Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP53

Gene Name Gene ID Reads Annotation
USP53 USP53 5










Genes with expression patterns similar to USP53

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP53 USP53 5 4 1.000 1.000 1.000 - - - - 1.000 -
2. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 2 1.000 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
3. CR628395.1 ENSDARG00000116298 75 2 1.000 1.000 - - - - - - -
4. cnnm4 cnnm4 2 1.987 - 1.000 0.987 - - - - - -
5. SLC38A8 SLC38A8 17 1.802 1.000 0.802 - - - - - - -
6. si:dkey-222f2.1 ENSDARG00000043242 192 1.774 0.774 1.000 - - - - - - - si:dkey-222f2.1 [Source:ZFIN;Acc:ZDB-GENE-050208-726]
7. zgc:163077 ENSDARG00000101593 60 1.767 - 1.000 0.767 - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
8. zp3a.1 ENSDARG00000042129 18 1.736 - 1.000 0.736 - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
9. r3hcc1 ENSDARG00000099593 188 1.724 0.805 0.919 - - - - - - - R3H domain and coiled-coil containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-146]
10. ODF3L2 40 1.701 0.701 1.000 - - - - - - - outer dense fiber of sperm tails 3-like 2
11. BX465841.1 BX465841.1 47 1.658 0.752 0.906 - - - - - - -
12. ficd ENSDARG00000035595 129 1.628 0.826 0.802 - - - - - - - FIC domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-6588]
13. tnfsf13b ENSDARG00000012945 54 1.572 - 0.802 0.770 - - - - - - TNF superfamily member 13b [Source:ZFIN;Acc:ZDB-GENE-080204-44]
14. CABZ01070007.1 CABZ01070007.1 5 1 - 1.000 - - - - - - -
15. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - 1.000 - glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
16. si:ch211-134d5.3 si:ch211-134d5.3 1 1 - 1.000 - - - - - - -
17. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
18. tcf23 ENSDARG00000087381 6 1 1.000 - - - - - - - - transcription factor 23 [Source:ZFIN;Acc:ZDB-GENE-090806-5]
19. gabpb1 ENSDARG00000023659 26 1 1.000 - - - - - - - - GA binding protein transcription factor subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-061027-46]
20. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
21. si:ch211-117m20.4 ENSDARG00000094286 7 1 - 1.000 - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
22. chrna7 ENSDARG00000101702 50 1 1.000 - - - - - - - - cholinergic receptor, nicotinic, alpha 7 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-040108-3]
23. si:dkeyp-73d8.8 ENSDARG00000094045 17 1 1.000 - - - - - - - - si:dkeyp-73d8.8 [Source:ZFIN;Acc:ZDB-GENE-070912-684]
24. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
25. fam166b ENSDARG00000100292 14 1 1.000 - - - - - - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
26. fam189a1 ENSDARG00000053380 11 1 - - - - - - - 1.000 - family with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
27. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - - 1.000 -
28. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
29. si:ch211-131e11.19 27 1 - - - - - - - 1.000 - si:ch211-131e11.19
30. rictora ENSDARG00000100867 20 1 - 1.000 - - - - - - - RPTOR independent companion of MTOR, complex 2 a [Source:ZFIN;Acc:ZDB-GENE-060526-49]
31. BX569778.1 BX569778.1 36 1 1.000 - - - - - - - -
32. st3gal1l ENSDARG00000079310 10 1 - 1.000 - - - - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
33. CR942805.3 CR942805.3 7 1 - - - - - - - 1.000 -
34. ctso ENSDARG00000052855 29 1 - 1.000 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
35. sst2 ENSDARG00000014190 617 1 1.000 - - - - - - - - somatostatin 2 [Source:ZFIN;Acc:ZDB-GENE-010219-2]
36. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
37. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
38. si:dkey-162h11.2 si:dkey-162h11.2 257 1 1.000 - - - - - - - -
39. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - - - 1.000 - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
40. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
41. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
42. SNTB2 ENSDARG00000051763 2 1 - 1.000 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
43. CABZ01067072.1 CABZ01067072.1 17 1 1.000 - - - - - - - -
44. BX548000.1 ENSDARG00000099044 45 1 1.000 - - - - - - - -
45. zgc:171501 ENSDARG00000075375 11 1 - 1.000 - - - - - - - zgc:171501 [Source:ZFIN;Acc:ZDB-GENE-080204-10]
46. si:dkey-277m11.2 ENSDARG00000094879 15 1 - 1.000 - - - - - - - si:dkey-277m11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-285]
47. evi5b ENSDARG00000070839 239 1 - 1.000 - - - - - - - ecotropic viral integration site 5b [Source:ZFIN;Acc:ZDB-GENE-041111-244]
48. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
49. si:dkey-20i20.12 si:dkey-20i20.12 7 1 - 1.000 - - - - - - -
50. gprc6a ENSDARG00000005371 7 1 - 1.000 - - - - - - - G protein-coupled receptor, class C, group 6, member A [Source:ZFIN;Acc:ZDB-GENE-041217-22]
51. tlr5a ENSDARG00000044415 3 1 - 1.000 - - - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
52. si:dkey-259p7.1 si:dkey-259p7.1 59 1 1.000 - - - - - - - -
53. npdc1 npdc1 221 1 1.000 - - - - - - - -
54. si:ch211-196c10.13 ENSDARG00000096756 28 1 1.000 - - - - - - - - si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
55. CR352256.1 CR352256.1 3 1 1.000 - - - - - - - -
56. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 1.000 - - - - - - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
57. zgc:110353 ENSDARG00000039443 80 1 1.000 - - - - - - - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
58. c6ast4 ENSDARG00000052578 6 1 - - - - - - - 1.000 - six-cysteine containing astacin protease 4 [Source:ZFIN;Acc:ZDB-GENE-050626-100]
59. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - - 1.000 - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
60. si:dkey-37o8.1 ENSDARG00000071727 64 1 1.000 - - - - - - - - si:dkey-37o8.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5667]
61. dapp1 ENSDARG00000039535 23 1 - 1.000 - - - - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
62. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
63. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - 1.000 - - - - - - -
64. C5H9orf9 C5H9orf9 6 1 1.000 - - - - - - - -
65. frmd7 ENSDARG00000068958 1 1 - - - - - - - 1.000 - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
66. SLC22A14 SLC22A14 24 1 1.000 - - - - - - - -
67. SNORA77 SNORA77 2 1 - - - - - - - 1.000 -
68. AL929453.1 ENSDARG00000115950 31 1 - 1.000 - - - - - - -
69. ugt2b3 46 1 1.000 - - - - - - - - UDP glucuronosyltransferase 2 family, polypeptide B3
70. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
71. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
72. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
73. CR381673.2 ENSDARG00000103241 7 1 - - - - - - - 1.000 -
74. EGR4_1 EGR4_1 14 1 - 1.000 - - - - - - -
75. ft2 ENSDARG00000109567 5 1 1.000 - - - - - - - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
76. si:dkey-46c2.2 si:dkey-46c2.2 2 1 - 1.000 - - - - - - -
77. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
78. C11H1orf116 C11H1orf116 9 1 1.000 - - - - - - - -
79. atp8b3 ENSDARG00000042285 31 1 - 1.000 - - - - - - - ATPase phospholipid transporting 8B3 [Source:ZFIN;Acc:ZDB-GENE-050208-424]
80. sema6d ENSDARG00000002748 133 1 1.000 - - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
81. si:dkey-250k15.4 ENSDARG00000092169 19 1 - 1.000 - - - - - - - si:dkey-250k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-254]
82. psma6l ENSDARG00000043899 3 1 - 1.000 - - - - - - - proteasome subunit alpha 6, like [Source:ZFIN;Acc:ZDB-GENE-010502-2]
83. HMBOX1 HMBOX1 67 1 - 1.000 - - - - - - -
84. CR790363.2 CR790363.2 2 1 - - - - - - - 1.000 -
85. CD53 CD53 108 1 1.000 - - - - - - - -
86. im:7136021 ENSDARG00000054128 79 1 - 1.000 - - - - - - - im:7136021 [Source:ZFIN;Acc:ZDB-GENE-041008-74]
87. drd4-rs ENSDARG00000001912 45 1 - 1.000 - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
88. CT027762.3_1 CT027762.3_1 62 1 1.000 - - - - - - - -
89. tcf3a ENSDARG00000005915 12 1 1.000 - - - - - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
90. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
91. BX548021.2 BX548021.2 4 1 - - - - - - - 1.000 -
92. si:ch211-152p23.2 ENSDARG00000094519 4 1 1.000 - - - - - - - - si:ch211-152p23.2 [Source:ZFIN;Acc:ZDB-GENE-081104-134]
93. CYP46A1 CYP46A1 16 1 1.000 - - - - - - - -
94. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
95. caps2 ENSDARG00000058486 4 1 1.000 - - - - - - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
96. BX004980.1 ENSDARG00000099680 10 1 - 1.000 - - - - - - -
97. fgf10b ENSDARG00000100475 17 1 - 1.000 - - - - - - - fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
98. CR762484.2 CR762484.2 42 1 - 1.000 - - - - - - -
99. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 1 1.000 - - - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
100. tlcd1 ENSDARG00000002391 90 1 1.000 - - - - - - - - TLC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041010-173]

There are 645 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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