Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP54

Gene Name Gene ID Reads Annotation
USP54 USP54 186










Genes with expression patterns similar to USP54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP54 USP54 186 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. spon2a ENSDARG00000025465, ENSDARG00000115300 294 2.268 - 0.777 - - - 0.757 0.734 - - spondin 2a, extracellular matrix protein [Source:ZFIN;Acc:ZDB-GENE-990415-160]
3. rasl10a ENSDARG00000062314 207 1.789 - - - 0.939 - 0.850 - - - RAS-like, family 10, member A [Source:ZFIN;Acc:ZDB-GENE-060526-273]
4. si:ch211-106h11.3 ENSDARG00000027360 154 1.736 - - - 0.933 0.803 - - - - si:ch211-106h11.3 [Source:ZFIN;Acc:ZDB-GENE-050208-296]
5. C14orf80 C14orf80 20 1.703 - 0.894 - - 0.809 - - - -
6. C16H8orf76 C16H8orf76 329 1.665 - - - 0.909 - 0.756 - - -
7. ing1 ENSDARG00000019116 394 1.66 - 0.738 - 0.922 - - - - - inhibitor of growth family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-4388]
8. dennd2db ENSDARG00000030250 24 1.658 - - - - 0.893 0.765 - - - DENN/MADD domain containing 2Db [Source:ZFIN;Acc:ZDB-GENE-041114-34]
9. CABZ01074309.1 CABZ01074309.1 121 1.646 - 0.717 - 0.929 - - - - -
10. emc4_1 ENSDARG00000039268 443 1.645 - 0.894 - - - 0.751 - - - ER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
11. TRMT10A ENSDARG00000036678 621 1.627 - - - 0.816 - 0.811 - - - tRNA methyltransferase 10A [Source:ZFIN;Acc:ZDB-GENE-130530-594]
12. zgc:110130 ENSDARG00000039203 352 1.625 - 0.781 - 0.844 - - - - - zgc:110130 [Source:ZFIN;Acc:ZDB-GENE-050522-208]
13. LIMD1_1 LIMD1_1 348 1.606 - - - 0.852 - - 0.754 - -
14. nap1l4a ENSDARG00000070560, ENSDARG00000113907 4244 1.598 - - - 0.894 - - 0.704 - - nucleosome assembly protein 1-like 4a [Source:ZFIN;Acc:ZDB-GENE-030131-9099]
15. sema3c ENSDARG00000034300 881 1.595 - 0.894 - - - - 0.701 - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:ZFIN;Acc:ZDB-GENE-050513-5]
16. telo2 ENSDARG00000000830, ENSDARG00000111572 241 1.586 - 0.832 - - - - 0.754 - - TEL2, telomere maintenance 2, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061103-523]
17. SLC28A2 SLC28A2 21 1.559 - 0.727 - - 0.832 - - - -
18. wdr41 ENSDARG00000009851 420 1.555 - - - 0.721 - 0.834 - - - WD repeat domain 41 [Source:ZFIN;Acc:ZDB-GENE-050706-152]
19. rnf8 ENSDARG00000044949 751 1.54 - - - 0.776 - 0.764 - - - ring finger protein 8, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-849]
20. abcf1 ENSDARG00000031795 8635 1.534 - - - - - 0.759 0.775 - - ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
21. CCDC132 CCDC132 267 1.5 - - - - - 0.739 0.761 - -
22. DFNA5 DFNA5 201 1.459 - - - - 0.728 0.731 - - -
23. fzd3b ENSDARG00000058692 627 1.456 - - - 0.729 - - 0.727 - - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
24. asb14 asb14 249 1.455 - 0.747 - - - - 0.708 - -
25. msrb3 ENSDARG00000045658 988 1.455 - - - 0.712 - - 0.743 - - methionine sulfoxide reductase B3 [Source:ZFIN;Acc:ZDB-GENE-040625-74]
26. ano5a ENSDARG00000015731 601 1.453 0.736 - - 0.717 - - - - - anoctamin 5a [Source:ZFIN;Acc:ZDB-GENE-091013-2]
27. tmx2a ENSDARG00000079122, ENSDARG00000109756 1156 1.446 - - - 0.706 - - 0.740 - - thioredoxin-related transmembrane protein 2a [Source:ZFIN;Acc:ZDB-GENE-050208-95]
28. klhl20 ENSDARG00000038801 936 1.443 - - - 0.722 - - 0.721 - - kelch-like family member 20 [Source:ZFIN;Acc:ZDB-GENE-040426-1935]
29. cacnb1 ENSDARG00000002167 1402 1.428 - 0.711 - - - - 0.717 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
30. si:dkey-10f21.16 si:dkey-10f21.16 252 1.419 - 0.710 - - 0.709 - - - -
31. casq1b ENSDARG00000018105 2643 1.413 - 0.709 - - - - 0.704 - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
32. ABCD2_1 ABCD2_1 13 0.975 - - - 0.975 - - - - -
33. pigv ENSDARG00000101952 173 0.974 - - - 0.974 - - - - - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
34. NMUR1 NMUR1 30 0.973 - - - 0.973 - - - - -
35. got1l1 ENSDARG00000053644 49 0.973 - - - 0.973 - - - - - glutamic-oxaloacetic transaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-556]
36. ctsl.1 ENSDARG00000003902 25 0.971 - - - 0.971 - - - - - cathepsin L.1 [Source:ZFIN;Acc:ZDB-GENE-040718-61]
37. cx28.8 ENSDARG00000071042 62 0.971 - - - 0.971 - - - - - connexin 28.8 [Source:ZFIN;Acc:ZDB-GENE-050616-1]
38. si:dkeyp-69e1.8 ENSDARG00000055731 35 0.971 - - - 0.971 - - - - - si:dkeyp-69e1.8 [Source:ZFIN;Acc:ZDB-GENE-070912-676]
39. CST7 CST7 22 0.97 - - - 0.970 - - - - -
40. CU694372.1 ENSDARG00000097988 105 0.969 - - - 0.969 - - - - -
41. ENSDARG00000032477 ENSDARG00000032477 18 0.969 - - - 0.969 - - - - -
42. ftr64 ENSDARG00000101514 33 0.968 - - - 0.968 - - - - - finTRIM family, member 64 [Source:ZFIN;Acc:ZDB-GENE-090508-8]
43. CABZ01064972.1 ENSDARG00000098966 199 0.965 - - - 0.965 - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
44. rnmtl1b 116 0.964 - - - 0.964 - - - - - RNA methyltransferase like 1b
45. BEND2 BEND2 92 0.964 - - - 0.964 - - - - -
46. lifrb ENSDARG00000039863 102 0.964 - - - 0.964 - - - - - leukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
47. slc16a12a ENSDARG00000017773 47 0.964 - - - 0.964 - - - - - solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
48. cyp2k18 ENSDARG00000104593 27 0.964 - - - 0.964 - - - - - cytochrome P450, family 2, subfamily K, polypeptide 18 [Source:ZFIN;Acc:ZDB-GENE-040426-1584]
49. asah1a ENSDARG00000037091, ENSDARG00000112187 390 0.962 - - - 0.962 - - - - - N-acylsphingosine amidohydrolase (acid ceramidase) 1a [Source:ZFIN;Acc:ZDB-GENE-041010-191]
50. CABZ01025393.1 CABZ01025393.1 37 0.961 - - - 0.961 - - - - -
51. sec22bb ENSDARG00000100435 33 0.96 - - - 0.960 - - - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
52. pus3 ENSDARG00000028976 52 0.96 - - - 0.960 - - - - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
53. batf3 ENSDARG00000042577 34 0.959 - - - 0.959 - - - - - basic leucine zipper transcription factor, ATF-like 3 [Source:ZFIN;Acc:ZDB-GENE-041014-356]
54. ENSDARG00000092910 ENSDARG00000092910 44 0.958 - - - 0.958 - - - - -
55. nr1d4b ENSDARG00000059370 243 0.955 - - - 0.955 - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
56. FAM26E FAM26E 79 0.955 - - - 0.955 - - - - -
57. ENKD1 ENSDARG00000043550 44 0.954 - - - 0.954 - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
58. C21HXorf40A C21HXorf40A 216 0.954 - - - 0.954 - - - - -
59. srd5a3 ENSDARG00000043307 142 0.953 - - - 0.953 - - - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
60. zgc:162936 ENSDARG00000069957 95 0.952 - - - 0.952 - - - - - zgc:162936 [Source:ZFIN;Acc:ZDB-GENE-030131-5253]
61. CR383676.3_1 CR383676.3_1 177 0.952 - - - 0.952 - - - - -
62. ugt2b6 ugt2b6 111 0.952 - - - 0.952 - - - - -
63. si:ch211-278j3.3 ENSDARG00000020284 478 0.951 - - - 0.951 - - - - - si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
64. ascc2 ENSDARG00000013058 228 0.949 - - - 0.949 - - - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
65. PRICKLE2 PRICKLE2 69 0.948 - 0.948 - - - - - - -
66. mettl21a ENSDARG00000012051 86 0.946 - - - 0.946 - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]
67. CR318603.2 ENSDARG00000105536 199 0.946 - - - 0.946 - - - - -
68. toporsb ENSDARG00000105028 1898 0.946 - - - 0.946 - - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
69. zgc:113142 ENSDARG00000038969 74 0.945 - 0.945 - - - - - - - zgc:113142 [Source:ZFIN;Acc:ZDB-GENE-050220-2]
70. MSANTD2 ENSDARG00000079474 121 0.945 - 0.945 - - - - - - - Myb/SANT DNA binding domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26266]
71. btr18 ENSDARG00000103618 39 0.944 - - - 0.944 - - - - - bloodthirsty-related gene family, member 18 [Source:ZFIN;Acc:ZDB-GENE-080213-2]
72. GABRR1 ENSDARG00000043902 71 0.944 - - - 0.944 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
73. ARSJ ENSDARG00000077590 684 0.944 - - - 0.944 - - - - - arylsulfatase family, member J [Source:ZFIN;Acc:ZDB-GENE-111215-1]
74. tm9sf1 ENSDARG00000022970 113 0.944 - - - 0.944 - - - - - transmembrane 9 superfamily member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-64]
75. IP6K1 ENSDARG00000073744 524 0.943 - - - 0.943 - - - - - inositol hexakisphosphate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-110317-2]
76. C9H2orf40 C9H2orf40 212 0.942 - - - 0.942 - - - - -
77. PAOX PAOX 251 0.942 - - - 0.942 - - - - -
78. si:dkeyp-72g6.2 si:dkeyp-72g6.2 121 0.941 - 0.941 - - - - - - -
79. cttnbp2nl cttnbp2nl 166 0.941 - 0.941 - - - - - - -
80. CCSAP CCSAP 147 0.941 - 0.941 - - - - - - -
81. CR388132.2 ENSDARG00000104041 640 0.94 - - - 0.940 - - - - -
82. si:dkey-287g12.6 ENSDARG00000096808 271 0.94 - - - 0.940 - - - - - si:dkey-287g12.6 [Source:ZFIN;Acc:ZDB-GENE-130603-36]
83. adarb1a ENSDARG00000041609 476 0.934 - - - 0.934 - - - - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
84. CC2D1A 1262 0.933 - - - 0.933 - - - - - coiled-coil and C2 domain containing 1A, transcript variant X2
85. CR388046.3 ENSDARG00000105537 108 0.931 - - - 0.931 - - - - -
86. slc35b1_1 ENSDARG00000038213 194 0.931 - - - 0.931 - - - - - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
87. pdik1l ENSDARG00000056509 548 0.929 - - - 0.929 - - - - - PDLIM1 interacting kinase 1 like [Source:ZFIN;Acc:ZDB-GENE-051113-236]
88. CU462878.1 ENSDARG00000090072 352 0.929 - - - 0.929 - - - - - keratinocyte associated protein 3 [Source:NCBI gene;Acc:100538219]
89. samd10a ENSDARG00000079978, ENSDARG00000112138 430 0.929 - - - 0.929 - - - - - sterile alpha motif domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-080204-53]
90. si:ch73-127k6.1 si:ch73-127k6.1 114 0.928 - - - 0.928 - - - - -
91. fgf24 ENSDARG00000037677 242 0.927 - - - 0.927 - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
92. si:rp71-1i20.2 ENSDARG00000043198 113 0.926 - - - 0.926 - - - - - si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
93. CR848045.1 CR848045.1 459 0.926 - 0.926 - - - - - - -
94. shisa7 shisa7 181 0.925 - 0.925 - - - - - - -
95. CR954145.1 CR954145.1 327 0.925 - 0.925 - - - - - - -
96. btr01 ENSDARG00000051965 610 0.924 - - - 0.924 - - - - - bloodthirsty-related gene family, member 1 [Source:ZFIN;Acc:ZDB-GENE-090511-2]
97. rasl12 ENSDARG00000002701 66 0.923 - - - 0.923 - - - - - RAS-like, family 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1201]
98. wdr46 ENSDARG00000095879 374 0.922 - - - 0.922 - - - - - WD repeat domain 46 [Source:ZFIN;Acc:ZDB-GENE-040426-1264]
99. myo18ab ENSDARG00000061862 124 0.921 - - - 0.921 - - - - - myosin XVIIIAb [Source:ZFIN;Acc:ZDB-GENE-080423-1]
100. BX897726.3 BX897726.3 220 0.92 - - - 0.920 - - - - -

There are 1128 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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