Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USP53

Gene Name Gene ID Reads Annotation
USP53 USP53 5










Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP53 USP53 5 4 1.000 1.000 1.000 - - - - 1.000 -
2. CR628395.1 ENSDARG00000116298 75 2 1.000 1.000 - - - - - - -
3. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 2 1.000 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
4. cnnm4 cnnm4 2 1.987 - 1.000 0.987 - - - - - -
5. SLC38A8 SLC38A8 17 1.802 1.000 0.802 - - - - - - -
6. si:dkey-222f2.1 ENSDARG00000043242 192 1.774 0.774 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
7. zgc:163077 ENSDARG00000101593 60 1.767 - 1.000 0.767 - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
8. zp3a.1 ENSDARG00000042129 18 1.736 - 1.000 0.736 - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
9. r3hcc1 ENSDARG00000099593 188 1.724 0.805 0.919 - - - - - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
10. ODF3L2 40 1.701 0.701 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
11. BX465841.1 BX465841.1 47 1.658 0.752 0.906 - - - - - - -
12. ficd ENSDARG00000035595 129 1.628 0.826 0.802 - - - - - - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
13. tnfsf13b ENSDARG00000012945 54 1.572 - 0.802 0.770 - - - - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
14. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
15. vax1 ENSDARG00000021916, ENSDARG00000114230 152 1 - 1.000 - - - - - - - ventral anterior homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030904-9]
16. FASN ENSDARG00000087657 18 1 - 1.000 - - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
17. SPAG16 7 1 1.000 - - - - - - - - sperm associated antigen 16
18. sid1 ENSDARG00000095540 1 1 - 1.000 - - - - - - - secreted immunoglobulin domain 1 [Source:ZFIN;Acc:ZDB-GENE-020620-1]
19. CU915778.2 CU915778.2 194 1 1.000 - - - - - - - -
20. si:ch73-44m9.1 ENSDARG00000077115 3 1 - 1.000 - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
21. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
22. CD53 CD53 108 1 1.000 - - - - - - - -
23. si:ch211-106h4.9 ENSDARG00000075706 36 1 - 1.000 - - - - - - - si:ch211-106h4.9 [Source:ZFIN;Acc:ZDB-GENE-070705-17]
24. CR381673.2 ENSDARG00000103241 7 1 - - - - - - - 1.000 -
25. klhl42 ENSDARG00000006011 46 1 1.000 - - - - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
26. tlr5a ENSDARG00000044415 3 1 - 1.000 - - - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
27. caps2 ENSDARG00000058486 4 1 1.000 - - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
28. lamb1a_1 ENSDARG00000101209 13 1 1.000 - - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
29. fam189a1 ENSDARG00000053380 11 1 - - - - - - - 1.000 - family with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
30. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
31. dio2 ENSDARG00000094857 17 1 1.000 - - - - - - - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
32. fnbp1 fnbp1 5 1 1.000 - - - - - - - -
33. si:ch211-196n4.9 si:ch211-196n4.9 1 1 - 1.000 - - - - - - -
34. si:ch211-117m20.4 ENSDARG00000094286 7 1 - 1.000 - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
35. CABZ01070007.1 CABZ01070007.1 5 1 - 1.000 - - - - - - -
36. TEAD1 TEAD1 43 1 1.000 - - - - - - - -
37. rictora ENSDARG00000100867 20 1 - 1.000 - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
38. drd4-rs ENSDARG00000001912 45 1 - 1.000 - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
39. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - 1.000 - - - - - - -
40. klc4_1 ENSDARG00000086985 22 1 1.000 - - - - - - - - kinesin light chain 4 [Source:ZFIN;Acc:ZDB-GENE-050417-350]
41. crybb1l2 ENSDARG00000016793 723 1 1.000 - - - - - - - - crystallin, beta B1, like 2 [Source:ZFIN;Acc:ZDB-GENE-070822-18]
42. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
43. SNORA77 SNORA77 2 1 - - - - - - - 1.000 -
44. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
45. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
46. st3gal1l ENSDARG00000079310 10 1 - 1.000 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
47. MPZL2 MPZL2 31 1 - 1.000 - - - - - - -
48. CLEC17A CLEC17A 42 1 - 1.000 - - - - - - -
49. rgs13 ENSDARG00000017653 8 1 1.000 - - - - - - - - regulator of G protein signaling 13 [Source:ZFIN;Acc:ZDB-GENE-070410-138]
50. LRAT LRAT 12 1 - 1.000 - - - - - - -
51. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
52. si:dkey-71l1.1 ENSDARG00000052411 11 1 1.000 - - - - - - - - si:dkey-71l1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-489]
53. frmd7 ENSDARG00000068958 1 1 - - - - - - - 1.000 - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
54. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
55. si:ch73-343l4.8 ENSDARG00000077975 4 1 - - - - - - - 1.000 - si:ch73-343l4.8 [Source:ZFIN;Acc:ZDB-GENE-090313-159]
56. SNORD83 SNORD83 43 1 - 1.000 - - - - - - -
57. si:ch211-161n3.3 ENSDARG00000092989 9 1 - 1.000 - - - - - - - si:ch211-161n3.3 [Source:ZFIN;Acc:ZDB-GENE-041210-102]
58. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - 1.000 - - - - - - -
59. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
60. crygmx ENSDARG00000053862 482 1 1.000 - - - - - - - - crystallin, gamma MX [Source:ZFIN;Acc:ZDB-GENE-030131-7732]
61. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
62. PLB1 PLB1 20 1 1.000 - - - - - - - -
63. ugt5e1 ENSDARG00000058048 25 1 - 1.000 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
64. fam45a ENSDARG00000062965, ENSDARG00000115900 14 1 - 1.000 - - - - - - - family with sequence similarity 45, member A [Source:ZFIN;Acc:ZDB-GENE-030131-3548]
65. BX548021.2 BX548021.2 4 1 - - - - - - - 1.000 -
66. si:ch211-131e11.19 27 1 - - - - - - - 1.000 - si:ch211-131e11.19
67. ADTRP ADTRP 2 1 - 1.000 - - - - - - -
68. rp1 ENSDARG00000077687 18 1 1.000 - - - - - - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
69. BX601644.1 ENSDARG00000090632 2 1 1.000 - - - - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
70. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - 1.000 - - - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
71. otx1a 1607 1 1.000 - - - - - - - - orthodenticle homeobox 1a
72. CABZ01061914.2 CABZ01061914.2 2 1 - 1.000 - - - - - - -
73. MFAP4_4 MFAP4_4 9 1 - 1.000 - - - - - - -
74. gabpb1 ENSDARG00000023659 26 1 1.000 - - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
75. npdc1 npdc1 221 1 1.000 - - - - - - - -
76. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
77. si:dkey-105n5.3 si:dkey-105n5.3 9 1 1.000 - - - - - - - -
78. HMBOX1 HMBOX1 67 1 - 1.000 - - - - - - -
79. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
80. si:dkey-3d18.5 ENSDARG00000096239 3 1 1.000 - - - - - - - - si:dkey-3d18.5 [Source:ZFIN;Acc:ZDB-GENE-120215-143]
81. si:dkey-247i3.6 ENSDARG00000092139, ENSDARG00000094308, ENSDARG00000100214 22 1 1.000 - - - - - - - - si:dkey-247i3.6 [Source:ZFIN;Acc:ZDB-GENE-110913-83]
82. si:dkey-176g1.4 si:dkey-176g1.4 1 1 - 1.000 - - - - - - -
83. si:ch211-171b20.3 ENSDARG00000094794 2 1 1.000 - - - - - - - - si:ch211-171b20.3 [Source:ZFIN;Acc:ZDB-GENE-091204-278]
84. galca ENSDARG00000037064 12 1 - 1.000 - - - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
85. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - 1.000 - - - - - - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
86. TMPRSS7 5 1 - 1.000 - - - - - - - transmembrane protease, serine 7
87. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - - 1.000 - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
88. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
89. serpinb1l2 ENSDARG00000070396 37 1 - 1.000 - - - - - - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
90. FAM183B FAM183B 25 1 - 1.000 - - - - - - -
91. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 1.000 - - - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
92. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
93. gyg2 ENSDARG00000033380 12 1 - 1.000 - - - - - - - glycogenin 2 [Source:ZFIN;Acc:ZDB-GENE-080723-74]
94. gprc6a ENSDARG00000005371 7 1 - 1.000 - - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
95. si:ch211-229i14.2 ENSDARG00000086048 19 1 - 1.000 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
96. si:dkey-37o8.1 ENSDARG00000071727 64 1 1.000 - - - - - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
97. MAP7_1 MAP7_1 42 1 - 1.000 - - - - - - -
98. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 1.000 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
99. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
100. si:ch211-255i3.4 ENSDARG00000095152 7 1 - 1.000 - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA