Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USP38

Gene Name Gene ID Reads Annotation
USP38 ENSDARG00000075798 285 ubiquitin specific peptidase 38 [Source:ZFIN;Acc:ZDB-GENE-101007-2]










Genes with expression patterns similar to USP38

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP38 ENSDARG00000075798 285 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 38 [Source:ZFIN;Acc:ZDB-GENE-101007-2]
2. galnt8b galnt8b 77 1.612 0.759 - - - - - 0.853 - -
3. trim45 ENSDARG00000076781 578 1.567 - 0.728 - 0.839 - - - - - tripartite motif containing 45 [Source:ZFIN;Acc:ZDB-GENE-070912-389]
4. ptdss1 ptdss1 1143 1.554 0.734 - - - - - 0.820 - -
5. cyp27a1.4 ENSDARG00000055159 47 1.524 - - - - - 0.761 0.763 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
6. smtla ENSDARG00000038191 42 1.48 0.759 - - - - - 0.721 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
7. APH1A APH1A 129 1.476 0.744 - - - - 0.732 - - -
8. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.459 0.738 0.721 - - - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
9. harbi1 ENSDARG00000036038 517 1.457 - - - - 0.741 0.716 - - - harbinger transposase derived 1 [Source:ZFIN;Acc:ZDB-GENE-040608-1]
10. HIST1H4J HIST1H4J 31 1.44 0.738 - - - - - 0.702 - -
11. OSBPL3 OSBPL3 145 1.438 - 0.726 - - - - 0.712 - -
12. raver2 ENSDARG00000075034 290 1.435 - - - - - 0.726 0.709 - - ribonucleoprotein, PTB-binding 2 [Source:ZFIN;Acc:ZDB-GENE-090713-1]
13. kat2b ENSDARG00000062634 276 1.433 - 0.718 - - - - 0.715 - - K(lysine) acetyltransferase 2B [Source:ZFIN;Acc:ZDB-GENE-060503-207]
14. fam222a ENSDARG00000090797 566 1.423 - 0.720 - - - - 0.703 - - family with sequence similarity 222, member A [Source:ZFIN;Acc:ZDB-GENE-050309-42]
15. CABZ01065679.1 ENSDARG00000098342 99 0.919 - - - 0.919 - - - - -
16. cilp2 ENSDARG00000013687 70 0.906 - - - - - 0.906 - - - cartilage intermediate layer protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-436]
17. dyrk1aa ENSDARG00000063570 14 0.897 0.897 - - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, a [Source:ZFIN;Acc:ZDB-GENE-050302-29]
18. si:ch73-382f3.1 ENSDARG00000093833 295 0.895 - - - 0.895 - - - - - si:ch73-382f3.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9513]
19. soul4 ENSDARG00000101008 147 0.894 0.894 - - - - - - - - heme-binding protein soul4 [Source:ZFIN;Acc:ZDB-GENE-110718-1]
20. tfb1m ENSDARG00000040727 142 0.893 - - - - - 0.893 - - - transcription factor B1, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-060929-1010]
21. UBXN11 ENSDARG00000053828 22 0.885 0.885 - - - - - - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
22. nhej1 ENSDARG00000058893 172 0.881 0.881 - - - - - - - - nonhomologous end-joining factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2515]
23. bhlhe41 ENSDARG00000041691, ENSDARG00000112123, ENSDARG00000114358 302 0.876 - - - - - - 0.876 - - basic helix-loop-helix family, member e41 [Source:ZFIN;Acc:ZDB-GENE-050419-146]
24. fbrs ENSDARG00000074688 621 0.872 - - - - - - 0.872 - - fibrosin [Source:ZFIN;Acc:ZDB-GENE-111207-1]
25. DHX36 ENSDARG00000101059 314 0.87 0.870 - - - - - - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
26. SLC46A3 ENSDARG00000077313 162 0.867 0.867 - - - - - - - - solute carrier family 46, member 3 [Source:ZFIN;Acc:ZDB-GENE-100105-2]
27. vps53 ENSDARG00000069324, ENSDARG00000116674 1130 0.858 - - - - - - 0.858 - - vacuolar protein sorting 53 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-199]
28. taf6 ENSDARG00000102998 722 0.858 - 0.858 - - - - - - - TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-040912-23]
29. TRAF3IP2 TRAF3IP2 153 0.856 0.856 - - - - - - - -
30. dohh ENSDARG00000003564, ENSDARG00000116423 1117 0.854 - - - - - - 0.854 - - deoxyhypusine hydroxylase/monooxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-451]
31. zgc:113385 zgc:113385 297 0.851 - - - - - - 0.851 - -
32. plekhm1 ENSDARG00000099954, ENSDARG00000114703 545 0.849 - - - - - - 0.849 - - pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2752]
33. vps54 ENSDARG00000102960 143 0.849 - - - - - 0.849 - - - vacuolar protein sorting 54 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081022-176]
34. st3gal2l st3gal2l 393 0.845 - - - - - - 0.845 - -
35. map3k8 ENSDARG00000061710 76 0.844 - - - - - 0.844 - - - mitogen-activated protein kinase kinase kinase 8 [Source:ZFIN;Acc:ZDB-GENE-100316-8]
36. lrp8 ENSDARG00000070074, ENSDARG00000116879 323 0.844 0.844 - - - - - - - - low density lipoprotein receptor-related protein 8, apolipoprotein e receptor [Source:ZFIN;Acc:ZDB-GENE-050506-134]
37. wu:fi42e03 ENSDARG00000070709 276 0.841 0.841 - - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
38. ZNF337_6 ZNF337_6 898 0.839 - - - - - - 0.839 - -
39. wu:fc75a09 ENSDARG00000111625 289 0.838 0.838 - - - - - - - - wu:fc75a09 [Source:ZFIN;Acc:ZDB-GENE-030131-4139]
40. ptbp2a ENSDARG00000101947 1921 0.837 - - - - - - 0.837 - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
41. myh7bb ENSDARG00000035322 287 0.837 - - - - - 0.837 - - - myosin, heavy chain 7B, cardiac muscle, beta b [Source:ZFIN;Acc:ZDB-GENE-090311-5]
42. lpcat1 ENSDARG00000011506 263 0.837 - - - - - - 0.837 - - lysophosphatidylcholine acyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-915]
43. arhgap4b ENSDARG00000015003 451 0.833 - - - - - - 0.833 - - Rho GTPase activating protein 4b [Source:ZFIN;Acc:ZDB-GENE-090311-38]
44. gtpbpl gtpbpl 337 0.829 - - - - - 0.829 - - -
45. si:dkey-234d14.2 ENSDARG00000092275 30 0.828 0.828 - - - - - - - - si:dkey-234d14.2 [Source:ZFIN;Acc:ZDB-GENE-100922-134]
46. kat7 kat7 642 0.826 - - - - - - 0.826 - -
47. pde6c ENSDARG00000100397 49 0.825 - 0.825 - - - - - - - phosphodiesterase 6C, cGMP-specific, cone, alpha prime [Source:ZFIN;Acc:ZDB-GENE-040426-1664]
48. foxn3 ENSDARG00000012833 169 0.825 - - - - - - 0.825 - - forkhead box N3 [Source:ZFIN;Acc:ZDB-GENE-060512-39]
49. TMEM150A TMEM150A 975 0.824 - - - 0.824 - - - - -
50. CR318595.2 CR318595.2 17 0.824 0.824 - - - - - - - -
51. hbl1 ENSDARG00000068221 116 0.824 0.824 - - - - - - - - hexose-binding lectin 1 [Source:ZFIN;Acc:ZDB-GENE-070912-285]
52. MAP7_1 MAP7_1 42 0.824 0.824 - - - - - - - -
53. tmem234 ENSDARG00000078333 488 0.824 0.824 - - - - - - - - transmembrane protein 234 [Source:ZFIN;Acc:ZDB-GENE-090313-326]
54. tasp1 ENSDARG00000060580 453 0.824 - - - 0.824 - - - - - taspase, threonine aspartase, 1 [Source:ZFIN;Acc:ZDB-GENE-070424-242]
55. ntpcr ENSDARG00000021853 104 0.823 - - - - - - 0.823 - - nucleoside-triphosphatase, cancer-related [Source:ZFIN;Acc:ZDB-GENE-040801-200]
56. TMEM186 ENSDARG00000074264, ENSDARG00000109974 245 0.823 - - - - - - 0.823 - - transmembrane protein 186 [Source:ZFIN;Acc:ZDB-GENE-081022-122]
57. si:dkey-263m6.1 si:dkey-263m6.1 140 0.821 - - - - 0.821 - - - -
58. lsg1 ENSDARG00000015352 812 0.821 - - - - - - 0.821 - - large 60S subunit nuclear export GTPase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2184]
59. atp9b ENSDARG00000062521 915 0.821 - - - - - - 0.821 - - ATPase phospholipid transporting 9B [Source:ZFIN;Acc:ZDB-GENE-060503-583]
60. rgs7 rgs7 208 0.82 - - - - - - 0.820 - -
61. si:dkey-70e17.2 si:dkey-70e17.2 371 0.82 - - - - - - 0.820 - -
62. SPOP ENSDARG00000100519 52 0.817 0.817 - - - - - - - - speckle-type POZ protein [Source:ZFIN;Acc:ZDB-GENE-040426-1378]
63. dscama ENSDARG00000024865 75 0.817 - - - - - - 0.817 - - Down syndrome cell adhesion molecule a [Source:ZFIN;Acc:ZDB-GENE-050310-7]
64. BX000999.4 BX000999.4 206 0.817 0.817 - - - - - - - -
65. RABEPK ENSDARG00000112165 112 0.816 - - - - - 0.816 - - - Rab9 effector protein with kelch motifs [Source:ZFIN;Acc:ZDB-GENE-040704-52]
66. sh3tc2 ENSDARG00000089917 415 0.815 0.815 - - - - - - - - SH3 domain and tetratricopeptide repeats 2 [Source:ZFIN;Acc:ZDB-GENE-081104-347]
67. magixb ENSDARG00000077633 74 0.815 - - - - - - 0.815 - - MAGI family member, X-linked b [Source:ZFIN;Acc:ZDB-GENE-081105-33]
68. rock1 ENSDARG00000058993 2603 0.814 - - - - - - 0.814 - - Rho-associated, coiled-coil containing protein kinase 1 [Source:ZFIN;Acc:ZDB-GENE-100712-2]
69. commd1 ENSDARG00000031203 340 0.814 0.814 - - - - - - - - copper metabolism (Murr1) domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060512-329]
70. THEM6_1 ENSDARG00000103914 469 0.813 - - - 0.813 - - - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
71. C12H10orf2 C12H10orf2 245 0.812 0.812 - - - - - - - -
72. ANKRD6 ANKRD6 73 0.811 - - - - 0.811 - - - -
73. cdc45 ENSDARG00000043720 353 0.811 - - - - - - 0.811 - - CDC45 cell division cycle 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2710]
74. mms19 ENSDARG00000079067 65 0.81 - - - - - 0.810 - - - MMS19 homolog, cytosolic iron-sulfur assembly component [Source:ZFIN;Acc:ZDB-GENE-120316-2]
75. BAIAP2 BAIAP2 88 0.81 - - - - - 0.810 - - -
76. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 0.81 - - - - - - 0.810 - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
77. grk1a ENSDARG00000058803 13 0.81 - - - - - 0.810 - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
78. usp42 ENSDARG00000077300 926 0.809 - - - - - - 0.809 - - ubiquitin specific peptidase 42 [Source:ZFIN;Acc:ZDB-GENE-030131-5739]
79. DBNDD1 DBNDD1 43 0.808 - - - - - 0.808 - - -
80. ticrr ENSDARG00000045605 739 0.807 - 0.807 - - - - - - - TopBP1-interacting, checkpoint, and replication regulator [Source:ZFIN;Acc:ZDB-GENE-040728-1]
81. ANKRD13D ENSDARG00000098140 88 0.807 - - - - 0.807 - - - - ankyrin repeat domain 13 family, member D [Source:ZFIN;Acc:ZDB-GENE-101007-3]
82. RFWD3 ENSDARG00000087752 167 0.806 - - - - - 0.806 - - - ring finger and WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-120529-1]
83. trio trio 519 0.806 - - - - 0.806 - - - -
84. si:ch211-232m8.3 ENSDARG00000095092 161 0.805 0.805 - - - - - - - - si:ch211-232m8.3 [Source:ZFIN;Acc:ZDB-GENE-081107-22]
85. HAUS8 HAUS8 625 0.805 - - - - - - 0.805 - -
86. CR848032.1 ENSDARG00000102710 338 0.805 - - - - - - 0.805 - -
87. fbp1a ENSDARG00000021366 1778 0.804 - - - 0.804 - - - - - fructose-1,6-bisphosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7171]
88. TMEM97 ENSDARG00000040553 530 0.804 - - - - - - 0.804 - - transmembrane protein 97 [Source:ZFIN;Acc:ZDB-GENE-110627-1]
89. hlfb ENSDARG00000061011 48 0.802 0.802 - - - - - - - - hepatic leukemia factor b [Source:ZFIN;Acc:ZDB-GENE-110420-3]
90. athl1 athl1 172 0.802 - - - - - - 0.802 - -
91. cacnb2a ENSDARG00000099045 374 0.801 - - - - 0.801 - - - - calcium channel, voltage-dependent, beta 2a [Source:ZFIN;Acc:ZDB-GENE-080808-7]
92. ATAD2 ENSDARG00000076590 411 0.801 - 0.801 - - - - - - - ATPase family, AAA domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7003]
93. ela2l ENSDARG00000056765, ENSDARG00000114256 31 0.801 - - - - 0.801 - - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
94. CU694372.1 ENSDARG00000097988 105 0.801 - - - - 0.801 - - - -
95. rab9a ENSDARG00000045027 201 0.8 0.800 - - - - - - - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
96. cnot10 ENSDARG00000058528 478 0.8 - - - - - - 0.800 - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
97. cntn1b ENSDARG00000045685 159 0.799 - - - - - - 0.799 - - contactin 1b [Source:ZFIN;Acc:ZDB-GENE-041210-236]
98. map4k2l map4k2l 248 0.798 0.798 - - - - - - - -
99. CEP192 CEP192 978 0.798 - 0.798 - - - - - - -
100. si:dkey-163m14.2 274 0.798 - - - - 0.798 - - - - si:dkey-163m14.2

There are 556 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA