Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USP53

Gene Name Gene ID Reads Annotation
USP53 USP53 5










Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP53 USP53 5 4 1.000 1.000 1.000 - - - - 1.000 -
2. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 2 1.000 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
3. CR628395.1 ENSDARG00000116298 75 2 1.000 1.000 - - - - - - -
4. cnnm4 cnnm4 2 1.987 - 1.000 0.987 - - - - - -
5. SLC38A8 SLC38A8 17 1.802 1.000 0.802 - - - - - - -
6. si:dkey-222f2.1 ENSDARG00000043242 192 1.774 0.774 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
7. zgc:163077 ENSDARG00000101593 60 1.767 - 1.000 0.767 - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
8. zp3a.1 ENSDARG00000042129 18 1.736 - 1.000 0.736 - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
9. r3hcc1 ENSDARG00000099593 188 1.724 0.805 0.919 - - - - - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
10. ODF3L2 40 1.701 0.701 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
11. BX465841.1 BX465841.1 47 1.658 0.752 0.906 - - - - - - -
12. ficd ENSDARG00000035595 129 1.628 0.826 0.802 - - - - - - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
13. tnfsf13b ENSDARG00000012945 54 1.572 - 0.802 0.770 - - - - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
14. bgna ENSDARG00000017884 9 1 - 1.000 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
15. gprc6a ENSDARG00000005371 7 1 - 1.000 - - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
16. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
17. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
18. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -
19. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
20. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - 1.000 - - - - - - -
21. BX548021.2 BX548021.2 4 1 - - - - - - - 1.000 -
22. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
23. cyp1c2 ENSDARG00000101789 3 1 - - - - - - - 1.000 - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
24. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
25. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
26. PBRM1 ENSDARG00000003877 225 1 - 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
27. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
28. admb ENSDARG00000069027 67 1 1.000 - - - - - - - - adrenomedullin b [Source:ZFIN;Acc:ZDB-GENE-120221-6]
29. CLDND1_1 CLDND1_1 50 1 - 1.000 - - - - - - -
30. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
31. BX649417.1 ENSDARG00000117387 1 1 - 1.000 - - - - - - -
32. drd4-rs ENSDARG00000001912 45 1 - 1.000 - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
33. gyg2 ENSDARG00000033380 12 1 - 1.000 - - - - - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
34. zgc:171544 zgc:171544 11 1 - 1.000 - - - - - - -
35. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - 1.000 - - - - - - -
36. lsm14b ENSDARG00000025386 23 1 - 1.000 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
37. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - - 1.000 - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
38. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
39. caps2 ENSDARG00000058486 4 1 1.000 - - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
40. si:ch211-106h4.9 ENSDARG00000075706 36 1 - 1.000 - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
41. si:dkey-277m11.2 ENSDARG00000094879 15 1 - 1.000 - - - - - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
42. si:ch73-343l4.8 ENSDARG00000077975 4 1 - - - - - - - 1.000 - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
43. FAM183B FAM183B 25 1 - 1.000 - - - - - - -
44. CR352256.1 CR352256.1 3 1 1.000 - - - - - - - -
45. zgc:123217 ENSDARG00000059026 292 1 - 1.000 - - - - - - - zgc:123217 [Source:ZFIN;Acc:ZDB-GENE-051113-188]
46. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
47. si:dkey-250k15.4 ENSDARG00000092169 19 1 - 1.000 - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
48. tlcd1 ENSDARG00000002391 90 1 1.000 - - - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]
49. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
50. olfml2bb ENSDARG00000021480 256 1 - 1.000 - - - - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
51. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
52. si:dkey-20i20.12 si:dkey-20i20.12 7 1 - 1.000 - - - - - - -
53. FP103003.1_1 FP103003.1_1 6 1 1.000 - - - - - - - -
54. si:dkey-176g1.4 si:dkey-176g1.4 1 1 - 1.000 - - - - - - -
55. zgc:136908 ENSDARG00000011983 97 1 - 1.000 - - - - - - - zgc:136908 [Source:ZFIN;Acc:ZDB-GENE-060312-22]
56. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - 1.000 - - - - - - -
57. nr2e1 ENSDARG00000017107 340 1 1.000 - - - - - - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
58. BX004980.1 ENSDARG00000099680 10 1 - 1.000 - - - - - - -
59. HMBOX1 HMBOX1 67 1 - 1.000 - - - - - - -
60. si:dkey-3b8.4 si:dkey-3b8.4 13 1 1.000 - - - - - - - -
61. si:dkeyp-3f10.12 ENSDARG00000105791 3 1 - 1.000 - - - - - - - si:dkeyp-3f10.12 [Source:ZFIN;Acc:ZDB-GENE-081104-20]
62. si:ch211-119c24.1 si:ch211-119c24.1 17 1 - 1.000 - - - - - - -
63. SPAG16 7 1 1.000 - - - - - - - - sperm associated antigen 16
64. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
65. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
66. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
67. ADTRP ADTRP 2 1 - 1.000 - - - - - - -
68. RP1L1 RP1L1 15 1 - 1.000 - - - - - - -
69. fam228a ENSDARG00000042936, ENSDARG00000114092 30 1 1.000 - - - - - - - - family with sequence similarity 228, member A [Source:ZFIN;Acc:ZDB-GENE-041014-83]
70. tcf3a ENSDARG00000005915 12 1 1.000 - - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
71. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
72. sema6d ENSDARG00000002748 133 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
73. chrna7 ENSDARG00000101702 50 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
74. CABZ01049058.1 CABZ01049058.1 7 1 1.000 - - - - - - - -
75. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 1.000 - - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
76. svilb_1 ENSDARG00000014651 60 1 - 1.000 - - - - - - - supervillin b [Source:ZFIN;Acc:ZDB-GENE-081104-411]
77. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 1.000 - - - - - - - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
78. PLB1 PLB1 20 1 1.000 - - - - - - - -
79. npdc1 npdc1 221 1 1.000 - - - - - - - -
80. ctso ENSDARG00000052855 29 1 - 1.000 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
81. MPZL2 MPZL2 31 1 - 1.000 - - - - - - -
82. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
83. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - - 1.000 -
84. evi5b ENSDARG00000070839 239 1 - 1.000 - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
85. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
86. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - 1.000 - - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
87. fam166b ENSDARG00000100292 14 1 1.000 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
88. ENSDARG00000089152 ENSDARG00000089152 12 1 1.000 - - - - - - - -
89. CR790363.2 CR790363.2 2 1 - - - - - - - 1.000 -
90. fam189a1 ENSDARG00000053380 11 1 - - - - - - - 1.000 - family with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
91. antxr1d ENSDARG00000060845 10 1 - - - - - - - 1.000 - ANTXR cell adhesion molecule 1d [Source:ZFIN;Acc:ZDB-GENE-090313-28]
92. sst2 ENSDARG00000014190 617 1 1.000 - - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
93. si:ch211-229i14.2 ENSDARG00000086048 19 1 - 1.000 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
94. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
95. sid1 ENSDARG00000095540 1 1 - 1.000 - - - - - - - secreted immunoglobulin domain 1 [Source:ZFIN;Acc:ZDB-GENE-020620-1]
96. CD53 CD53 108 1 1.000 - - - - - - - -
97. ebi3 ENSDARG00000053620 5 1 - 1.000 - - - - - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
98. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
99. C10H5orf42 C10H5orf42 5 1 1.000 - - - - - - - -
100. si:ch211-151h10.2 ENSDARG00000068250 14 1 - 1.000 - - - - - - - si:ch211-151h10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-29]

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA