Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP34

Gene Name Gene ID Reads Annotation
USP34 ENSGALG00000004455 6667 ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]











Genes with expression patterns similar to USP34

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP34 ENSGALG00000004455 6667 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 34 [Source:NCBI gene;Acc:421193]
2. LARS ENSGALG00000007494 13966 1.736 - - - - - - 0.978 0.758 - - leucyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:6512]
3. HOXB3 ENSGALG00000043219 5198 0.999 - - - - - - 0.999 - - - homeobox B3 [Source:NCBI gene;Acc:395502]
4. CASC4 ENSGALG00000008208 8338 0.999 - - - - - - 0.999 - - - cancer susceptibility 4 [Source:NCBI gene;Acc:415575]
5. CCDC47 ENSGALG00000000564 6584 0.999 - - - - - - 0.999 - - - coiled-coil domain containing 47 [Source:HGNC Symbol;Acc:HGNC:24856]
6. WDR33 ENSGALG00000002043 6340 0.999 - - - - - - 0.999 - - - WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
7. POGZ ENSGALG00000036365 4056 0.999 - - - - - - 0.999 - - - pogo transposable element with ZNF domain, transcript variant X2
8. SH2D3C ENSGALG00000005036 5101 0.999 - - - - - - 0.999 - - - SH2 domain containing 3C [Source:HGNC Symbol;Acc:HGNC:16884]
9. RARRES2 ENSGALG00000042642 3043 0.999 - - - - - - 0.999 - - - retinoic acid receptor responder (tazarotene induced) 2 [Source:NCBI gene;Acc:420366]
10. ZCCHC17 ENSGALG00000000618 5163 0.999 - - - - - - 0.999 - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
11. TRIM37 ENSGALG00000005084 4036 0.999 - - - - - - 0.999 - - - tripartite motif containing 37 [Source:NCBI gene;Acc:417628]
12. FAM206A ENSGALG00000019524 7170 0.999 - - - - - - 0.999 - - - family with sequence similarity 206 member A [Source:NCBI gene;Acc:420983]
13. VPS41 ENSGALG00000031635 4391 0.999 - - - - - - 0.999 - - - VPS41, HOPS complex subunit [Source:NCBI gene;Acc:420762]
14. C-MET C-MET 1650 0.999 - - - - - - 0.999 - - -
15. TLE4 TLE4 7278 0.998 - - - - - - 0.998 - - -
16. SLC9A3R2 ENSGALG00000005608 4220 0.998 - - - - - - 0.998 - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
17. GAS41 GAS41 9941 0.998 - - - - - - 0.998 - - -
18. PPP1CB ENSGALG00000010026 6909 0.998 - - - - - - 0.998 - - - protein phosphatase 1 catalytic subunit beta [Source:NCBI gene;Acc:396019]
19. EIF5B ENSGALG00000016764 30681 0.998 - - - - - - 0.998 - - - eukaryotic translation initiation factor 5B [Source:NCBI gene;Acc:395514]
20. FAAH ENSGALG00000010433 3309 0.998 - - - - - - 0.998 - - - fatty acid amide hydrolase [Source:HGNC Symbol;Acc:HGNC:3553]
21. GTF2I ENSGALG00000021665 6812 0.998 - - - - - - 0.998 - - - general transcription factor IIi [Source:HGNC Symbol;Acc:HGNC:4659]
22. SF3A1 ENSGALG00000007937 11716 0.998 - - - - - - 0.998 - - - splicing factor 3a subunit 1 [Source:NCBI gene;Acc:427717]
23. STT3B ENSGALG00000011465 11939 0.998 - - - - - - 0.998 - - - STT3B, catalytic subunit of the oligosaccharyltransferase complex [Source:NCBI gene;Acc:428444]
24. SAMM50 ENSGALG00000014194 20437 0.998 - - - - - - 0.998 - - - SAMM50 sorting and assembly machinery component [Source:NCBI gene;Acc:418234]
25. SSR1 ENSGALG00000012798 62626 0.997 - - - - - - 0.997 - - - signal sequence receptor subunit 1 [Source:NCBI gene;Acc:420871]
26. TMEM9B ENSGALG00000005908 14074 0.997 - - - - - - 0.997 - - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
27. PCNA ENSGALG00000029292 19163 0.997 - - - - - - 0.997 - - - proliferating cell nuclear antigen [Source:NCBI gene;Acc:373984]
28. FKBP9 ENSGALG00000037669 12079 0.995 - - - - - - 0.995 - - - FK506 binding protein 9 [Source:NCBI gene;Acc:395652]
29. NSF ENSGALG00000001055 7399 0.994 - - - - - - 0.994 - - - N-ethylmaleimide sensitive factor, vesicle fusing ATPase [Source:NCBI gene;Acc:419972]
30. BTG1 ENSGALG00000011276 17496 0.994 - - - - - - 0.994 - - - BTG anti-proliferation factor 1 [Source:NCBI gene;Acc:396295]
31. BID ENSGALG00000013039 12427 0.993 - - - - - - 0.993 - - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
32. MTF2 ENSGALG00000043087 15225 0.993 - - - - - - 0.993 - - - metal response element binding transcription factor 2 [Source:NCBI gene;Acc:395174]
33. PPP1R8 ENSGALG00000000729 11797 0.991 - - - - - - 0.991 - - - protein phosphatase 1 regulatory subunit 8 [Source:NCBI gene;Acc:419564]
34. NAA15 ENSGALG00000009782 18563 0.99 - - - - - - 0.990 - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:30782]
35. GFPT1 ENSGALG00000036391 14025 0.988 - - - - - - 0.988 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
36. OLFML3 ENSGALG00000001956 28633 0.987 - - - - - - 0.987 - - - olfactomedin like 3 [Source:NCBI gene;Acc:419882]
37. FANCC ENSGALG00000012618 7002 0.985 - - - - - - 0.985 - - - FA complementation group C [Source:NCBI gene;Acc:427468]
38. STK3 ENSGALG00000032850 6339 0.984 - - - - - - 0.984 - - - serine/threonine kinase 3 [Source:NCBI gene;Acc:425375]
39. LPHN2 LPHN2 16507 0.978 - - - - - - 0.978 - - -
40. NOL9 ENSGALG00000028958 23978 0.972 - - - - - - 0.972 - - - nucleolar protein 9 [Source:HGNC Symbol;Acc:HGNC:26265]
41. SRSF7 ENSGALG00000033120 43444 0.961 - - - - - - 0.961 - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
42. PKM ENSGALG00000001992 93960 0.933 - - - - - - 0.933 - - - pyruvate kinase M1/2 [Source:NCBI gene;Acc:396456]
43. SYNCRIP ENSGALG00000015830 30555 0.924 - - - - - - 0.924 - - - synaptotagmin binding cytoplasmic RNA interacting protein [Source:NCBI gene;Acc:421831]
44. ACTG1 ENSGALG00000001381 63905 0.919 - - - - - - 0.919 - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
45. GNB2L1 ENSGALG00000000122 194871 0.891 - - - - - - 0.891 - - - receptor for activated C kinase 1 [Source:NCBI gene;Acc:417044]
46. SFSWAP ENSGALG00000002487 9977 0.88 - - - - - - 0.880 - - - splicing factor SWAP [Source:HGNC Symbol;Acc:HGNC:10790]
47. NDUFS4 ENSGALG00000028026 25876 0.871 - - - - - - 0.871 - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
48. EEF1D 153795 0.853 - - - - - - 0.853 - - - eukaryotic translation elongation factor 1 delta, transcript variant X13
49. PLEKHH2 ENSGALG00000009947 6384 0.833 - - - - - - - 0.833 - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
50. GPD1L ENSGALG00000011481 4224 0.833 - - - - - - - 0.833 - - glycerol-3-phosphate dehydrogenase 1 like [Source:HGNC Symbol;Acc:HGNC:28956]
51. LEPROT ENSGALG00000011047 7132 0.82 - - - - - - - 0.820 - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
52. RPS8 ENSGALG00000010124 363516 0.813 - - - - - - 0.813 - - - ribosomal protein S8 [Source:NCBI gene;Acc:424584]
53. ZSWIM7 ENSGALG00000023686 6459 0.812 - - - - - - - 0.812 - - zinc finger SWIM-type containing 7 [Source:NCBI gene;Acc:417596]
54. TSPAN12 ENSGALG00000009029 2145 0.799 - - - - - - - 0.799 - - tetraspanin 12 [Source:NCBI gene;Acc:417763]
55. RPN1 ENSGALG00000005907 25315 0.798 - - - - - - - 0.798 - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
56. TOR1AIP1 ENSGALG00000029238 5843 0.792 - - - - - - - 0.792 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
57. AP2M1 ENSGALG00000008432 16249 0.79 - - - - - - - 0.790 - - adaptor related protein complex 2 mu 1 subunit [Source:NCBI gene;Acc:770246]
58. TRAPPC3 ENSGALG00000002284 23302 0.79 - - - - - - - 0.790 - - trafficking protein particle complex 3 [Source:NCBI gene;Acc:419625]
59. ASB3 ENSGALG00000008176 5422 0.782 - - - - - - - 0.782 - - ankyrin repeat and SOCS box containing 3 [Source:NCBI gene;Acc:428545]
60. ATP5A1 ATP5A1 32367 0.78 - - - - - - - 0.780 - -
61. COL4A1 ENSGALG00000036798 12749 0.78 - - - - - - - 0.780 - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
62. CAP1 ENSGALG00000036294 18598 0.779 - - - - - - - 0.779 - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
63. GPALPP1 ENSGALG00000031567 4221 0.771 - - - - - - - 0.771 - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
64. SEC63 ENSGALG00000015308 11596 0.771 - - - - - - - 0.771 - - SEC63 homolog, protein translocation regulator [Source:HGNC Symbol;Acc:HGNC:21082]
65. RAB12 ENSGALG00000033608 14160 0.77 - - - - - - - 0.770 - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
66. LIFR ENSGALG00000003733 4391 0.767 - - - - - - - 0.767 - - leukemia inhibitory factor receptor alpha [Source:NCBI gene;Acc:395262]
67. COL5A2 ENSGALG00000031112 18358 0.764 - - - - - - - 0.764 - - collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210]
68. RER1 ENSGALG00000021683 9074 0.756 - - - - - - - 0.756 - - retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
69. SIRT1 ENSGALG00000002761 9028 0.755 - - - - - - - 0.755 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
70. PLOD1 ENSGALG00000004531 8256 0.751 - - - - - - - 0.751 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:NCBI gene;Acc:419485]
71. NPNT ENSGALG00000043555 3002 0.746 - - - - - - - 0.746 - - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
72. ADAMTS19 ENSGALG00000000151 3217 0.745 - - - - - - - 0.745 - - ADAM metallopeptidase with thrombospondin type 1 motif 19 [Source:HGNC Symbol;Acc:HGNC:17111]
73. UBE2H ENSGALG00000031975 12964 0.742 - - - - - - - 0.742 - - ubiquitin conjugating enzyme E2 H [Source:NCBI gene;Acc:416678]
74. NBEA 1982 0.74 - - - - - - - 0.740 - - neurobeachin, transcript variant X10
75. ARHGAP29 ENSGALG00000005683 3622 0.739 - - - - - - - 0.739 - - Rho GTPase activating protein 29 [Source:NCBI gene;Acc:424488]
76. EIF5A2 ENSGALG00000009309 143671 0.737 - - - - - - 0.737 - - - eukaryotic translation initiation factor 5A [Source:NCBI gene;Acc:396545]
77. PARN ENSGALG00000003091 6363 0.73 - - - - - - - 0.730 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
78. ENSGALG00000027927 ENSGALG00000027927 654 0.73 - - 0.730 - - - - - - -
79. MMP2 ENSGALG00000003580 13120 0.729 - - - - - - - 0.729 - - matrix metallopeptidase 2 [Source:NCBI gene;Acc:386583]
80. SRF ENSGALG00000032029 6983 0.728 - - - - - - - 0.728 - - serum response factor [Source:NCBI gene;Acc:396103]
81. SLC39A9 ENSGALG00000009438 4838 0.727 - - - - - - - 0.727 - - solute carrier family 39 member 9 [Source:NCBI gene;Acc:423261]
82. CKLF ENSGALG00000005254 3365 0.727 - - - - - - - 0.727 - - chemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]
83. CRTAP ENSGALG00000034163 6453 0.725 - - - - - - - 0.725 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
84. ANAPC16 ENSGALG00000004410 18001 0.724 - - - - - - - 0.724 - - anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:HGNC:26976]
85. CSTB ENSGALG00000014410 7346 0.724 - - - - - - - 0.724 - - cystatin B [Source:NCBI gene;Acc:418267]
86. ATP6V0A2 ENSGALG00000003194 4824 0.723 - - - - - - - 0.723 - - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
87. ARPC1A ENSGALG00000004693 11583 0.721 - - 0.721 - - - - - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
88. PHLDB2 ENSGALG00000015377 8560 0.717 - - - - - - - 0.717 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
89. Sep-06 Sep-06 5961 0.716 - - - - - - - 0.716 - -
90. SENP6 ENSGALG00000015901 8013 0.713 - - - - - - - 0.713 - - SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]
91. MPRIP ENSGALG00000004798 6700 0.711 - - - - - - - 0.711 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
92. ARL3 ENSGALG00000008049 1747 0.711 - - 0.711 - - - - - - - ADP ribosylation factor like GTPase 3 [Source:HGNC Symbol;Acc:HGNC:694]
93. CLMP ENSGALG00000006507 8079 0.711 - - - - - - - 0.711 - - CXADR like membrane protein [Source:HGNC Symbol;Acc:HGNC:24039]
94. MCCC1 ENSGALG00000008785 1376 0.711 - - - - - - - 0.711 - - methylcrotonoyl-CoA carboxylase 1 [Source:NCBI gene;Acc:424962]
95. PPID ENSGALG00000009451 7529 0.709 - - - - - - - 0.709 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
96. ALAS1 3660 0.708 - - - - - - - 0.708 - - 5'-aminolevulinate synthase 1, transcript variant X1
97. NSMCE2 ENSGALG00000043439 5658 0.707 - - - - - - - 0.707 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
98. HBG1 HBG1 468163 0.705 - - - - - - 0.705 - - -
99. BET1L ENSGALG00000004172 5305 0.705 - - - - - - - 0.705 - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
100. PTPA ENSGALG00000036965 2366 0.701 - - - - - - - 0.701 - - protein phosphatase 2 phosphatase activator [Source:NCBI gene;Acc:426329]

There are 5 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA