Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP53

Gene Name Gene ID Reads Annotation
USP53 ENSG00000145390 1240 ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]



Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. USP53 ENSG00000145390 1240 2 1.000 1.000 ubiquitin specific peptidase 53 [Source:HGNC Symbol;Acc:HGNC:29255]
2. PEG3 ENSG00000198300 11207 1.487 0.712 0.775 paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]
3. GATA6 ENSG00000141448 3614 1.463 0.742 0.721 GATA binding protein 6 [Source:HGNC Symbol;Acc:HGNC:4174]
4. ZBTB44 ENSG00000196323 6946 0.788 - 0.788 zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]
5. C7orf60 C7orf60 1835 0.777 - 0.777
6. TAB2 ENSG00000055208 3548 0.776 - 0.776 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
7. ERBB2IP ERBB2IP 3327 0.771 - 0.771
8. RFX7 ENSG00000181827 5171 0.77 - 0.770 regulatory factor X7 [Source:HGNC Symbol;Acc:HGNC:25777]
9. SPIN1 ENSG00000106723 7283 0.767 - 0.767 spindlin 1 [Source:HGNC Symbol;Acc:HGNC:11243]
10. ZMYM2 ENSG00000121741 4271 0.767 - 0.767 zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]
11. VPS13A ENSG00000197969 1547 0.767 - 0.767 vacuolar protein sorting 13 homolog A [Source:HGNC Symbol;Acc:HGNC:1908]
12. LPAR1 ENSG00000198121 3173 0.765 - 0.765 lysophosphatidic acid receptor 1 [Source:HGNC Symbol;Acc:HGNC:3166]
13. BAMBI ENSG00000095739 2641 0.764 0.764 - BMP and activin membrane bound inhibitor [Source:HGNC Symbol;Acc:HGNC:30251]
14. CGGBP1 ENSG00000163320 8529 0.763 - 0.763 CGG triplet repeat binding protein 1 [Source:HGNC Symbol;Acc:HGNC:1888]
15. TRANK1 ENSG00000168016 5941 0.762 0.762 - tetratricopeptide repeat and ankyrin repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:29011]
16. PLAGL1 ENSG00000118495 6344 0.761 0.761 - PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]
17. NFIB ENSG00000147862 8306 0.76 - 0.760 nuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]
18. GATA5 ENSG00000130700 1069 0.759 0.759 - GATA binding protein 5 [Source:HGNC Symbol;Acc:HGNC:15802]
19. OXR1 ENSG00000164830 3153 0.758 - 0.758 oxidation resistance 1 [Source:HGNC Symbol;Acc:HGNC:15822]
20. SMIM13 ENSG00000224531 2659 0.757 - 0.757 small integral membrane protein 13 [Source:HGNC Symbol;Acc:HGNC:27356]
21. ZNF148 ENSG00000163848 2766 0.757 - 0.757 zinc finger protein 148 [Source:HGNC Symbol;Acc:HGNC:12933]
22. SFRP1 ENSG00000104332 280077 0.756 0.756 - secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]
23. MAP9 ENSG00000164114 2246 0.755 - 0.755 microtubule associated protein 9 [Source:HGNC Symbol;Acc:HGNC:26118]
24. ARRDC3 ENSG00000113369 19152 0.754 - 0.754 arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]
25. ZFYVE16 ENSG00000039319 4030 0.753 - 0.753 zinc finger FYVE-type containing 16 [Source:HGNC Symbol;Acc:HGNC:20756]
26. SYPL1 ENSG00000008282 2578 0.752 - 0.752 synaptophysin like 1 [Source:HGNC Symbol;Acc:HGNC:11507]
27. SEMA5A ENSG00000112902 7369 0.752 - 0.752 semaphorin 5A [Source:HGNC Symbol;Acc:HGNC:10736]
28. PDE10A ENSG00000112541 1934 0.75 - 0.750 phosphodiesterase 10A [Source:HGNC Symbol;Acc:HGNC:8772]
29. SUCO ENSG00000094975 6635 0.75 - 0.750 SUN domain containing ossification factor [Source:HGNC Symbol;Acc:HGNC:1240]
30. TRIM23 ENSG00000113595 1251 0.748 - 0.748 tripartite motif containing 23 [Source:HGNC Symbol;Acc:HGNC:660]
31. FAM91A1 ENSG00000176853 2363 0.746 - 0.746 family with sequence similarity 91 member A1 [Source:HGNC Symbol;Acc:HGNC:26306]
32. SLC38A2 ENSG00000134294 18805 0.744 - 0.744 solute carrier family 38 member 2 [Source:HGNC Symbol;Acc:HGNC:13448]
33. SHISA3 ENSG00000178343 7060 0.744 - 0.744 shisa family member 3 [Source:HGNC Symbol;Acc:HGNC:25159]
34. ADD3 ENSG00000148700 7732 0.744 - 0.744 adducin 3 [Source:HGNC Symbol;Acc:HGNC:245]
35. CDH11 ENSG00000140937 5411 0.744 - 0.744 cadherin 11 [Source:HGNC Symbol;Acc:HGNC:1750]
36. ACSL3 ENSG00000123983 3675 0.743 - 0.743 acyl-CoA synthetase long chain family member 3 [Source:HGNC Symbol;Acc:HGNC:3570]
37. DSG2 ENSG00000046604 4179 0.743 - 0.743 desmoglein 2 [Source:HGNC Symbol;Acc:HGNC:3049]
38. HAND2 ENSG00000164107 5416 0.741 0.741 - heart and neural crest derivatives expressed 2 [Source:HGNC Symbol;Acc:HGNC:4808]
39. MKL2 18184 0.741 - 0.741 MKL1/myocardin like 2, transcript variant X15
40. PPP1CB ENSG00000213639 14737 0.741 - 0.741 protein phosphatase 1 catalytic subunit beta [Source:HGNC Symbol;Acc:HGNC:9282]
41. PDE3A ENSG00000172572 3123 0.74 0.740 - phosphodiesterase 3A [Source:HGNC Symbol;Acc:HGNC:8778]
42. RB1 ENSG00000139687 2112 0.739 - 0.739 RB transcriptional corepressor 1 [Source:HGNC Symbol;Acc:HGNC:9884]
43. MATN2 ENSG00000132561 968 0.738 0.738 - matrilin 2 [Source:HGNC Symbol;Acc:HGNC:6908]
44. AKAP9 ENSG00000127914 5166 0.738 - 0.738 A-kinase anchoring protein 9 [Source:HGNC Symbol;Acc:HGNC:379]
45. PTPRD ENSG00000153707, ENSG00000282932 13409 0.737 - 0.737 protein tyrosine phosphatase, receptor type D [Source:HGNC Symbol;Acc:HGNC:9668]
46. SPARC ENSG00000113140 39707 0.736 0.736 - secreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]
47. SEC24D ENSG00000150961 2002 0.735 - 0.735 SEC24 homolog D, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10706]
48. ZHX1 ENSG00000165156 3470 0.734 - 0.734 zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
49. DNAJB14 ENSG00000164031 2586 0.733 - 0.733 DnaJ heat shock protein family (Hsp40) member B14 [Source:HGNC Symbol;Acc:HGNC:25881]
50. RBM12 ENSG00000244462 9908 0.733 - 0.733 RNA binding motif protein 12 [Source:HGNC Symbol;Acc:HGNC:9898]
51. ENAH ENSG00000154380 34591 0.733 - 0.733 ENAH, actin regulator [Source:HGNC Symbol;Acc:HGNC:18271]
52. ITGA3 ENSG00000005884 402 0.732 0.732 - integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]
53. ZNF43 ENSG00000198521, ENSG00000279566 2364 0.732 - 0.732 zinc finger protein 43 [Source:HGNC Symbol;Acc:HGNC:13109]
54. COL3A1 ENSG00000168542 140021 0.732 0.732 - collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201]
55. NRK ENSG00000123572 4309 0.732 0.732 - Nik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]
56. PGAP1 ENSG00000197121 3543 0.731 - 0.731 post-GPI attachment to proteins 1 [Source:HGNC Symbol;Acc:HGNC:25712]
57. SP3 ENSG00000172845 6798 0.73 - 0.730 Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]
58. GULP1 ENSG00000144366 2903 0.73 - 0.730 GULP, engulfment adaptor PTB domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18649]
59. MAP3K1 ENSG00000095015 8341 0.73 - 0.730 mitogen-activated protein kinase kinase kinase 1 [Source:HGNC Symbol;Acc:HGNC:6848]
60. TCAF1 ENSG00000198420 4902 0.73 - 0.730 TRPM8 channel associated factor 1 [Source:HGNC Symbol;Acc:HGNC:22201]
61. TMEM263 ENSG00000151135 3056 0.729 - 0.729 transmembrane protein 263 [Source:HGNC Symbol;Acc:HGNC:28281]
62. ATP2B4 ENSG00000058668 5432 0.729 0.729 - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
63. EZR ENSG00000092820 3208 0.728 0.728 - ezrin [Source:HGNC Symbol;Acc:HGNC:12691]
64. PTAR1 ENSG00000188647 4369 0.724 - 0.724 protein prenyltransferase alpha subunit repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:30449]
65. GCA ENSG00000115271 1640 0.724 0.724 - grancalcin [Source:HGNC Symbol;Acc:HGNC:15990]
66. DNAJC21 ENSG00000168724 1786 0.723 - 0.723 DnaJ heat shock protein family (Hsp40) member C21 [Source:HGNC Symbol;Acc:HGNC:27030]
67. CARNS1 ENSG00000172508 249 0.723 0.723 - carnosine synthase 1 [Source:HGNC Symbol;Acc:HGNC:29268]
68. FLRT3 ENSG00000125848 10097 0.723 - 0.723 fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
69. GOPC ENSG00000047932 5643 0.723 - 0.723 golgi associated PDZ and coiled-coil motif containing [Source:HGNC Symbol;Acc:HGNC:17643]
70. KRT18 ENSG00000111057 1738 0.722 0.722 - keratin 18 [Source:HGNC Symbol;Acc:HGNC:6430]
71. KCTD12 ENSG00000178695 23035 0.721 0.721 - potassium channel tetramerization domain containing 12 [Source:HGNC Symbol;Acc:HGNC:14678]
72. RNF111 ENSG00000157450 1792 0.721 - 0.721 ring finger protein 111 [Source:HGNC Symbol;Acc:HGNC:17384]
73. SPIN4 ENSG00000186767 2851 0.721 - 0.721 spindlin family member 4 [Source:HGNC Symbol;Acc:HGNC:27040]
74. WT1 ENSG00000184937 5369 0.72 0.720 - Wilms tumor 1 [Source:HGNC Symbol;Acc:HGNC:12796]
75. E2F3 ENSG00000112242 3842 0.72 - 0.720 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
76. ROR1 ENSG00000185483 9648 0.72 0.720 - receptor tyrosine kinase like orphan receptor 1 [Source:HGNC Symbol;Acc:HGNC:10256]
77. ZNF92 ENSG00000146757 1829 0.719 - 0.719 zinc finger protein 92 [Source:HGNC Symbol;Acc:HGNC:13168]
78. MTF2 ENSG00000143033 11940 0.718 - 0.718 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:29535]
79. BROX ENSG00000162819 1489 0.718 - 0.718 BRO1 domain and CAAX motif containing [Source:HGNC Symbol;Acc:HGNC:26512]
80. CCNG2 ENSG00000138764 6322 0.718 - 0.718 cyclin G2 [Source:HGNC Symbol;Acc:HGNC:1593]
81. RHOBTB3 ENSG00000164292 20064 0.718 - 0.718 Rho related BTB domain containing 3 [Source:HGNC Symbol;Acc:HGNC:18757]
82. GABPA ENSG00000154727 1493 0.717 - 0.717 GA binding protein transcription factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:4071]
83. PPM1A ENSG00000100614 8709 0.717 - 0.717 protein phosphatase, Mg2+/Mn2+ dependent 1A [Source:HGNC Symbol;Acc:HGNC:9275]
84. ITGAV ENSG00000138448 3664 0.715 - 0.715 integrin subunit alpha V [Source:HGNC Symbol;Acc:HGNC:6150]
85. IREB2 ENSG00000136381 5421 0.715 - 0.715 iron responsive element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6115]
86. ATRX ENSG00000085224 27422 0.714 - 0.714 ATRX, chromatin remodeler [Source:HGNC Symbol;Acc:HGNC:886]
87. SLC5A3 ENSG00000198743 5045 0.713 - 0.713 solute carrier family 5 member 3 [Source:HGNC Symbol;Acc:HGNC:11038]
88. CEP350 ENSG00000135837 5480 0.713 - 0.713 centrosomal protein 350 [Source:HGNC Symbol;Acc:HGNC:24238]
89. PDE11A ENSG00000128655, ENSG00000284741 1225 0.713 0.713 - phosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]
90. EIF3A ENSG00000107581 10837 0.713 - 0.713 eukaryotic translation initiation factor 3 subunit A [Source:HGNC Symbol;Acc:HGNC:3271]
91. RBM26 ENSG00000139746 5159 0.713 - 0.713 RNA binding motif protein 26 [Source:HGNC Symbol;Acc:HGNC:20327]
92. ADAM10 ENSG00000137845 5981 0.712 - 0.712 ADAM metallopeptidase domain 10 [Source:HGNC Symbol;Acc:HGNC:188]
93. KIF5B ENSG00000170759 16732 0.712 - 0.712 kinesin family member 5B [Source:HGNC Symbol;Acc:HGNC:6324]
94. KRT8 ENSG00000170421 12050 0.712 0.712 - keratin 8 [Source:HGNC Symbol;Acc:HGNC:6446]
95. ZEB2 ENSG00000169554 6472 0.711 - 0.711 zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]
96. PCNP ENSG00000081154 9215 0.711 - 0.711 PEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:HGNC:30023]
97. KBTBD7 ENSG00000120696 992 0.71 - 0.710 kelch repeat and BTB domain containing 7 [Source:HGNC Symbol;Acc:HGNC:25266]
98. ETNK1 ENSG00000139163 6151 0.71 - 0.710 ethanolamine kinase 1 [Source:HGNC Symbol;Acc:HGNC:24649]
99. ZFHX4 ENSG00000091656 12505 0.71 - 0.710 zinc finger homeobox 4 [Source:HGNC Symbol;Acc:HGNC:30939]
100. GATA6-AS1 ENSG00000266010 839 0.71 0.710 - GATA6 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48840]

There are 28 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA