 [Source:NCBI gene;Acc:395206]
47. INTS4 ENSGALG00000000091 5965 0.991 - - - - - - 0.991 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
48. CMIP ENSGALG00000038494 5016 0.99 - - - - - - - 0.990 - - c-Maf inducing protein [Source:HGNC Symbol;Acc:HGNC:24319]
49. MTFR1L ENSGALG00000000998 3457 0.99 - - - - - - - 0.990 - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
50. GSTK1 ENSGALG00000014708 4687 0.99 - - - - - - - 0.990 - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
51. CHMP7 ENSGALG00000000409 8967 0.99 - - - - - - - 0.990 - - charged multivesicular body protein 7 [Source:NCBI gene;Acc:419535]
52. DPP9 ENSGALG00000004200 4515 0.989 - - - - - - - 0.989 - - dipeptidyl peptidase 9 [Source:HGNC Symbol;Acc:HGNC:18648]
53. SEC23A_1 ENSGALG00000010150 14745 0.988 - - - - - - - 0.988 - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
54. RAP1B ENSGALG00000009927 26562 0.987 - - - - - - 0.987 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
55. UBE2L3 ENSGALG00000036739 21401 0.987 - - - - - - 0.987 - - - ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
56. DCN ENSGALG00000011274 4166 0.987 - - - - - - - 0.987 - - decorin [Source:NCBI gene;Acc:417892]
57. DR1 ENSGALG00000005858 8016 0.987 - - - - - - - 0.987 - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
58. CCDC101 CCDC101 9111 0.987 - - - - - - - 0.987 - -
59. WDR70 ENSGALG00000003708 5835 0.986 - - - - - - - 0.986 - - WD repeat domain 70 [Source:NCBI gene;Acc:427444]
60. TRAPPC8 ENSGALG00000015157 4308 0.986 - - - - - - - 0.986 - - trafficking protein particle complex 8, transcript variant X5
61. PDLIM4 ENSGALG00000039872 7823 0.985 - - - - - - 0.985 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
62. PPIG ENSGALG00000009839 24114 0.984 - - - - - - 0.984 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
63. LRPPRC ENSGALG00000009967 17091 0.984 - - - - - - 0.984 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
64. HNRNPH3 ENSGALG00000003947 28724 0.982 - - - - - - 0.982 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
65. ZNF644 ENSGALG00000034253 28348 0.982 - - - - - - 0.982 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
66. CDCA4 ENSGALG00000011692 10381 0.982 - - - - - - 0.982 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
67. NDUFA7 ENSGALG00000000629 14046 0.982 - - - - - - - 0.982 - - NADH:ubiquinone oxidoreductase subunit A7
68. TMEM128 ENSGALG00000014992 6567 0.982 - - - - - - - 0.982 - - transmembrane protein 128 [Source:NCBI gene;Acc:422845]
69. KIF23 ENSGALG00000008095 9919 0.982 - - - - - - - 0.982 - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
70. PDAP1 ENSGALG00000036552 28881 0.979 - - - - - - - 0.979 - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
71. RWDD1 ENSGALG00000014953 9986 0.977 - - - - - - - 0.977 - - RWD domain containing 1 [Source:NCBI gene;Acc:421741]
72. PMM2 ENSGALG00000007326 8260 0.975 - - - - - - - 0.975 - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
73. CASP8AP2 ENSGALG00000015611 5657 0.969 - - - - - - - 0.969 - - caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]
74. NCKAP1 ENSGALG00000002750 22749 0.967 - - - - - - - 0.967 - - NCK associated protein 1 [Source:HGNC Symbol;Acc:HGNC:7666]
75. LZIC ENSGALG00000002616 9052 0.956 - - - - - - - 0.956 - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
76. HNRNPM ENSGALG00000000377 40684 0.95 - - - - - - 0.950 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
77. SCP2 ENSGALG00000010652 19563 0.946 - - - - - - - 0.946 - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
78. DDX19B ENSGALG00000039967 49600 0.943 - - - - - - - 0.943 - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
79. GSTAL2 ENSGALG00000028551 4899 0.928 - - - - - - - 0.928 - - glutathione S-transferase alpha-like 2, transcript variant X4
80. G3BP1 ENSGALG00000004160 36795 0.922 - - - - - - - 0.922 - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
81. DDX6 ENSGALG00000033064 2193 0.922 - - 0.922 - - - - - - - DEAD-box helicase 6 [Source:NCBI gene;Acc:419783]
82. SNRB SNRB 4477 0.912 - - 0.912 - - - - - - -
83. IKBKAP 4508 0.912 - - - - - - - 0.912 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein
84. NACAD 679 0.9 - - 0.900 - - - - - - - NAC alpha domain containing, transcript variant X1
85. ARRDC4 ENSGALG00000007012 1039 0.896 - - 0.896 - - - - - - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
86. GOSR1 ENSGALG00000004326 1556 0.896 - - 0.896 - - - - - - - golgi SNAP receptor complex member 1 [Source:NCBI gene;Acc:417591]
87. PRPF38A ENSGALG00000010627 2476 0.895 - - - - - - - 0.895 - - pre-mRNA processing factor 38A [Source:NCBI gene;Acc:771795]
88. TUBGCP3 ENSGALG00000016836 332 0.894 - - 0.894 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
89. MTHFSD ENSGALG00000033322 824 0.893 - - 0.893 - - - - - - - methenyltetrahydrofolate synthetase domain containing [Source:HGNC Symbol;Acc:HGNC:25778]
90. WHSC1 1712 0.892 - - 0.892 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
91. NCAPD2 ENSGALG00000039448 8658 0.89 - - 0.890 - - - - - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
92. ENSGALG00000004703 ENSGALG00000004703 112 0.89 - - 0.890 - - - - - - -
93. F2R ENSGALG00000014983 106 0.889 - - 0.889 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
94. PSMA6 ENSGALG00000010060 26517 0.889 - - - - - - - 0.889 - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
95. NGF ENSGALG00000002556 122 0.888 - - 0.888 - - - - - - - nerve growth factor [Source:NCBI gene;Acc:396466]
96. SLC3A1 ENSGALG00000009973 608 0.887 - - 0.887 - - - - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
97. TBCD ENSGALG00000001503 7880 0.886 - - - - - - - 0.886 - - tubulin folding cofactor D [Source:NCBI gene;Acc:417334]
98. RPS6KB1 ENSGALG00000005198 169 0.886 - - 0.886 - - - - - - - ribosomal protein S6 kinase B1 [Source:NCBI gene;Acc:417637]
99. RQCD1 RQCD1 110 0.886 - - 0.886 - - - - - - -
100. SEPHS1 ENSGALG00000014575 10701 0.885 - - 0.885 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]

There are 435 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA