Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP8

Gene Name Gene ID Reads Annotation
USP8 ENSGALG00000005894 4499 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]











Genes with expression patterns similar to USP8

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP8 ENSGALG00000005894 4499 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 8 [Source:HGNC Symbol;Acc:HGNC:12631]
2. MTDH ENSGALG00000034050 9525 3.054 0.726 - - - - - 0.734 0.728 - 0.866 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
3. WDSUB1 ENSGALG00000012574 2038 1.706 - - - - - - 0.907 0.799 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
4. SUN1 ENSGALG00000003781 3442 1.662 - - - - - - 0.834 - - 0.828 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
5. ZNF142 ENSGALG00000011393 2078 1.661 - - - - - - 0.851 - - 0.810 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
6. SQLE ENSGALG00000036915 4172 1.637 - - - - - - 0.851 - - 0.786 squalene epoxidase [Source:NCBI gene;Acc:420335]
7. RAB1A ENSGALG00000031582 6929 1.576 0.702 - - - - - 0.874 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
8. CACNA2D2 ENSGALG00000038242 2078 1.576 - - - - - - - 0.795 - 0.781 calcium voltage-gated channel auxiliary subunit alpha2delta 2 [Source:HGNC Symbol;Acc:HGNC:1400]
9. TSPAN12 ENSGALG00000009029 2145 1.459 - - - - - - 0.758 - - 0.701 tetraspanin 12 [Source:NCBI gene;Acc:417763]
10. SBNO1 ENSGALG00000003392 6731 1.434 - - 0.707 - - - - - - 0.727 strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
11. ATRX ENSGALG00000007843 34172 1.434 0.723 - 0.711 - - - - - - - ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
12. SMAD5 ENSGALG00000006309 1748 0.958 - - - - - - 0.958 - - - SMAD family member 5 [Source:NCBI gene;Acc:395679]
13. RPIA ENSGALG00000015960 2784 0.938 - - - - - - 0.938 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
14. SRPK1 ENSGALG00000037546 1849 0.936 - - - - - - 0.936 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]
15. GPN3 ENSGALG00000003807 6320 0.934 - - - - - - 0.934 - - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
16. MORC3 ENSGALG00000036556 2976 0.927 - - - - - - 0.927 - - - MORC family CW-type zinc finger 3 [Source:NCBI gene;Acc:418513]
17. PLCE1 ENSGALG00000039528 151 0.923 - - - - - - 0.923 - - - phospholipase C epsilon 1
18. TLCD2 ENSGALG00000021592 1166 0.92 - - - - - - 0.920 - - - TLC domain containing 2 [Source:HGNC Symbol;Acc:HGNC:33522]
19. TUBA4A ENSGALG00000000433 1367 0.919 - - - - - - 0.919 - - - tubulin alpha 4a
20. SLC25A21 ENSGALG00000010117 536 0.917 - - - - - - 0.917 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
21. NSMCE4A ENSGALG00000009504 1302 0.916 - - - - - - 0.916 - - - NSE4 homolog A, SMC5-SMC6 complex component
22. MBNL2 ENSGALG00000016890 3162 0.916 - - - - - - 0.916 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
23. BPHL ENSGALG00000029659 501 0.916 - - - - - - 0.916 - - - biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094]
24. SUGP1 ENSGALG00000042132 2771 0.912 - - - - - - 0.912 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
25. ZFYVE19 ENSGALG00000008460 2750 0.907 - - - - - - 0.907 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
26. RBM34 ENSGALG00000029915 5618 0.906 - - - - - - 0.906 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
27. PGAP2 ENSGALG00000027762 2583 0.902 - - - - - - 0.902 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
28. TM9SF4 ENSGALG00000006568 567 0.901 - - - - - - 0.901 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
29. NSRP1 ENSGALG00000004186 1683 0.896 - - - - - - 0.896 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
30. PIK3R3 ENSGALG00000010335 374 0.896 - - - - - - 0.896 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
31. TLCD1 ENSGALG00000003973 17569 0.895 - - - - - - 0.895 - - - TLC domain containing 1 [Source:NCBI gene;Acc:417575]
32. TCTE1 ENSGALG00000010165 65 0.895 - - - - - - 0.895 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
33. USP54 ENSGALG00000005232 2749 0.895 - - - - - - 0.895 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
34. EFNB2 ENSGALG00000029175 5664 0.895 - - - - - - 0.895 - - - ephrin B2 [Source:NCBI gene;Acc:395625]
35. PTN ENSGALG00000040493 864 0.893 - - - - - - 0.893 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
36. HEMK1 ENSGALG00000002253 40 0.893 - - - - - - 0.893 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
37. ENSGALG00000026925 ENSGALG00000026925 119 0.893 - - - - - - 0.893 - - -
38. ENSGALG00000016099 ENSGALG00000016099 138 0.893 - - - - - - 0.893 - - -
39. SCUBE1 ENSGALG00000014178 91 0.893 - - - - - - 0.893 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
40. METTL24 ENSGALG00000041120 60 0.893 - - - - - - 0.893 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
41. ENSGALG00000003619 ENSGALG00000003619 58 0.892 - - - - - - 0.892 - - -
42. FAM183A 242 0.892 - - - - - - 0.892 - - - family with sequence similarity 183 member A, transcript variant 2
43. GRB14 ENSGALG00000020703 42 0.892 - - - - - - 0.892 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
44. MXRA5 ENSGALG00000016635 352 0.892 - - - - - - 0.892 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
45. UPK3BL ENSGALG00000001885 1650 0.892 - - - - - - 0.892 - - - uroplakin 3B-like
46. SNORA31 SNORA31 183 0.891 - - - - - - 0.891 - - -
47. ANKRD46 ENSGALG00000041445 3791 0.89 - - - - - - - - - 0.890 ankyrin repeat domain 46, transcript variant X1
48. SCAF4 ENSGALG00000033965 2027 0.89 - - - - - - 0.890 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
49. DNAJC16 ENSGALG00000032832 750 0.89 - - - - - - 0.890 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
50. ENTPD8L ENSGALG00000008936 731 0.889 - - - - - - 0.889 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
51. MCEE ENSGALG00000003913 1527 0.889 - - - - - - 0.889 - - - methylmalonyl-CoA epimerase [Source:NCBI gene;Acc:415385]
52. COPS8 ENSGALG00000033385 10166 0.888 - - - - - - 0.888 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
53. HESX1 ENSGALG00000005506 203 0.886 - - - - - - 0.886 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
54. ENSGALG00000013233 ENSGALG00000013233 3265 0.886 - - - - - - 0.886 - - -
55. GAS6 ENSGALG00000016820 481 0.885 - - - - - - 0.885 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
56. PEX6 ENSGALG00000045514 4582 0.885 - - - - - - 0.885 - - - peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]
57. NCAPG2 ENSGALG00000006525 2319 0.882 - - - - - - 0.882 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
58. TAF8 ENSGALG00000003498 2071 0.881 - - - - - - 0.881 - - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
59. C14orf80 C14orf80 1921 0.881 - - - - - - 0.881 - - -
60. WDR47 ENSGALG00000002129 2624 0.88 - - - - - - 0.880 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
61. ECHDC3 ENSGALG00000006690 1299 0.879 - - - - - - 0.879 - - - enoyl-CoA hydratase domain containing 3 [Source:NCBI gene;Acc:419098]
62. INTS7 ENSGALG00000009843 2395 0.876 - - - - - - 0.876 - - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
63. TPR ENSGALG00000005105 2924 0.875 - - - - - - 0.875 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
64. MESDC1 1013 0.874 - - - - - - 0.874 - - - mesoderm development candidate 1
65. PKN3 532 0.874 - - - - - - 0.874 - - - protein kinase N3, transcript variant X2
66. HELLS ENSGALG00000005451 7094 0.873 - - - - - - 0.873 - - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
67. CEP290 ENSGALG00000011177 1559 0.872 - - - - - - 0.872 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
68. FAM193A ENSGALG00000015667 3075 0.872 - - - - - - 0.872 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
69. LSM10 ENSGALG00000002127 2519 0.872 - - - - - - 0.872 - - - LSM10, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:17562]
70. MPST ENSGALG00000040840 2122 0.871 - - - - - - 0.871 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
71. GPC3 ENSGALG00000006087 3744 0.87 - - - - - - 0.870 - - - glypican 3 [Source:HGNC Symbol;Acc:HGNC:4451]
72. DIEXF ENSGALG00000009887 4782 0.87 - - - - - - 0.870 - - - digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
73. RBL1 ENSGALG00000001332 2568 0.869 - - - - - - 0.869 - - - RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]
74. TM2D3 ENSGALG00000026271 2566 0.868 - - - - - - 0.868 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
75. MBNL1 ENSGALG00000029190 3953 0.865 - - - - - - 0.865 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
76. CCNL1 ENSGALG00000009699 1033 0.865 - - - - - - 0.865 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
77. OCRL ENSGALG00000003920 1812 0.865 - - - - - - 0.865 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
78. PRICKLE1 ENSGALG00000009556 60 0.865 - - - - - - - - - 0.865 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
79. UBE3B ENSGALG00000013851 1672 0.864 - - - - - - 0.864 - - - ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
80. RNASEH1 ENSGALG00000016389 2694 0.862 - - - - - - 0.862 - - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
81. RNF20 ENSGALG00000015548 7199 0.862 - - - - - - 0.862 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
82. LFNG ENSGALG00000038515 5178 0.861 - - - - - - 0.861 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
83. NUP205 ENSGALG00000011662 4157 0.861 - - - - - - 0.861 - - - nucleoporin 205
84. XPO7 ENSGALG00000001838 1875 0.861 - - - - - - 0.861 - - - exportin 7 [Source:NCBI gene;Acc:426925]
85. SPG11 ENSGALG00000008180 1890 0.861 - - - - - - 0.861 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
86. MST1 ENSGALG00000002722 994 0.861 - - - - - - 0.861 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
87. PLEKHA3 ENSGALG00000009135 1700 0.86 - - - - - - 0.860 - - - pleckstrin homology domain containing A3 [Source:NCBI gene;Acc:424128]
88. B4GALT3 ENSGALG00000022891 2825 0.859 - - - - - - 0.859 - - - beta-1,4-galactosyltransferase 3
89. CCBL2 CCBL2 184 0.859 - - - - - - - - - 0.859
90. MGLL ENSGALG00000032736 612 0.858 - - - - - - 0.858 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
91. WIPI1 ENSGALG00000004215 3359 0.857 - - - - - - 0.857 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
92. SPAG9 ENSGALG00000034001 2314 0.856 - - - - - - 0.856 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
93. FAM57A ENSGALG00000004820 1492 0.856 - - - - - - 0.856 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
94. TRIM3 ENSGALG00000034004 110 0.856 - - - - - - - - - 0.856 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
95. NIN ENSGALG00000012361 2284 0.855 - - - - - - 0.855 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
96. ENSGALG00000028164 ENSGALG00000028164 3325 0.854 - - - - - - 0.854 - - -
97. NT5C2 ENSGALG00000008179 1760 0.853 - - - - - - 0.853 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
98. CCNE2 ENSGALG00000040794 1229 0.853 - - - - - - 0.853 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
99. SGSM3 ENSGALG00000012033 1839 0.851 - - - - - - 0.851 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
100. JMJD7 ENSGALG00000026846 1320 0.85 - - - - - - 0.850 - - - jumonji domain containing 7 [Source:NCBI gene;Acc:423221]

There are 404 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA