Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USP47

Gene Name Gene ID Reads Annotation
USP47 ENSGALG00000005569 4813 ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]











Genes with expression patterns similar to USP47

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP47 ENSGALG00000005569 4813 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 47 [Source:NCBI gene;Acc:423032]
2. TBPL1 ENSGALG00000013981 3710 2.26 - - 0.724 - - - 0.819 0.717 - - TATA-box binding protein like 1 [Source:NCBI gene;Acc:395517]
3. RHOT1 ENSGALG00000003397 5149 1.66 - - 0.789 - - - 0.871 - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
4. RHOGL ENSGALG00000005464, ENSGALG00000005475 5791 1.643 - - - - - - 0.885 0.758 - - rho-related GTP-binding protein RhoG-like [Source:NCBI gene;Acc:422207]
5. DECR1 ENSGALG00000036990 6360 1.593 - - 0.771 - - - 0.822 - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
6. DDX42 ENSGALG00000000581 8780 1.593 - - - - - - 0.876 0.717 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
7. CASP6 ENSGALG00000012186 6639 1.566 - - - - - - 0.840 0.726 - - caspase 6 [Source:NCBI gene;Acc:395477]
8. NNT ENSGALG00000014869 8496 1.565 - - - - - - 0.819 0.746 - - nicotinamide nucleotide transhydrogenase [Source:HGNC Symbol;Acc:HGNC:7863]
9. GNMT ENSGALG00000043290 3288 1.55 - - 0.731 - - - 0.819 - - - glycine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4415]
10. NIPSNAP3L ENSGALG00000027334 7514 1.539 - - 0.701 - - - 0.838 - - - nipsnap homolog 3-like
11. LRR1 ENSGALG00000012230 1062 1.512 - - 0.749 - - - 0.763 - - - leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]
12. ANAPC16 ENSGALG00000004410 18001 1.504 - - - - - - 0.753 0.751 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
13. ZNF830 ENSGALG00000013156 3896 1.471 - - - - - - 0.769 0.702 - - zinc finger protein 830
14. CNEP1R1 ENSGALG00000029793 6536 1.471 - - 0.727 - - - 0.744 - - - CTD nuclear envelope phosphatase 1 regulatory subunit 1 [Source:NCBI gene;Acc:415736]
15. TXNDC12 ENSGALG00000010569 13822 1.464 - - 0.750 - - - 0.714 - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
16. TSEN2 ENSGALG00000004981 1929 1.443 - - 0.710 - - - - 0.733 - - tRNA splicing endonuclease subunit 2 [Source:NCBI gene;Acc:415965]
17. WDR89 ENSGALG00000011827 1481 1.439 - - 0.715 - - - - 0.724 - - WD repeat domain 89 [Source:NCBI gene;Acc:423510]
18. PWP1 ENSGALG00000012631 10536 0.91 - - - - - - 0.910 - - - PWP1 homolog, endonuclein [Source:NCBI gene;Acc:418066]
19. PDP1 ENSGALG00000034876 2965 0.897 - - - - - - 0.897 - - - pyruvate dehyrogenase phosphatase catalytic subunit 1 [Source:NCBI gene;Acc:428372]
20. TRDMT1 ENSGALG00000008686 2663 0.882 - - - - - - 0.882 - - - tRNA aspartic acid methyltransferase 1 [Source:NCBI gene;Acc:420520]
21. TMEM129 ENSGALG00000015710 1519 0.879 - - - - - - 0.879 - - - transmembrane protein 129 [Source:NCBI gene;Acc:422900]
22. CROT ENSGALG00000008813 8052 0.879 - - - - - - 0.879 - - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
23. TMEM14A ENSGALG00000019894 5279 0.876 - - - - - - 0.876 - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
24. QSER1 ENSGALG00000012030 4490 0.873 - - - - - - 0.873 - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
25. ZC3H7A ENSGALG00000003143 7114 0.872 - - - - - - 0.872 - - - zinc finger CCCH-type containing 7A [Source:HGNC Symbol;Acc:HGNC:30959]
26. USP5 ENSGALG00000014525 21883 0.871 - - - - - - 0.871 - - - ubiquitin specific peptidase 5 [Source:HGNC Symbol;Acc:HGNC:12628]
27. BAG4 ENSGALG00000003254 5751 0.871 - - - - - - 0.871 - - - BCL2 associated athanogene 4 [Source:HGNC Symbol;Acc:HGNC:940]
28. SDF2 ENSGALG00000037709 12283 0.866 - - - - - - 0.866 - - - stromal cell derived factor 2 [Source:HGNC Symbol;Acc:HGNC:10675]
29. SMYD4 ENSGALG00000003031 2362 0.865 - - - - - - 0.865 - - - SET and MYND domain containing 4 [Source:NCBI gene;Acc:417562]
30. COX20 ENSGALG00000027440 5881 0.864 - - - - - - 0.864 - - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
31. ZNHIT6 ENSGALG00000008658 4383 0.861 - - - - - - 0.861 - - - zinc finger HIT-type containing 6 [Source:HGNC Symbol;Acc:HGNC:26089]
32. WDR12 ENSGALG00000008470 7654 0.859 - - - - - - 0.859 - - - WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]
33. COMMD5 ENSGALG00000008867 12173 0.856 - - - - - - 0.856 - - - COMM domain containing 5 [Source:NCBI gene;Acc:422376]
34. TERF1 ENSGALG00000037453 4497 0.856 - - - - - - 0.856 - - - telomeric repeat binding factor 1 [Source:NCBI gene;Acc:378896]
35. CCDC53 CCDC53 3732 0.853 - - - - - - 0.853 - - -
36. CALSYNTENIN-1 CALSYNTENIN-1 11195 0.851 - - - - - - 0.851 - - -
37. C9orf85 ENSGALG00000026001 4110 0.85 - - - - - - 0.850 - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
38. GLTPD1 GLTPD1 2968 0.849 - - - - - - 0.849 - - -
39. XPR1 ENSGALG00000003893 5642 0.849 - - - - - - 0.849 - - - xenotropic and polytropic retrovirus receptor 1 [Source:HGNC Symbol;Acc:HGNC:12827]
40. TMA16 ENSGALG00000009501 6651 0.848 - - - - - - 0.848 - - - translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638]
41. PITPNB ENSGALG00000005654 21578 0.848 - - - - - - 0.848 - - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
42. STX8 ENSGALG00000001238 7403 0.847 - - - - - - 0.847 - - - syntaxin 8 [Source:NCBI gene;Acc:417321]
43. OSBPL8 ENSGALG00000010246 4565 0.847 - - - - - - 0.847 - - - oxysterol binding protein like 8 [Source:HGNC Symbol;Acc:HGNC:16396]
44. ANXA11 ENSGALG00000043826 5189 0.846 - - - - - - 0.846 - - - annexin A11 [Source:NCBI gene;Acc:423637]
45. INPP5F ENSGALG00000009445 1911 0.846 - - 0.846 - - - - - - - inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:HGNC:17054]
46. MTRR ENSGALG00000039424 3197 0.846 - - - - - - - 0.846 - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
47. GPX8 ENSGALG00000026704 4497 0.843 - - - - - - 0.843 - - - glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
48. RAD17 ENSGALG00000015571 1374 0.843 - - - - - - 0.843 - - - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
49. PANK1 ENSGALG00000006431 2910 0.843 - - - - - - 0.843 - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
50. GNE ENSGALG00000015331 1577 0.842 - - - - - - 0.842 - - - glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase [Source:NCBI gene;Acc:427285]
51. PLEKHA5 ENSGALG00000013134 3656 0.841 - - - - - - 0.841 - - - pleckstrin homology domain containing A5 [Source:HGNC Symbol;Acc:HGNC:30036]
52. CCDC132 CCDC132 2632 0.839 - - - - - - 0.839 - - -
53. TSPAN13 ENSGALG00000027240 8999 0.839 - - - - - - 0.839 - - - tetraspanin 13 [Source:NCBI gene;Acc:420595]
54. CTGF ENSGALG00000037402 1557 0.838 - - - - - - 0.838 - - - connective tissue growth factor [Source:NCBI gene;Acc:374135]
55. MPPE1 ENSGALG00000013794 988 0.838 - - - - - - 0.838 - - - metallophosphoesterase 1 [Source:NCBI gene;Acc:421031]
56. QRICH1 ENSGALG00000006867 2031 0.837 - - - - - - 0.837 - - - glutamine rich 1 [Source:NCBI gene;Acc:100858758]
57. FBXO28 ENSGALG00000009331 2871 0.836 - - - - - - 0.836 - - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
58. C1GALT1 ENSGALG00000009752 7148 0.835 - - - - - - 0.835 - - - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
59. INTS6L ENSGALG00000006157 2303 0.835 - - - - - - 0.835 - - - integrator complex subunit 6 like, transcript variant X6
60. ETV5 ENSGALG00000005768 9679 0.835 - - - - - - 0.835 - - - ETS variant 5 [Source:NCBI gene;Acc:395749]
61. NUSAP1 ENSGALG00000008584 9955 0.834 - - - - - - 0.834 - - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
62. FOXK2 ENSGALG00000001577 6346 0.834 - - - - - - 0.834 - - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
63. SALL1 ENSGALG00000039238 3740 0.833 - - - - - - 0.833 - - - spalt like transcription factor 1 [Source:NCBI gene;Acc:395446]
64. SLAIN2 ENSGALG00000014115 1292 0.832 - - - - - - 0.832 - - - SLAIN motif family member 2 [Source:HGNC Symbol;Acc:HGNC:29282]
65. EPB41L1 ENSGALG00000034171 3616 0.831 - - - - - - 0.831 - - - erythrocyte membrane protein band 4.1 like 1 [Source:HGNC Symbol;Acc:HGNC:3378]
66. TIRAP ENSGALG00000040224 2578 0.83 - - - - - - 0.830 - - - TIR domain containing adaptor protein [Source:NCBI gene;Acc:419715]
67. ABHD13 ENSGALG00000016853 4975 0.83 - - - - - - 0.830 - - - abhydrolase domain containing 13 [Source:NCBI gene;Acc:418763]
68. TRABD ENSGALG00000030705 6577 0.83 - - - - - - 0.830 - - - TraB domain containing [Source:NCBI gene;Acc:417746]
69. NEK7 ENSGALG00000002216 4532 0.828 - - - - - - 0.828 - - - NIMA related kinase 7 [Source:NCBI gene;Acc:424350]
70. CINP ENSGALG00000011372 2366 0.827 - - - - - - 0.827 - - - cyclin dependent kinase 2 interacting protein [Source:NCBI gene;Acc:423467]
71. ENSGALG00000000514 ENSGALG00000000514 9906 0.826 - - - - - - 0.826 - - -
72. CDC16 ENSGALG00000016816 2162 0.825 - - - - - - 0.825 - - - cell division cycle 16 [Source:NCBI gene;Acc:418735]
73. NDUFS8 ENSGALG00000040173 24745 0.824 - - - - - - 0.824 - - - NADH:ubiquinone oxidoreductase core subunit S8 [Source:HGNC Symbol;Acc:HGNC:7715]
74. EML1 1941 0.824 - - - - - - 0.824 - - - echinoderm microtubule associated protein like 1, transcript variant X11
75. ZCCHC8 ENSGALG00000004486 3201 0.823 - - - - - - 0.823 - - - zinc finger CCHC-type containing 8 [Source:NCBI gene;Acc:416862]
76. ZBTB26 ENSGALG00000042762 1920 0.823 - - - - - - 0.823 - - - zinc finger and BTB domain containing 26 [Source:NCBI gene;Acc:417107]
77. MLLT10 ENSGALG00000007928 4022 0.823 - - - - - - 0.823 - - - MLLT10, histone lysine methyltransferase DOT1L cofactor [Source:HGNC Symbol;Acc:HGNC:16063]
78. WDR51B WDR51B 5757 0.822 - - 0.822 - - - - - - -
79. ZC3H14 ENSGALG00000010622 7024 0.822 - - - - - - 0.822 - - - zinc finger CCCH-type containing 14 [Source:NCBI gene;Acc:423399]
80. ITFG1 ENSGALG00000004049 2934 0.822 - - - - - - 0.822 - - - integrin alpha FG-GAP repeat containing 1 [Source:NCBI gene;Acc:415742]
81. C12orf66 ENSGALG00000027682 2110 0.821 - - - - - - 0.821 - - - chromosome 12 open reading frame 66 [Source:HGNC Symbol;Acc:HGNC:26517]
82. RDM1 ENSGALG00000000243 3388 0.821 - - - - - - 0.821 - - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
83. LYRM4 ENSGALG00000027339 2917 0.821 - - - - - - 0.821 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
84. CLN6 ENSGALG00000007981 5656 0.82 - - - - - - 0.820 - - - CLN6, transmembrane ER protein [Source:NCBI gene;Acc:415558]
85. MRPS35 ENSGALG00000036730 6327 0.819 - - - - - - 0.819 - - - mitochondrial ribosomal protein S35 [Source:NCBI gene;Acc:419048]
86. RNF113A ENSGALG00000000538 3985 0.819 - - - - - - 0.819 - - - ring finger protein 113A [Source:NCBI gene;Acc:419956]
87. BUD13_1 ENSGALG00000025882 1118 0.819 - - - - - - 0.819 - - - BUD13 homolog [Source:NCBI gene;Acc:428248]
88. DHX33 ENSGALG00000001630 7783 0.818 - - - - - - 0.818 - - - DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]
89. NAPEPLD ENSGALG00000008285 1295 0.817 - - - - - - 0.817 - - - N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:417719]
90. PFKP ENSGALG00000006939 10149 0.817 - - - - - - 0.817 - - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
91. FAM53A ENSGALG00000015713 3795 0.816 - - - - - - 0.816 - - - family with sequence similarity 53 member A [Source:NCBI gene;Acc:378905]
92. ATXN7 ENSGALG00000007302 2596 0.816 - - - - - - 0.816 - - - ataxin 7, transcript variant X3
93. COG4 ENSGALG00000002603 4485 0.816 - - - - - - 0.816 - - - component of oligomeric golgi complex 4 [Source:NCBI gene;Acc:415681]
94. ASAP2 ENSGALG00000016419 1393 0.816 - - - - - - 0.816 - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
95. ARL5A ENSGALG00000041099 4592 0.815 - - - - - - 0.815 - - - ADP ribosylation factor like GTPase 5A [Source:HGNC Symbol;Acc:HGNC:696]
96. C7orf50 ENSGALG00000004055 5786 0.815 - - - - - - 0.815 - - - chromosome 7 open reading frame 50 [Source:HGNC Symbol;Acc:HGNC:22421]
97. PIN4 ENSGALG00000003878 23523 0.815 - - - - - - 0.815 - - - peptidylprolyl cis/trans isomerase, NIMA-interacting 4 [Source:HGNC Symbol;Acc:HGNC:8992]
98. TTI1 ENSGALG00000006791 1218 0.814 - - - - - - 0.814 - - - TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
99. FAM49B ENSGALG00000036490 7984 0.813 - - - - - - 0.813 - - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
100. GADD45 GADD45 8780 0.812 - - - - - - 0.812 - - -

There are 433 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA