Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP53

Gene Name Gene ID Reads Annotation
USP53 ENSGALG00000011990 12 ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]











Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP53 ENSGALG00000011990 12 4 - - - 1.000 - 1.000 - 1.000 - 1.000 ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
2. HAVCR1 ENSGALG00000017362 25 1.824 - - - - - 0.845 - 0.979 - - hepatitis A virus cellular receptor 1 [Source:NCBI gene;Acc:416249]
3. C1QTNF6 ENSGALG00000027067 493 1.767 - - - - - 0.867 - 0.900 - - C1q and TNF related 6 [Source:HGNC Symbol;Acc:HGNC:14343]
4. ZNFX1 ENSGALG00000004859 33 1.678 - - - - - 0.759 - 0.919 - - zinc finger NFX1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:29271]
5. ENSGALG00000019430 ENSGALG00000019430 32 1.62 - - - - - - - 0.893 - 0.727
6. MFI2 MFI2 1172 1.448 - - - - - 0.704 - 0.744 - -
7. STAB1 21 1 - - - - - - - 1.000 - - stabilin 1, transcript variant X2
8. GFAP ENSGALG00000000909 21 1 - - - - - - - 1.000 - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
9. ENSGALG00000019053 ENSGALG00000019053 8 1 - - - - - - - 1.000 - -
10. FOXP4 ENSGALG00000033497 13 1 - - - - - - - 1.000 - - forkhead box P4 [Source:HGNC Symbol;Acc:HGNC:20842]
11. PLB1 PLB1 101 1 - - - - - - - 1.000 - -
12. APOAIV APOAIV 5 1 - - - - - - - 1.000 - -
13. GINS3 ENSGALG00000031209 32 1 - - - - - - - 1.000 - - GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]
14. CCDC96 9 1 - - - - - - - 1.000 - - coiled-coil domain containing 96
15. SDR42E2 ENSGALG00000006964 57 1 - - - - - - - 1.000 - - short chain dehydrogenase/reductase family 42E, member 2 [Source:NCBI gene;Acc:416618]
16. TMCO4 ENSGALG00000004081 31 0.998 - - - - - - - 0.998 - - transmembrane and coiled-coil domains 4 [Source:HGNC Symbol;Acc:HGNC:27393]
17. KRT20 ENSGALG00000019716 11 0.996 - - - - - - - 0.996 - - keratin 20 [Source:NCBI gene;Acc:420045]
18. ICOS ENSGALG00000008656 27 0.996 - - - - - - - 0.996 - - inducible T cell costimulator [Source:NCBI gene;Acc:424105]
19. CD4 ENSGALG00000014477 19 0.995 - - - - - - - 0.995 - - CD4 molecule [Source:NCBI gene;Acc:395362]
20. INA ENSGALG00000028238 208 0.994 - - - - - - - 0.994 - - internexin neuronal intermediate filament protein alpha
21. MAPT ENSGALG00000000625 659 0.993 - - - - - - - 0.993 - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
22. DNAI2 ENSGALG00000004495 45 0.991 - - - - - - - 0.991 - - dynein axonemal intermediate chain 2
23. ANKRD44 ENSGALG00000007996 17 0.991 - - - - - - - 0.991 - - ankyrin repeat domain 44 [Source:NCBI gene;Acc:424055]
24. ABCA8 ENSGALG00000021399 11 0.99 - - - - - - - 0.990 - - ATP binding cassette subfamily A member 8
25. KLRD1 ENSGALG00000014722 27 0.988 - - - - - - - 0.988 - - killer cell lectin like receptor D1 [Source:NCBI gene;Acc:769174]
26. ZIC3 ENSGALG00000031144 863 0.986 - - - - - - - 0.986 - - Zic family member 3 [Source:HGNC Symbol;Acc:HGNC:12874]
27. AQP12 AQP12 11 0.983 - - - - - - - 0.983 - -
28. RIPK4 ENSGALG00000040189 102 0.983 - - - - - - - 0.983 - - receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]
29. KIAA0513 ENSGALG00000025938 46 0.979 - - - - - - - 0.979 - - KIAA0513 [Source:HGNC Symbol;Acc:HGNC:29058]
30. IRG1 IRG1 21 0.976 - - - - - - - 0.976 - -
31. PAK2 ENSGALG00000006426 283 0.973 - - - - - - - 0.973 - - p21 (RAC1) activated kinase 2 [Source:HGNC Symbol;Acc:HGNC:8591]
32. NXPH2 ENSGALG00000029083 353 0.972 - - - - - - - 0.972 - - neurexophilin 2 [Source:HGNC Symbol;Acc:HGNC:8076]
33. ENPP3 ENSGALG00000037587 25 0.967 - - - - - - - 0.967 - - ectonucleotide pyrophosphatase/phosphodiesterase 3 [Source:HGNC Symbol;Acc:HGNC:3358]
34. EPB41L4A ENSGALG00000000234 113 0.967 - - - - - - - 0.967 - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
35. PTPRD ENSGALG00000015058 37 0.965 - - - - - - - 0.965 - - protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
36. LOC417973 ENSGALG00000019325 9 0.965 - - - - - - - 0.965 - - uncharacterized LOC417973, transcript variant X1
37. ENSGALG00000019522 ENSGALG00000019522 122 0.957 - - - - - - - 0.957 - -
38. ENSGALG00000023731 ENSGALG00000023731 149 0.953 - - - - - - - 0.953 - -
39. SMYD1 ENSGALG00000015935 75 0.949 - - - - - - - 0.949 - - SET and MYND domain containing 1 [Source:NCBI gene;Acc:373960]
40. ABCC4 ENSGALG00000016896 154 0.946 - - - - - - - 0.946 - - ATP binding cassette subfamily C member 4 [Source:NCBI gene;Acc:418791]
41. DZANK1 ENSGALG00000008731 120 0.946 - - - - - - - 0.946 - - double zinc ribbon and ankyrin repeat domains 1 [Source:NCBI gene;Acc:416722]
42. ENSGALG00000021882 ENSGALG00000021882 63 0.945 - - - - - - - 0.945 - -
43. RNASET2 ENSGALG00000011426 40 0.941 - - - - - - - 0.941 - - ribonuclease T2 [Source:NCBI gene;Acc:421569]
44. PRSS35 ENSGALG00000015847 52 0.938 - - - - - - - 0.938 - - serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]
45. NRIP3 ENSGALG00000005903 58 0.937 - - - - - - - 0.937 - - nuclear receptor interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:1167]
46. STXBP1 ENSGALG00000040003 157 0.928 - - - - - - - 0.928 - - syntaxin binding protein 1 [Source:NCBI gene;Acc:404293]
47. MATK ENSGALG00000000736 4 0.927 - - - - - 0.927 - - - - megakaryocyte-associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6906]
48. ENSGALG00000019491 ENSGALG00000019491 1 0.927 - - - - - 0.927 - - - -
49. KIAA1024L ENSGALG00000027692 20 0.927 - - - - - 0.927 - - - - KIAA1024 like [Source:HGNC Symbol;Acc:HGNC:33914]
50. ENSGALG00000021716 ENSGALG00000021716 5 0.927 - - - - - 0.927 - - - -
51. PARM1 ENSGALG00000010268 13 0.927 - - - - - 0.927 - - - - prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:HGNC:24536]
52. PROZ ENSGALG00000016832 6 0.927 - - - - - 0.927 - - - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
53. PCBP3 ENSGALG00000004394 5 0.927 - - - - - 0.927 - - - - poly(rC) binding protein 3, transcript variant X32
54. ITK ENSGALG00000003857 1 0.927 - - - - - 0.927 - - - - IL2 inducible T cell kinase [Source:HGNC Symbol;Acc:HGNC:6171]
55. B3GALT1 ENSGALG00000010931 6 0.927 - - - - - 0.927 - - - - beta-1,3-galactosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:916]
56. RGS13 ENSGALG00000026810 8 0.927 - - - - - 0.927 - - - - regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]
57. CASP10 ENSGALG00000046494 2 0.927 - - - - - 0.927 - - - - caspase 10 [Source:HGNC Symbol;Acc:HGNC:1500]
58. ENSGALG00000027565 ENSGALG00000027565 2 0.927 - - - - - 0.927 - - - -
59. PCGF2 ENSGALG00000018815 38 0.927 - - - - - 0.927 - - - - polycomb group ring finger 2 [Source:NCBI gene;Acc:425919]
60. ENSGALG00000022892 ENSGALG00000022892 3 0.927 - - - - - 0.927 - - - -
61. OMG ENSGALG00000005594 3 0.927 - - - - - 0.927 - - - - oligodendrocyte myelin glycoprotein [Source:HGNC Symbol;Acc:HGNC:8135]
62. KIAA2013 ENSGALG00000004533 8 0.927 - - - - - 0.927 - - - - KIAA2013 [Source:HGNC Symbol;Acc:HGNC:28513]
63. MYO5C ENSGALG00000033198 36 0.927 - - - - - 0.927 - - - - myosin VC [Source:HGNC Symbol;Acc:HGNC:7604]
64. TSGA10 ENSGALG00000016757 4 0.927 - - - - - 0.927 - - - - testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]
65. ADCYAP1R1 ENSGALG00000005223 114 0.926 - - - - - - - 0.926 - - ADCYAP receptor type I [Source:NCBI gene;Acc:420386]
66. SENP7 ENSGALG00000044642 48 0.924 - - - - - 0.924 - - - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
67. TRAF-5 TRAF-5 102 0.923 - - - - - - - 0.923 - -
68. CCDC86 ENSGALG00000036935 5280 0.923 - - - - - - - 0.923 - - coiled-coil domain containing 86 [Source:HGNC Symbol;Acc:HGNC:28359]
69. KLF4 ENSGALG00000026928 184 0.922 - - - - - 0.922 - - - - Kruppel like factor 4 [Source:HGNC Symbol;Acc:HGNC:6348]
70. CD200R1A CD200R1A 105 0.92 - - - - - - - 0.920 - -
71. INTS6L ENSGALG00000006157 2303 0.92 - - - - - 0.920 - - - - integrator complex subunit 6 like, transcript variant X6
72. FAM219A ENSGALG00000005821 52 0.919 - - - - - - - 0.919 - - family with sequence similarity 219 member A [Source:HGNC Symbol;Acc:HGNC:19920]
73. MMEL1 ENSGALG00000001115 46 0.914 - - - - - - - 0.914 - - membrane metalloendopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:14668]
74. TP53I3 ENSGALG00000016502 178 0.913 - - - - - - - 0.913 - - tumor protein p53 inducible protein 3 [Source:HGNC Symbol;Acc:HGNC:19373]
75. CNTN1 ENSGALG00000009523 158 0.913 - - - - - - - 0.913 - - contactin 1 [Source:NCBI gene;Acc:417786]
76. GPR61 ENSGALG00000040168 70 0.913 - - - - - - - 0.913 - - G protein-coupled receptor 61 [Source:HGNC Symbol;Acc:HGNC:13300]
77. ARHGEF37 ENSGALG00000039652 28 0.912 - - - - - - - 0.912 - - Rho guanine nucleotide exchange factor 37 [Source:HGNC Symbol;Acc:HGNC:34430]
78. SPINK4 ENSGALG00000043964 50 0.911 - - - - - - - 0.911 - - serine peptidase inhibitor, Kazal type 4 [Source:HGNC Symbol;Acc:HGNC:16646]
79. ARHGAP25 ENSGALG00000035194 74 0.907 - - - - - - - 0.907 - - Rho GTPase activating protein 25 [Source:NCBI gene;Acc:419516]
80. LCA5L ENSGALG00000016125 99 0.904 - - - - - - - 0.904 - - LCA5L, lebercilin like [Source:HGNC Symbol;Acc:HGNC:1255]
81. ENSGALG00000026155 ENSGALG00000026155 49 0.904 - - - - - 0.904 - - - -
82. TMEM45BL ENSGALG00000024296 5 0.903 - - - - - 0.903 - - - - transmembrane protein 45B-like
83. LMOD1 ENSGALG00000028721 81 0.898 - - - - - - - 0.898 - - leiomodin 1 [Source:HGNC Symbol;Acc:HGNC:6647]
84. HDAC11 ENSGALG00000005092 176 0.897 - - - - - - - 0.897 - - histone deacetylase 11 [Source:NCBI gene;Acc:415978]
85. PTPRF ENSGALG00000010053 27 0.897 - - - - - 0.897 - - - - protein tyrosine phosphatase, receptor type F [Source:HGNC Symbol;Acc:HGNC:9670]
86. INPP4A ENSGALG00000029709 48 0.897 - - - - - - - 0.897 - - inositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]
87. ABHD10 ENSGALG00000015378 12 0.894 - - - - - 0.894 - - - - abhydrolase domain containing 10 [Source:HGNC Symbol;Acc:HGNC:25656]
88. ENSGALG00000028962 ENSGALG00000028962 7 0.894 - - - - - 0.894 - - - -
89. SLC7A2 ENSGALG00000013627 58 0.892 - - - - - - - 0.892 - - solute carrier family 7 member 2 [Source:NCBI gene;Acc:422730]
90. SNAP23 ENSGALG00000009097 36 0.89 - - - - - - - 0.890 - - synaptosome associated protein 23 [Source:NCBI gene;Acc:423235]
91. uc_6 uc_6 14 0.888 - - - 0.888 - - - - - -
92. FIP1L1 ENSGALG00000013943 15 0.888 - - - 0.888 - - - - - - factor interacting with PAPOLA and CPSF1, transcript variant X5
93. IL12RB1 28 0.888 - - - - - 0.888 - - - - interleukin 12 receptor subunit beta 1, transcript variant X4
94. TM4SF19 ENSGALG00000006375 9 0.888 - - - 0.888 - - - - - - transmembrane 4 L six family member 19 [Source:NCBI gene;Acc:424855]
95. CDC20B ENSGALG00000046188 10 0.888 - - - 0.888 - - - - - - cell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]
96. RCAN2 ENSGALG00000016709 8 0.888 - - - 0.888 - - - - - - regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]
97. GFRA1 ENSGALG00000009173 371 0.886 - - - - - - - 0.886 - - GDNF family receptor alpha 1 [Source:NCBI gene;Acc:395994]
98. ATP13A2 ENSGALG00000003774 271 0.884 - - - - - 0.884 - - - - ATPase 13A2 [Source:NCBI gene;Acc:419466]
99. ABCB7 ENSGALG00000007788 170 0.884 - - - - - - - 0.884 - - ATP binding cassette subfamily B member 7 [Source:HGNC Symbol;Acc:HGNC:48]
100. RUNDC3B ENSGALG00000008954 924 0.879 - - - - - 0.879 - - - - RUN domain containing 3B [Source:NCBI gene;Acc:420535]

There are 223 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA