Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP48

Gene Name Gene ID Reads Annotation
USP48 ENSGALG00000030857 471 ubiquitin specific peptidase 48 [Source:NCBI gene;Acc:769457]











Genes with expression patterns similar to USP48

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP48 ENSGALG00000030857 471 9 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 48 [Source:NCBI gene;Acc:769457]
2. SSBP2 ENSGALG00000023089 131 0.851 - - - - - - - 0.851 - - single stranded DNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15831]
3. LHFP 167 0.843 - - - - - - - 0.843 - - lipoma HMGIC fusion partner
4. RAB43 ENSGALG00000005021 5 0.832 - - - - - - - 0.832 - - RAB43, member RAS oncogene family [Source:NCBI gene;Acc:415970]
5. GABRA2 ENSGALG00000014206 19 0.827 - - - - - - - 0.827 - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
6. INSC ENSGALG00000032558 74 0.825 - - - - - - - 0.825 - - INSC, spindle orientation adaptor protein [Source:HGNC Symbol;Acc:HGNC:33116]
7. PRKRIR PRKRIR 46 0.825 - - - - - - - 0.825 - -
8. TOM1L2 ENSGALG00000004902 89 0.823 - - - - - - - 0.823 - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
9. SWAP70 ENSGALG00000005750 32 0.822 - - - - - - - 0.822 - - switching B cell complex subunit SWAP70 [Source:NCBI gene;Acc:423044]
10. ALKBH3 ENSGALG00000041309 7 0.821 - - - - - - - 0.821 - - alkB homolog 3, alpha-ketoglutaratedependent dioxygenase [Source:NCBI gene;Acc:423169]
11. FAM214B ENSGALG00000002069, ENSGALG00000038279 213 0.821 - - - - - - - 0.821 - - family with sequence similarity 214 member B, transcript variant X14
12. snoZ39 snoZ39 2 0.821 - - - - - - - 0.821 - -
13. DBN1 ENSGALG00000033405 216 0.821 - - - - - - - 0.821 - - drebrin 1 [Source:NCBI gene;Acc:396496]
14. TREM-B1 ENSGALG00000003361 8 0.821 - - - - - - - 0.821 - - triggering receptor expressed on myeloid cells B1 [Source:NCBI gene;Acc:768535]
15. ACACB 6 0.821 - - - - - - - 0.821 - - acetyl-CoA carboxylase beta
16. SPATA4 ENSGALG00000010822 4 0.821 - - - - - - - 0.821 - - spermatogenesis associated 4 [Source:NCBI gene;Acc:422571]
17. PTPRQ ENSGALG00000010935 626 0.821 - - - - - - - 0.821 - - protein tyrosine phosphatase, receptor type Q [Source:HGNC Symbol;Acc:HGNC:9679]
18. GABRA5 ENSGALG00000016744 12 0.821 - - - - - - - 0.821 - - gamma-aminobutyric acid type A receptor alpha5 subunit [Source:HGNC Symbol;Acc:HGNC:4079]
19. ENSGALG00000023027 ENSGALG00000023027 5 0.821 - - - - - - - 0.821 - -
20. MUC13 7 0.821 - - - - - - - 0.821 - - mucin 13, cell surface associated, transcript variant X10
21. GTPBP6 ENSGALG00000016717 17 0.821 - - - - - - - 0.821 - - GTP binding protein 6 (putative) [Source:HGNC Symbol;Acc:HGNC:30189]
22. PTBP3 ENSGALG00000015669 16 0.821 - - - - - - - 0.821 - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
23. SUSD1 ENSGALG00000015677 12 0.821 - - - - - - - 0.821 - - sushi domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25413]
24. GPR17 ENSGALG00000037153 3 0.821 - - - - - - - 0.821 - - G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]
25. C1orf228 3 0.821 - - - - - - - 0.821 - - chromosome 1 open reading frame 228, transcript variant X5
26. SFT2D2 ENSGALG00000019228 10 0.821 - - - - - - - 0.821 - - SFT2 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25140]
27. GSAP ENSGALG00000008312 12 0.821 - - - - - - - 0.821 - - gamma-secretase activating protein [Source:HGNC Symbol;Acc:HGNC:28042]
28. ENSGALG00000026756 ENSGALG00000026756 134 0.821 - - - - - - - 0.821 - -
29. CDHR1 ENSGALG00000002314 24 0.821 - - - - - - - 0.821 - - cadherin related family member 1 [Source:NCBI gene;Acc:414847]
30. GP5 ENSGALG00000045125 3 0.821 - - - - - - - 0.821 - - glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]
31. CD101 12 0.821 - - - - - - - 0.821 - - CD101 molecule, transcript variant X4
32. ENSGALG00000023353 ENSGALG00000023353 1 0.821 - - - - - - - 0.821 - -
33. SLC30A8 ENSGALG00000034377 3 0.821 - - - - - - - 0.821 - - solute carrier family 30 member 8 [Source:HGNC Symbol;Acc:HGNC:20303]
34. HBP1 ENSGALG00000008050 19 0.821 - - - - - - - 0.821 - - HMG-box transcription factor 1 [Source:NCBI gene;Acc:417705]
35. ENSGALG00000028652 ENSGALG00000028652 65 0.821 - - - - - - - 0.821 - -
36. SOX10 ENSGALG00000012290 3942 0.821 - - - - - - - 0.821 - - SRY-box 10 [Source:NCBI gene;Acc:395573]
37. PTPRZ1_1 ENSGALG00000040114 30 0.819 - - - - - - - 0.819 - - protein tyrosine phosphatase, receptor type Z1 [Source:NCBI gene;Acc:396403]
38. MAP3K13 ENSGALG00000006655 632 0.818 - - - - - - - 0.818 - - mitogen-activated protein kinase kinase kinase 13 [Source:HGNC Symbol;Acc:HGNC:6852]
39. LOC416530 ENSGALG00000005291 207 0.818 - - - - - - - 0.818 - - uncharacterized LOC416530, transcript variant X1
40. ENSGALG00000023735 ENSGALG00000023735 12 0.818 - - - - - - - 0.818 - -
41. SRRL ENSGALG00000002638 26 0.813 - - - - - - - 0.813 - - serine racemase-like, transcript variant X8
42. NMRAL1 ENSGALG00000029820 29 0.813 - - - - - - - 0.813 - - NmrA like redox sensor 1 [Source:NCBI gene;Acc:416672]
43. PWWP2B ENSGALG00000010491 30 0.805 - - - - - - - 0.805 - - PWWP domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25150]
44. ZNF507 ENSGALG00000004532 78 0.803 - - - - - - - 0.803 - - zinc finger protein 507, transcript variant X2
45. CLEC18B ENSGALG00000027183 284 0.798 - - - - - - - 0.798 - - C-type lectin domain family 18 member B, transcript variant X2
46. CPEB4 ENSGALG00000033512 779 0.795 - - - - - - - 0.795 - - cytoplasmic polyadenylation element binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21747]
47. C15orf61 ENSGALG00000028141 56 0.792 - - - - - - - 0.792 - - chromosome 15 open reading frame 61 [Source:NCBI gene;Acc:101747767]
48. KHDRBS2 ENSGALG00000016276 110 0.789 - - - - - - - 0.789 - - KH RNA binding domain containing, signal transduction associated 2 [Source:HGNC Symbol;Acc:HGNC:18114]
49. FBXO11 ENSGALG00000008944 95 0.788 - - - - - - - 0.788 - - F-box protein 11 [Source:HGNC Symbol;Acc:HGNC:13590]
50. USH1C ENSGALG00000006192 63 0.786 - - - - - - - 0.786 - - USH1 protein network component harmonin [Source:HGNC Symbol;Acc:HGNC:12597]
51. CHGB ENSGALG00000046616 357 0.785 - - - - - - - 0.785 - - chromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]
52. BBS9 ENSGALG00000031650 13 0.785 - - - - - - - 0.785 - - Bardet-Biedl syndrome 9, transcript variant X5
53. ECSCR ENSGALG00000024379 313 0.782 - - - - - - - 0.782 - - endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
54. ZP1 ENSGALG00000031916 122 0.781 - - - - - - - 0.781 - - zona pellucida glycoprotein 1 [Source:NCBI gene;Acc:395418]
55. HECTD2 ENSGALG00000038043 177 0.781 - - - - - - - 0.781 - - HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]
56. URB2 ENSGALG00000011101 12 0.781 - - - - - - - 0.781 - - URB2 ribosome biogenesis 2 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:28967]
57. A1CF ENSGALG00000003765 36 0.775 - - - - - - - 0.775 - - APOBEC1 complementation factor [Source:HGNC Symbol;Acc:HGNC:24086]
58. ENSGALG00000020972 ENSGALG00000020972 54 0.773 - - - - - - - 0.773 - -
59. RAD54L2 ENSGALG00000003243 187 0.771 - - - - - - - 0.771 - - RAD54-like 2 (S. cerevisiae) [Source:NCBI gene;Acc:415933]
60. ASB7 ENSGALG00000007115 3 0.769 - - - - - 0.769 - - - - ankyrin repeat and SOCS box containing 7 [Source:NCBI gene;Acc:415518]
61. REEP1 ENSGALG00000015786 7 0.769 - - - - - 0.769 - - - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
62. CCBL2 CCBL2 184 0.769 - - - - - 0.769 - - - -
63. SERGEF ENSGALG00000006231 35 0.769 - - - - - 0.769 - - - - secretion regulating guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:17499]
64. BFIV21 BFIV21 30 0.767 - - - - - - - 0.767 - -
65. WNT4 ENSGALG00000041708 1277 0.767 - - - - - - - 0.767 - - Wnt family member 4 [Source:NCBI gene;Acc:395561]
66. SCN5A ENSGALG00000006112 137 0.76 - - - - - - - 0.760 - - Gallus gallus sodium voltage-gated channel alpha subunit 5 (SCN5A), mRNA. [Source:RefSeq mRNA;Acc:NM_001318446]
67. IQUB ENSGALG00000008823 65 0.759 - - - - - - - 0.759 - - IQ motif and ubiquitin domain containing [Source:HGNC Symbol;Acc:HGNC:21995]
68. IKZF1 ENSGALG00000013086 58 0.757 - - - - - - - 0.757 - - IKAROS family zinc finger 1 [Source:NCBI gene;Acc:395974]
69. JAKMIP2 ENSGALG00000007593 95 0.75 - - - - - - - 0.750 - - janus kinase and microtubule interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29067]
70. GYLTL1B GYLTL1B 3 0.746 - - - - - 0.746 - - - -
71. FMNL1 117 0.734 - - - - - - - 0.734 - - formin like 1
72. UPRT ENSGALG00000007793 321 0.724 - - - - - - - 0.724 - - uracil phosphoribosyltransferase homolog [Source:NCBI gene;Acc:422327]
73. gga-mir-2954 ENSGALG00000026107 462 0.714 - - - - - - - 0.714 - - gga-mir-2954 [Source:miRBase;Acc:MI0013634]
74. MLH3 ENSGALG00000010304 231 0.712 - - - - - - - 0.712 - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
75. FANCF ENSGALG00000003660 25 0.711 - - - - - - - 0.711 - - FA complementation group F [Source:HGNC Symbol;Acc:HGNC:3587]
76. PDZRN4 ENSGALG00000009530 832 0.71 - - - - - - - 0.710 - - PDZ domain containing ring finger 4 [Source:HGNC Symbol;Acc:HGNC:30552]
77. PIAS4 ENSGALG00000034413 2865 0.708 - - - - - - - 0.708 - - protein inhibitor of activated STAT 4 [Source:HGNC Symbol;Acc:HGNC:17002]
78. TBC1D8B ENSGALG00000009040 75 0.708 - - - - - - - 0.708 - - TBC1 domain family member 8B [Source:HGNC Symbol;Acc:HGNC:24715]
79. ADGB ENSGALG00000012317 28 0.707 - - - - - - - 0.707 - - androglobin [Source:HGNC Symbol;Acc:HGNC:21212]
80. DNM1 ENSGALG00000004852 292 0.703 - - - - - 0.703 - - - - dynamin 1 [Source:HGNC Symbol;Acc:HGNC:2972]
81. ELFN1 ENSGALG00000004209 114 0.701 - - - - - - - 0.701 - - extracellular leucine rich repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33154]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA