Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP31

Gene Name Gene ID Reads Annotation
USP31 ENSGALG00000006286 28 ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]











Genes with expression patterns similar to USP31

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP31 ENSGALG00000006286 28 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ubiquitin specific peptidase 31 [Source:HGNC Symbol;Acc:HGNC:20060]
2. C1orf116 ENSGALG00000001091 34 1.648 - - - 0.832 - - - - - 0.816 chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:HGNC:28667]
3. PCDH15 ENSGALG00000002744 34 1.545 - - - - - 0.786 - - - 0.759 protocadherin related 15 [Source:NCBI gene;Acc:423644]
4. DES ENSGALG00000011306 16 0.935 - - - - - 0.935 - - - - desmin [Source:HGNC Symbol;Acc:HGNC:2770]
5. LOC418298 ENSGALG00000014680 23 0.931 - - - - - 0.931 - - - - solute carrier family 25 member 33-like
6. ESRP1 ENSGALG00000031076 28 0.931 - - - - - 0.931 - - - - epithelial splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25966]
7. GMDS 284 0.895 - - - - - - - - - 0.895 GDP-mannose 4,6-dehydratase, transcript variant X3
8. CAPN13 ENSGALG00000020084 6 0.894 - - - 0.894 - - - - - - calpain 13 [Source:HGNC Symbol;Acc:HGNC:16663]
9. KLHL8 ENSGALG00000011017 3 0.894 - - - 0.894 - - - - - - kelch like family member 8 [Source:HGNC Symbol;Acc:HGNC:18644]
10. PKD2 ENSGALG00000010921 55 0.894 - - - 0.894 - - - - - - polycystin 2, transient receptor potential cation channel [Source:NCBI gene;Acc:422585]
11. MYO1D ENSGALG00000000674 14 0.894 - - - 0.894 - - - - - - myosin ID [Source:HGNC Symbol;Acc:HGNC:7598]
12. IL15RA ENSGALG00000008153 3 0.894 - - - 0.894 - - - - - - interleukin 15 receptor, alpha, transcript variant X2
13. MMP10 ENSGALG00000019063 2 0.894 - - - 0.894 - - - - - - matrix metallopeptidase 10 [Source:NCBI gene;Acc:418981]
14. C21H1orf158 C21H1orf158 1 0.894 - - - 0.894 - - - - - -
15. FAM212B ENSGALG00000001480 2 0.894 - - - 0.894 - - - - - - family with sequence similarity 212, member B
16. ALDH8A1 ENSGALG00000013969 8 0.894 - - - 0.894 - - - - - - aldehyde dehydrogenase 8 family member A1 [Source:HGNC Symbol;Acc:HGNC:15471]
17. BRI3BP ENSGALG00000002913 3 0.894 - - - 0.894 - - - - - - BRI3 binding protein [Source:NCBI gene;Acc:416812]
18. ENSGALG00000005511 ENSGALG00000005511 7 0.894 - - - 0.894 - - - - - -
19. FGF20 ENSGALG00000013663 20 0.894 - - - 0.894 - - - - - - fibroblast growth factor 20 [Source:HGNC Symbol;Acc:HGNC:3677]
20. MECR ENSGALG00000032763 110 0.894 - - - 0.894 - - - - - - mitochondrial trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:19691]
21. MUC6 ENSGALG00000040530 11 0.894 - - - 0.894 - - - - - - mucin 6, oligomeric mucus/gel-forming [Source:HGNC Symbol;Acc:HGNC:7517]
22. ENSGALG00000000526 ENSGALG00000000526 2 0.894 - - - 0.894 - - - - - -
23. ENSGALG00000000099 ENSGALG00000000099 16 0.894 - - - 0.894 - - - - - -
24. CTRB2 ENSGALG00000000038 6 0.894 - - - 0.894 - - - - - - chymotrypsinogen B2 [Source:NCBI gene;Acc:431235]
25. ENSGALG00000025801 ENSGALG00000025801 5 0.894 - - - 0.894 - - - - - -
26. ACOT1L ENSGALG00000008752 6 0.894 - - - 0.894 - - - - - - acyl-CoA thioesterase 1-like
27. MTMR3 ENSGALG00000008051 9 0.894 - - - 0.894 - - - - - - myotubularin related protein 3 [Source:NCBI gene;Acc:417015]
28. PGM2L1 ENSGALG00000017304 14 0.892 - - - - - 0.892 - - - - phosphoglucomutase 2 like 1 [Source:HGNC Symbol;Acc:HGNC:20898]
29. PIWIL1 ENSGALG00000002645 23 0.886 - - - - - 0.886 - - - - piwi like RNA-mediated gene silencing 1 [Source:NCBI gene;Acc:416804]
30. SGIP1 ENSGALG00000011113 20 0.884 - - - - - 0.884 - - - - SH3 domain GRB2 like endophilin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:25412]
31. DNAJC13 ENSGALG00000035068 180 0.88 - - - - - 0.880 - - - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
32. MASTL ENSGALG00000007507 19 0.88 - - - - - 0.880 - - - - microtubule associated serine/threonine kinase like, transcript variant X2
33. gga-mir-6659 ENSGALG00000028216 6 0.88 - - - - - 0.880 - - - - gga-mir-6659 [Source:miRBase;Acc:MI0022479]
34. BMP2K ENSGALG00000010885 37 0.869 - - - - - 0.869 - - - - BMP2 inducible kinase [Source:HGNC Symbol;Acc:HGNC:18041]
35. LRRC31 ENSGALG00000023616 55 0.868 - - - - - - - - - 0.868 leucine rich repeat containing 31 [Source:HGNC Symbol;Acc:HGNC:26261]
36. ENSGALG00000023464 ENSGALG00000023464 3 0.865 - - - - - 0.865 - - - -
37. PDE8B ENSGALG00000004339 2 0.865 - - - - - - - - - 0.865 phosphodiesterase 8B, transcript variant X3
38. ASCL4 ENSGALG00000019304 1 0.864 - - - - - 0.864 - - - - achaete-scute family bHLH transcription factor 4
39. DUPD1 ENSGALG00000005019 18 0.864 - - - - - 0.864 - - - - dual specificity phosphatase and pro isomerase domain containing 1 [Source:NCBI gene;Acc:423733]
40. ENSGALG00000003440 ENSGALG00000003440 42 0.864 - - - - - 0.864 - - - -
41. ENSGALG00000008594 ENSGALG00000008594 54 0.864 - - - - - 0.864 - - - -
42. gga-mir-6641 ENSGALG00000028818 1 0.864 - - - - - 0.864 - - - - gga-mir-6641 [Source:miRBase;Acc:MI0022460]
43. CSF2RA ENSGALG00000016693 5 0.864 - - - - - 0.864 - - - - colony stimulating factor 2 receptor alpha subunit [Source:NCBI gene;Acc:418666]
44. ADRB3 1 0.864 - - - - - 0.864 - - - - adrenoceptor beta 3
45. RSPH1 ENSGALG00000043976 6 0.864 - - - - - 0.864 - - - - radial spoke head component 1 [Source:HGNC Symbol;Acc:HGNC:12371]
46. ENSGALG00000001763 ENSGALG00000001763 8 0.864 - - - - - 0.864 - - - -
47. ATP6V1H ENSGALG00000013621 13 0.864 - - - - - 0.864 - - - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
48. LOC396098 ENSGALG00000015461 3 0.864 - - - - - 0.864 - - - - B6.1
49. FRMD4A ENSGALG00000034992 6 0.864 - - - - - 0.864 - - - - FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
50. PTPRC ENSGALG00000002192 10 0.864 - - - - - 0.864 - - - - protein tyrosine phosphatase, receptor type C [Source:NCBI gene;Acc:386580]
51. ARL10 ENSGALG00000003360 2 0.864 - - - - - 0.864 - - - - ADP ribosylation factor like GTPase 10 [Source:NCBI gene;Acc:416229]
52. SLC4A2 ENSGALG00000034284 3 0.864 - - - - - 0.864 - - - - solute carrier family 4 member 2 [Source:NCBI gene;Acc:395809]
53. ENSGALG00000008364 ENSGALG00000008364 1 0.864 - - - - - 0.864 - - - -
54. KIAA0195 KIAA0195 48 0.864 - - - - - 0.864 - - - -
55. PVRL1 PVRL1 3 0.864 - - - - - 0.864 - - - -
56. LOC426355 ENSGALG00000028985 3 0.864 - - - - - 0.864 - - - - t-SNARE domain-containing protein 1-like, transcript variant X2
57. Sep-12 Sep-12 4 0.864 - - - - - 0.864 - - - -
58. ENSGALG00000005498 ENSGALG00000005498 11 0.864 - - - - - 0.864 - - - -
59. gga-mir-92-2 ENSGALG00000025998 2 0.864 - - - - - 0.864 - - - - gga-mir-92-2 [Source:miRBase;Acc:MI0029335]
60. SEC61A1 ENSGALG00000005966 9 0.864 - - - - - 0.864 - - - - Sec61 translocon alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:18276]
61. AMH ENSGALG00000036346 16 0.864 - - - - - 0.864 - - - - anti-Mullerian hormone [Source:NCBI gene;Acc:395887]
62. ST8SIA6 ENSGALG00000008671 8 0.864 - - - - - 0.864 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
63. HOGA1 ENSGALG00000006134 25 0.864 - - - - - 0.864 - - - - 4-hydroxy-2-oxoglutarate aldolase 1 [Source:HGNC Symbol;Acc:HGNC:25155]
64. HSD17B14 ENSGALG00000007727 3 0.864 - - - - - 0.864 - - - - hydroxysteroid 17-beta dehydrogenase 14
65. ENSGALG00000009953 ENSGALG00000009953 5 0.864 - - - - - 0.864 - - - -
66. RASSF7 ENSGALG00000044251 8 0.864 - - - - - 0.864 - - - - Ras association domain family member 7 [Source:HGNC Symbol;Acc:HGNC:1166]
67. SMAD9 ENSGALG00000017050 11 0.864 - - - - - 0.864 - - - - SMAD family member 9 [Source:NCBI gene;Acc:395543]
68. FGFBP2 ENSGALG00000014501 12 0.864 - - - - - 0.864 - - - - fibroblast growth factor binding protein 2 [Source:NCBI gene;Acc:395094]
69. COL15A1 ENSGALG00000034119 9 0.864 - - - - - 0.864 - - - - collagen type XV alpha 1 chain, transcript variant X6
70. MKNK2 ENSGALG00000003845 1 0.864 - - - - - 0.864 - - - - MAP kinase interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:7111]
71. FAM3D ENSGALG00000007152 4 0.864 - - - - - 0.864 - - - - family with sequence similarity 3 member D [Source:HGNC Symbol;Acc:HGNC:18665]
72. RHCG ENSGALG00000006635 7 0.864 - - - - - 0.864 - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
73. RNF169 ENSGALG00000017309 8 0.864 - - - - - 0.864 - - - - ring finger protein 169 [Source:HGNC Symbol;Acc:HGNC:26961]
74. IL2RG ENSGALG00000005638 21 0.864 - - - - - 0.864 - - - - interleukin 2 receptor subunit gamma [Source:NCBI gene;Acc:395199]
75. DNAAF1 ENSGALG00000003258 115 0.862 - - - - - 0.862 - - - - dynein axonemal assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:30539]
76. H2AFY ENSGALG00000040141 3454 0.861 - - - - - 0.861 - - - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
77. NHSL1 ENSGALG00000026981 11 0.861 - - - - - 0.861 - - - - NHS like 1 [Source:HGNC Symbol;Acc:HGNC:21021]
78. SLC26A7 ENSGALG00000033638 14 0.861 - - - - - 0.861 - - - - solute carrier family 26 member 7 [Source:HGNC Symbol;Acc:HGNC:14467]
79. PHOSPHO1 ENSGALG00000033683 22 0.861 - - - - - 0.861 - - - - phosphoethanolamine/phosphocholine phosphatase [Source:NCBI gene;Acc:395650]
80. THSD7A ENSGALG00000010718 149 0.858 - - - - - - - 0.858 - - thrombospondin type 1 domain containing 7A [Source:HGNC Symbol;Acc:HGNC:22207]
81. NEIL2 ENSGALG00000016664 4 0.853 - - - 0.853 - - - - - - nei like DNA glycosylase 2 [Source:NCBI gene;Acc:422037]
82. ARHGAP39 ENSGALG00000001536 15 0.852 - - - - - - - - - 0.852 Rho GTPase activating protein 39, transcript variant X2
83. ENSGALG00000028367 ENSGALG00000028367 102 0.852 - - - - - - - - - 0.852
84. ARHGAP26 ENSGALG00000033938 31 0.843 - - - - - - - - - 0.843 Rho GTPase activating protein 26 [Source:NCBI gene;Acc:396113]
85. MAPT ENSGALG00000000625 659 0.841 - - - - - 0.841 - - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
86. OSBPL10 45 0.84 - - - - - - - - - 0.840 oxysterol binding protein like 10
87. FHOD1 ENSGALG00000002198 426 0.839 - - - - - 0.839 - - - - formin homology 2 domain containing 1 [Source:NCBI gene;Acc:415672]
88. DOCK8 481 0.835 - - - - - 0.835 - - - - dedicator of cytokinesis 8, transcript variant X1
89. ENSGALG00000026422 ENSGALG00000026422 34 0.835 - - - - - 0.835 - - - -
90. AHR2 ENSGALG00000023742 21 0.835 - - - - - - - 0.835 - - Gallus gallus aryl hydrocarbon receptor 2 (AHR2), mRNA. [Source:RefSeq mRNA;Acc:NM_001319008]
91. CCDC113 20 0.835 - - - - - - - 0.835 - - coiled-coil domain containing 113, transcript variant X2
92. GPR85 ENSGALG00000009439 23 0.834 - - - - - - - - - 0.834 G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
93. ENSGALG00000001629 ENSGALG00000001629 31 0.832 - - - 0.832 - - - - - -
94. SYNE3 ENSGALG00000011076 22 0.831 - - - 0.831 - - - - - - spectrin repeat containing nuclear envelope family member 3 [Source:HGNC Symbol;Acc:HGNC:19861]
95. SIGIRR ENSGALG00000004267 72 0.831 - - - - - - 0.831 - - - single Ig and TIR domain containing [Source:NCBI gene;Acc:422995]
96. ALPI ENSGALG00000023866 19 0.83 - - - 0.830 - - - - - - alkaline phosphatase, intestinal, transcript variant X2
97. PLPPR4 ENSGALG00000025896 120 0.828 - - - - - 0.828 - - - - phospholipid phosphatase related 4 [Source:HGNC Symbol;Acc:HGNC:23496]
98. CHST1 ENSGALG00000008440 156 0.819 - - - - - - - 0.819 - - carbohydrate sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:1969]
99. LYST ENSGALG00000032840 96 0.819 - - - - - 0.819 - - - - lysosomal trafficking regulator [Source:HGNC Symbol;Acc:HGNC:1968]
100. ENSGALG00000013992 ENSGALG00000013992 6 0.818 - - - 0.818 - - - - - -

There are 142 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA