Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP5

Gene Name Gene ID Reads Annotation
USP5 ENSGALG00000014525 21883 ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]











Genes with expression patterns similar to USP5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP5 ENSGALG00000014525 21883 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
2. NEK7 ENSGALG00000002216 4532 1.664 - - - 0.752 - - 0.912 - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
3. LMO4 ENSGALG00000006252 3686 1.659 - - - - - - 0.895 0.764 - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
4. ASAP2 ENSGALG00000016419 1393 1.659 - - - - - - 0.897 0.762 - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
5. PANK1 ENSGALG00000006431 2910 1.658 - - - 0.757 - - 0.901 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
6. COMMD1 ENSGALG00000008931 12202 1.634 - - - - - - 0.731 0.903 - - copper metabolism domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23024]
7. RNF8 ENSGALG00000023256 5495 1.624 - - - 0.780 - - 0.844 - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
8. COPA ENSGALG00000009153 11618 1.624 - - - 0.798 - - - 0.826 - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
9. ENSGALG00000026433 ENSGALG00000026433 14463 1.604 - - 0.737 - - - 0.867 - - -
10. COG7 ENSGALG00000006156 4072 1.598 - - - 0.765 - - 0.833 - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
11. ADAR ENSGALG00000021475 6004 1.583 - - - 0.731 - - 0.852 - - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
12. PGD ENSGALG00000002797 15115 1.569 - - - 0.773 - - 0.796 - - - phosphogluconate dehydrogenase [Source:NCBI gene;Acc:419450]
13. SRSF11 ENSGALG00000011305 10435 1.563 - - - 0.720 - - 0.843 - - - serine and arginine rich splicing factor 11 [Source:NCBI gene;Acc:424714]
14. CNOT2 ENSGALG00000010042 7612 1.547 - - - - - - 0.779 0.768 - - CCR4-NOT transcription complex subunit 2 [Source:NCBI gene;Acc:417851]
15. CCNI ENSGALG00000011457 3203 1.537 - - - 0.773 - - - 0.764 - - cyclin I [Source:HGNC Symbol;Acc:HGNC:1595]
16. GARS ENSGALG00000005694 18264 1.525 - - 0.726 - - - 0.799 - - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
17. TRAPPC12 ENSGALG00000016387 2593 1.495 - - - 0.740 - - - 0.755 - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
18. TMCO1 ENSGALG00000033460 22822 1.494 - - 0.763 - - - 0.731 - - - transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
19. CYB5R3 ENSGALG00000014122 7664 1.459 - - - 0.714 - - - 0.745 - - cytochrome b5 reductase 3 [Source:NCBI gene;Acc:418220]
20. TMEM14A ENSGALG00000019894 5279 0.947 - - - - - - 0.947 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
21. LYPLA1 ENSGALG00000040421 14720 0.947 - - - - - - - 0.947 - - lysophospholipase I [Source:HGNC Symbol;Acc:HGNC:6737]
22. DDX42 ENSGALG00000000581 8780 0.943 - - - - - - 0.943 - - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
23. PWP1 ENSGALG00000012631 10536 0.939 - - - - - - 0.939 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
24. COX20 ENSGALG00000027440 5881 0.935 - - - - - - 0.935 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
25. PITPNB ENSGALG00000005654 21578 0.933 - - - - - - 0.933 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
26. ZCCHC8 ENSGALG00000004486 3201 0.932 - - - - - - 0.932 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
27. PDP1 ENSGALG00000034876 2965 0.93 - - - - - - 0.930 - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
28. CEBPZ ENSGALG00000040335 6353 0.93 - - - - - - - 0.930 - - CCAAT enhancer binding protein zeta [Source:NCBI gene;Acc:421474]
29. MRPL23 ENSGALG00000006561 13737 0.927 - - - - - - 0.927 - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
30. C9orf85 ENSGALG00000026001 4110 0.925 - - - - - - 0.925 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
31. FOXK2 ENSGALG00000001577 6346 0.925 - - - - - - 0.925 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
32. MLLT10 ENSGALG00000007928 4022 0.925 - - - - - - 0.925 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
33. DLAT ENSGALG00000007904 3297 0.923 - - - - - - 0.923 - - - dihydrolipoamide S-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2896]
34. TSPAN13 ENSGALG00000027240 8999 0.921 - - - - - - 0.921 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
35. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.921 - - - - - - 0.921 - - -
36. COMMD5 ENSGALG00000008867 12173 0.92 - - - - - - 0.920 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
37. TBC1D12 ENSGALG00000034044 5588 0.918 - - - - - - 0.918 - - - TBC1 domain family member 12 [Source:HGNC Symbol;Acc:HGNC:29082]
38. COG4 ENSGALG00000002603 4485 0.918 - - - - - - 0.918 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
39. PPP6R3 ENSGALG00000007037 10919 0.918 - - - - - - - 0.918 - - protein phosphatase 6 regulatory subunit 3 [Source:NCBI gene;Acc:423116]
40. ETV5 ENSGALG00000005768 9679 0.918 - - - - - - 0.918 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
41. ENSGALG00000006671 ENSGALG00000006671 4194 0.917 - - - - - - - 0.917 - -
42. CCDC53 CCDC53 3732 0.917 - - - - - - 0.917 - - -
43. ZBTB26 ENSGALG00000042762 1920 0.916 - - - - - - 0.916 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
44. ACTR10 ENSGALG00000012041 2752 0.915 - - - - - - 0.915 - - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
45. C7orf50 ENSGALG00000004055 5786 0.915 - - - - - - 0.915 - - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
46. SALL1 ENSGALG00000039238 3740 0.915 - - - - - - 0.915 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
47. ZER1 ENSGALG00000004659 1635 0.914 - - - - - - 0.914 - - - zyg-11 related cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:30960]
48. B4GALNT4 ENSGALG00000004250 2150 0.912 - - - - - - 0.912 - - - beta-1,4-N-acetyl-galactosaminyltransferase 4 [Source:HGNC Symbol;Acc:HGNC:26315]
49. TRDMT1 ENSGALG00000008686 2663 0.911 - - - - - - 0.911 - - - tRNA aspartic acid methyltransferase 1 [Source:NCBI gene;Acc:420520]
50. NNT ENSGALG00000014869 8496 0.911 - - - - - - 0.911 - - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
51. ARL5A ENSGALG00000041099 4592 0.911 - - - - - - 0.911 - - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
52. C12orf66 ENSGALG00000027682 2110 0.911 - - - - - - 0.911 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
53. C1GALT1 ENSGALG00000009752 7148 0.911 - - - - - - 0.911 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
54. EML1 1941 0.909 - - - - - - 0.909 - - - echinoderm microtubule associated protein like 1, transcript variant X11
55. MRPS35 ENSGALG00000036730 6327 0.908 - - - - - - 0.908 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
56. RHOT2 ENSGALG00000002497 1744 0.908 - - - - - - 0.908 - - - ras homolog family member T2 [Source:NCBI gene;Acc:427651]
57. AP1AR ENSGALG00000028807 2398 0.908 - - - - - - 0.908 - - - adaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]
58. REXO4 ENSGALG00000030609 2926 0.907 - - - - - - 0.907 - - - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
59. QSER1 ENSGALG00000012030 4490 0.905 - - - - - - 0.905 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
60. CLN6 ENSGALG00000007981 5656 0.904 - - - - - - 0.904 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
61. RNF144A ENSGALG00000028709 2855 0.903 - - - - - - 0.903 - - - ring finger protein 144A, transcript variant X1
62. FBXW7 ENSGALG00000010103 5982 0.903 - - - - - - 0.903 - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
63. DNTTIP2 4528 0.903 - - - - - - 0.903 - - - deoxynucleotidyltransferase, terminal, interacting protein 2, transcript variant X3
64. ITFG1 ENSGALG00000004049 2934 0.903 - - - - - - 0.903 - - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
65. BAG4 ENSGALG00000003254 5751 0.903 - - - - - - 0.903 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
66. ENSGALG00000000514 ENSGALG00000000514 9906 0.903 - - - - - - 0.903 - - -
67. WDR12 ENSGALG00000008470 7654 0.902 - - - - - - 0.902 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
68. CCDC132 CCDC132 2632 0.902 - - - - - - 0.902 - - -
69. TIRAP ENSGALG00000040224 2578 0.902 - - - - - - 0.902 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
70. C11H19ORF12 C11H19ORF12 5149 0.901 - - - - - - 0.901 - - -
71. GARNL3 ENSGALG00000000847 3423 0.9 - - - - - - 0.900 - - - GTPase activating Rap/RanGAP domain like 3 [Source:NCBI gene;Acc:417087]
72. ATXN7 ENSGALG00000007302 2596 0.9 - - - - - - 0.900 - - - ataxin 7, transcript variant X3
73. PLEKHA5 ENSGALG00000013134 3656 0.9 - - - - - - 0.900 - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
74. NARFL ENSGALG00000005365 2668 0.899 - - - - - - 0.899 - - - nuclear prelamin A recognition factor like [Source:NCBI gene;Acc:416535]
75. MYEOV2 MYEOV2 5155 0.899 - - - - - - 0.899 - - -
76. ABHD13 ENSGALG00000016853 4975 0.899 - - - - - - 0.899 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
77. ENSGALG00000007035 ENSGALG00000007035 8473 0.899 - - - - - - 0.899 - - -
78. BEND5 ENSGALG00000010505 3298 0.898 - - - - - - 0.898 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
79. ANXA11 ENSGALG00000043826 5189 0.898 - - - - - - 0.898 - - - annexin A11 [Source:NCBI gene;Acc:423637]
80. MTFR1L ENSGALG00000000998 3457 0.898 - - - - - - 0.898 - - - mitochondrial fission regulator 1 like [Source:HGNC Symbol;Acc:HGNC:28836]
81. IFT52 ENSGALG00000003523 1858 0.897 - - - - - - 0.897 - - - intraflagellar transport 52 [Source:NCBI gene;Acc:419165]
82. NAPEPLD ENSGALG00000008285 1295 0.896 - - - - - - 0.896 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
83. RDM1 ENSGALG00000000243 3388 0.896 - - - - - - 0.896 - - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
84. CDC16 ENSGALG00000016816 2162 0.896 - - - - - - 0.896 - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
85. PGRMC1 ENSGALG00000020260 19059 0.895 - - - - - - 0.895 - - - progesterone receptor membrane component 1 [Source:NCBI gene;Acc:772196]
86. NFRKB ENSGALG00000001306 4469 0.895 - - - - - - 0.895 - - - nuclear factor related to kappaB binding protein [Source:NCBI gene;Acc:419730]
87. LIG3 ENSGALG00000002288 7198 0.895 - - - - - - 0.895 - - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
88. CASP6 ENSGALG00000012186 6639 0.895 - - - - - - 0.895 - - - caspase 6 [Source:NCBI gene;Acc:395477]
89. PPIL2 ENSGALG00000042052 4349 0.894 - - - - - - 0.894 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
90. CAPN1 ENSGALG00000041685 4011 0.894 - - - - - - 0.894 - - - calpain 1 [Source:NCBI gene;Acc:693249]
91. BTBD7 4136 0.894 - - - - - - 0.894 - - - BTB domain containing 7, transcript variant X2
92. LYRM4 ENSGALG00000027339 2917 0.894 - - - - - - 0.894 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
93. EPB41L1 ENSGALG00000034171 3616 0.894 - - - - - - 0.894 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
94. GNE ENSGALG00000015331 1577 0.893 - - - - - - 0.893 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
95. TAF1B ENSGALG00000016437 2318 0.892 - - - - - - 0.892 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
96. BUD13_1 ENSGALG00000025882 1118 0.891 - - - - - - 0.891 - - - BUD13 homolog [Source:NCBI gene;Acc:428248]
97. TJP1 ENSGALG00000042552 3081 0.891 - - - - - - 0.891 - - - tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827]
98. DNAJB6 ENSGALG00000006477 3804 0.89 - - - - - - 0.890 - - - DnaJ heat shock protein family (Hsp40) member B6 [Source:NCBI gene;Acc:420448]
99. FBXO28 ENSGALG00000009331 2871 0.89 - - - - - - 0.890 - - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
100. CALCOCO2 ENSGALG00000001525 3121 0.889 - - - - - - 0.889 - - - calcium binding and coiled-coil domain 2 [Source:HGNC Symbol;Acc:HGNC:29912]

There are 549 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA