Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP38

Gene Name Gene ID Reads Annotation
USP38 ENSGALG00000009886 89 ubiquitin specific peptidase 38 [Source:HGNC Symbol;Acc:HGNC:20067]











Genes with expression patterns similar to USP38

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP38 ENSGALG00000009886 89 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ubiquitin specific peptidase 38 [Source:HGNC Symbol;Acc:HGNC:20067]
2. SLC39A8 ENSGALG00000012298 9 0.839 - - - - - - - 0.839 - - solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]
3. SNX21 ENSGALG00000006836 5 0.839 - - - - - - - 0.839 - - sorting nexin family member 21 [Source:HGNC Symbol;Acc:HGNC:16154]
4. GPR139 ENSGALG00000027146 39 0.839 - - - - - - - 0.839 - - Gallus gallus G protein-coupled receptor 139 (GPR139), mRNA. [Source:RefSeq mRNA;Acc:NM_001321735]
5. EFCAB12 EFCAB12 15 0.836 - - - - - - - 0.836 - -
6. ENSGALG00000013992 ENSGALG00000013992 6 0.831 - - - - - - - 0.831 - -
7. SERPINB14 SERPINB14 196 0.829 - - - - - - - - - 0.829
8. PLEKHO2 ENSGALG00000007248 76 0.824 - - - - - - - 0.824 - - pleckstrin homology domain containing O2, transcript variant X2
9. PIK3C2G ENSGALG00000013117 53 0.817 - - - - - - - - - 0.817 phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]
10. LMOD2 ENSGALG00000008805 113 0.808 - - - - - - - - - 0.808 leiomodin 2 [Source:NCBI gene;Acc:417751]
11. DAPK1 ENSGALG00000012608 17 0.802 - - - - - - 0.802 - - - death-associated protein kinase 1 [Source:NCBI gene;Acc:431670]
12. C3orf17 C3orf17 3 0.797 - - - 0.797 - - - - - -
13. CELSR3 ENSGALG00000036763 4 0.797 - - - 0.797 - - - - - - cadherin EGF LAG seven-pass G-type receptor 3 [Source:HGNC Symbol;Acc:HGNC:3230]
14. FES ENSGALG00000008340 223 0.797 - - - 0.797 - - - - - - FES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]
15. TMEM71 ENSGALG00000044996 4 0.797 - - - 0.797 - - - - - - transmembrane protein 71 [Source:HGNC Symbol;Acc:HGNC:26572]
16. GPR87 ENSGALG00000010377 3 0.797 - - - 0.797 - - - - - - G protein-coupled receptor 87 [Source:HGNC Symbol;Acc:HGNC:4538]
17. TTBK1 ENSGALG00000008627 8 0.797 - - - 0.797 - - - - - - tau tubulin kinase 1 [Source:NCBI gene;Acc:416713]
18. DNAH9 ENSGALG00000001111 28 0.797 - - - 0.797 - - - - - - dynein axonemal heavy chain 9
19. SPATA2L ENSGALG00000044991 463 0.796 - - - - - - 0.796 - - - spermatogenesis associated 2 like [Source:HGNC Symbol;Acc:HGNC:28393]
20. FHOD3 ENSGALG00000013124 195 0.791 - - - - - - - 0.791 - - formin homology 2 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26178]
21. PDPR ENSGALG00000002690 45 0.791 - - 0.791 - - - - - - - pyruvate dehydrogenase phosphatase regulatory subunit [Source:HGNC Symbol;Acc:HGNC:30264]
22. gga-mir-125b gga-mir-125b 146 0.79 - - - 0.790 - - - - - -
23. APBB1IP ENSGALG00000007579 30 0.789 - - - - - - - - - 0.789 amyloid beta precursor protein binding family B member 1 interacting protein [Source:NCBI gene;Acc:420492]
24. CCDC3 ENSGALG00000030140 258 0.781 - - - - - - - - - 0.781 coiled-coil domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23813]
25. SIM1 ENSGALG00000015466 111 0.762 - - - - - - - - - 0.762 SIM bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:10882]
26. VEGFRKDRL ENSGALG00000007646 18 0.758 - - - 0.758 - - - - - - vascular endothelial growth factor receptor kdr-like, transcript variant X2
27. SLC35A3 12 0.757 - - - 0.757 - - - - - - solute carrier family 35 member A3, transcript variant X7
28. SPIRE1 ENSGALG00000013817 155 0.756 - - - - - - 0.756 - - - spire type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]
29. KCND2 ENSGALG00000009066, ENSGALG00000043515 63 0.745 - - - - - - - 0.745 - - potassium voltage-gated channel subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:6238]
30. E2F3 ENSGALG00000012680 21 0.743 - - - - - - - - - 0.743 E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]
31. NIM1 NIM1 18 0.742 - - - 0.742 - - - - - -
32. ARV1 ENSGALG00000011155 38 0.742 - - - 0.742 - - - - - - ARV1 homolog, fatty acid homeostasis modulator [Source:HGNC Symbol;Acc:HGNC:29561]
33. CAT-1 CAT-1 115 0.742 - - - 0.742 - - - - - -
34. ENSGALG00000021472 ENSGALG00000021472 2 0.74 - - - - - - 0.740 - - -
35. KCNJ5 ENSGALG00000001181 11 0.74 - - - - - - 0.740 - - - potassium voltage-gated channel subfamily J member 5 [Source:HGNC Symbol;Acc:HGNC:6266]
36. TRAF1 ENSGALG00000001583 3 0.74 - - - - - - 0.740 - - - TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]
37. DSEL ENSGALG00000042505 92 0.74 - - - - - - 0.740 - - - dermatan sulfate epimerase like [Source:HGNC Symbol;Acc:HGNC:18144]
38. F3 ENSGALG00000005619 110 0.74 - - - - - - 0.740 - - - coagulation factor III, tissue factor
39. COQ2 ENSGALG00000041294 25 0.74 - - - - - - 0.740 - - - coenzyme Q2, polyprenyltransferase [Source:HGNC Symbol;Acc:HGNC:25223]
40. WASF2 ENSGALG00000014012 30 0.74 - - - - - - 0.740 - - - WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
41. SIK3 ENSGALG00000007144 18 0.74 - - - - - - 0.740 - - - SIK family kinase 3 [Source:HGNC Symbol;Acc:HGNC:29165]
42. TMEM56 ENSGALG00000005580 10 0.74 - - - - - - 0.740 - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
43. C1orf74 ENSGALG00000001378 39 0.74 - - - - - - 0.740 - - - chromosome 1 open reading frame 74 [Source:HGNC Symbol;Acc:HGNC:26319]
44. SNTB2 ENSGALG00000027482 44 0.74 - - - - - - 0.740 - - - syntrophin beta 2 [Source:HGNC Symbol;Acc:HGNC:11169]
45. COL23A1 ENSGALG00000006708 181 0.739 - - - - - - - - - 0.739 collagen type XXIII alpha 1 chain, transcript variant X1
46. ALDH8A1 ENSGALG00000013969 8 0.737 - - 0.737 - - - - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
47. NBL1 ENSGALG00000040297 8165 0.737 - - - - - - - - - 0.737 neuroblastoma 1, DAN family BMP antagonist [Source:NCBI gene;Acc:373952]
48. GOS2 GOS2 116 0.731 - - - - - - 0.731 - - -
49. SYDE2 ENSGALG00000038776 192 0.731 - - - - - - - - - 0.731 synapse defective Rho GTPase homolog 2 [Source:HGNC Symbol;Acc:HGNC:25841]
50. PEAK1 ENSGALG00000002759 39 0.723 - - - - - - - - - 0.723 pseudopodium enriched atypical kinase 1 [Source:NCBI gene;Acc:100857260]
51. CCDC39 ENSGALG00000021855 23 0.72 - - - - - - - - - 0.720 coiled-coil domain containing 39
52. CCDC147 CCDC147 53 0.719 - - - - - - - - - 0.719
53. TSPO ENSGALG00000014166 60 0.718 - - - - - - - - - 0.718 translocator protein [Source:NCBI gene;Acc:418226]
54. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 0.717 - - - 0.717 - - - - - - MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
55. HYAL2 ENSGALG00000002138 237 0.716 - - - - - - - - - 0.716 hyaluronoglucosaminidase 2 [Source:HGNC Symbol;Acc:HGNC:5321]
56. GABARAPL3 GABARAPL3 32 0.715 - - - 0.715 - - - - - -
57. SNORA17 SNORA17 39 0.714 - - - - - - - - - 0.714
58. STAMBP ENSGALG00000042555 1362 0.713 - - - - - - - - - 0.713 STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
59. ATCAY ENSGALG00000001812 1454 0.711 - - 0.711 - - - - - - - ATCAY, caytaxin [Source:HGNC Symbol;Acc:HGNC:779]
60. FNDC4 ENSGALG00000016507 55 0.711 - - - - - - 0.711 - - - Gallus gallus fibronectin type III domain containing 4 (FNDC4), mRNA. [Source:RefSeq mRNA;Acc:NM_001318412]
61. PUS7 ENSGALG00000008132 531 0.711 - - - - - - - 0.711 - - pseudouridylate synthase 7 [Source:NCBI gene;Acc:417709]
62. CCDC178 6 0.71 - - - 0.710 - - - - - - coiled-coil domain containing 178, transcript variant X3
63. IPPK ENSGALG00000004684 39 0.706 - - - - - - 0.706 - - - inositol-pentakisphosphate 2-kinase [Source:NCBI gene;Acc:415951]
64. LY75 ENSGALG00000011153 76 0.705 - - - - - - - - - 0.705 lymphocyte antigen 75 [Source:NCBI gene;Acc:424192]
65. TCTEX1D1 54 0.705 - - - 0.705 - - - - - - Tctex1 domain containing 1, transcript variant X2
66. PTK2B ENSGALG00000016564 406 0.704 - - - 0.704 - - - - - - protein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]
67. SLC6A1 ENSGALG00000004921 118 0.702 - - - - - - - - - 0.702 solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]
68. ILDR2 ENSGALG00000015458 16 0.7 - - - 0.700 - - - - - - immunoglobulin like domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:18131]
69. PITPNM2 ENSGALG00000003645 17 0.7 - - - 0.700 - - - - - - phosphatidylinositol transfer protein membrane associated 2 [Source:HGNC Symbol;Acc:HGNC:21044]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA