Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USP31

Gene Name Gene ID Reads Annotation
USP31 ENSDARG00000074017 628 ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]










Genes with expression patterns similar to USP31

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USP31 ENSDARG00000074017 628 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 31 [Source:ZFIN;Acc:ZDB-GENE-100210-4]
2. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 2.528 - 0.776 - - - 0.752 1.000 - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
3. snx29 ENSDARG00000077317 239 2.343 - 0.800 - - 0.817 0.726 - - - sorting nexin 29 [Source:ZFIN;Acc:ZDB-GENE-121105-13]
4. SLC29A4 ENSDARG00000059690 470 1.882 - - - - - 0.882 1.000 - - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
5. igfbp1a ENSDARG00000099351 1717 1.823 - - - - - 0.823 1.000 - - insulin-like growth factor binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-021231-1]
6. stoml1 ENSDARG00000062142, ENSDARG00000110862 113 1.774 - - - - 0.858 0.916 - - - stomatin (EPB72)-like 1 [Source:ZFIN;Acc:ZDB-GENE-070209-241]
7. ZNF462 ENSDARG00000112909 1132 1.765 - - - - - 0.765 1.000 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
8. dkk2 ENSDARG00000076420 553 1.757 - 0.757 - - - - 1.000 - - dickkopf WNT signaling pathway inhibitor 2 [Source:ZFIN;Acc:ZDB-GENE-080204-14]
9. echdc2 ENSDARG00000016607 719 1.753 - - - - 0.753 - 1.000 - - enoyl CoA hydratase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030219-147]
10. CAMK2G CAMK2G 3537 1.733 - - - - - 0.734 0.999 - -
11. kif5aa ENSDARG00000098936 2428 1.732 - - - - - 0.732 1.000 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
12. TNRC18 ENSDARG00000077052 1095 1.724 - - - - - 0.724 1.000 - - trinucleotide repeat containing 18 [Source:ZFIN;Acc:ZDB-GENE-100326-1]
13. mkrn2 ENSDARG00000007630 127 1.72 - - - - 0.877 0.843 - - - makorin, ring finger protein, 2 [Source:ZFIN;Acc:ZDB-GENE-020213-2]
14. usb1 ENSDARG00000003841 524 1.701 0.842 - - - - 0.859 - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
15. BX511021.3 ENSDARG00000117414 592 1.699 - 0.831 - - - 0.868 - - -
16. UNKL ENSDARG00000037838 1086 1.697 0.861 - - - - 0.836 - - - unkempt family zinc finger-like [Source:ZFIN;Acc:ZDB-GENE-131120-196]
17. lnx1 ENSDARG00000043323, ENSDARG00000113875 1199 1.675 - 0.865 - - 0.810 - - - - ligand of numb-protein X 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9439]
18. rapgef1a ENSDARG00000043593 416 1.661 - 0.842 - - - 0.819 - - - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
19. HID1 HID1 282 1.66 - 0.825 - - - 0.835 - - -
20. zhx2 zhx2 365 1.652 - 0.804 - - - 0.848 - - -
21. ubap2l ENSDARG00000063219 1147 1.652 - 0.874 - - 0.778 - - - - ubiquitin associated protein 2-like [Source:ZFIN;Acc:ZDB-GENE-060503-244]
22. CELF6 ENSDARG00000101933 228 1.639 - - - - 0.866 0.773 - - - CUGBP Elav-like family member 6 [Source:HGNC Symbol;Acc:HGNC:14059]
23. dhrs13l1 ENSDARG00000098746 102 1.632 0.919 - - - - 0.713 - - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
24. dcakd ENSDARG00000061638 120 1.629 - 0.855 - - - 0.774 - - - dephospho-CoA kinase domain containing [Source:ZFIN;Acc:ZDB-GENE-060825-226]
25. wfikkn2b ENSDARG00000059139 45 1.622 - - 0.726 - 0.896 - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
26. HHLA2 HHLA2 295 1.621 - 0.787 - - 0.834 - - - -
27. TMEM246 ENSDARG00000061553 168 1.615 - 0.837 - - - 0.778 - - - transmembrane protein 246 [Source:ZFIN;Acc:ZDB-GENE-061013-692]
28. ARHGAP32 ARHGAP32 670 1.614 0.858 - - - - 0.756 - - -
29. ftr51 ENSDARG00000029105 103 1.613 0.726 0.887 - - - - - - - finTRIM family, member 51 [Source:ZFIN;Acc:ZDB-GENE-081104-54]
30. zbtb2b ENSDARG00000028086, ENSDARG00000110834 1609 1.611 - - - - 0.809 0.802 - - - zinc finger and BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2753]
31. cab39l ENSDARG00000036658 204 1.596 0.749 - - - 0.847 - - - - calcium binding protein 39-like [Source:ZFIN;Acc:ZDB-GENE-041114-204]
32. rab14_1 ENSDARG00000074246 481 1.595 - - - - 0.761 0.834 - - - RAB14, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-030826-20]
33. BX465851.1 BX465851.1 237 1.591 0.724 - - - - 0.867 - - -
34. pan2 ENSDARG00000074675 641 1.59 - 0.727 - - - 0.863 - - - poly(A) specific ribonuclease subunit PAN2 [Source:ZFIN;Acc:ZDB-GENE-030131-3113]
35. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1.59 0.742 - - - - 0.848 - - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
36. ubp1 ENSDARG00000018000 1047 1.587 - - - - 0.743 0.844 - - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
37. tph1b ENSDARG00000036082, ENSDARG00000112888 79 1.585 0.749 0.836 - - - - - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
38. ern1 ENSDARG00000013997 473 1.583 - 0.743 - - - 0.840 - - - endoplasmic reticulum to nucleus signaling 1 [Source:ZFIN;Acc:ZDB-GENE-050522-431]
39. scpp5 ENSDARG00000078622 15 1.58 0.742 - - - - 0.838 - - - secretory calcium-binding phosphoprotein 5 [Source:ZFIN;Acc:ZDB-GENE-090313-256]
40. smcr8a ENSDARG00000052818 559 1.577 - 0.790 - - - 0.787 - - - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
41. armc1l ENSDARG00000020887 1219 1.573 - 0.805 - - 0.768 - - - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
42. RNF5 ENSDARG00000075606 1730 1.572 - 0.757 - - - 0.815 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
43. PROCA1 ENSDARG00000069823 343 1.565 - - - - 0.736 0.829 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
44. shisa3 ENSDARG00000075467 485 1.562 0.718 0.844 - - - - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
45. UBL7 UBL7 197 1.562 0.743 - - - - 0.819 - - -
46. deptor ENSDARG00000040930 191 1.561 - - - - 0.853 0.708 - - - DEP domain containing MTOR-interacting protein [Source:ZFIN;Acc:ZDB-GENE-061013-453]
47. hs3st1l2 ENSDARG00000035578 279 1.561 0.713 0.848 - - - - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-070202-3]
48. CDCA4 ENSDARG00000042319 7918 1.56 0.716 - - - - 0.844 - - - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
49. ZNF337_18 ZNF337_18 152 1.559 - 0.730 - - - 0.829 - - -
50. smyd4 ENSDARG00000060983 106 1.559 - 0.700 - - 0.859 - - - - SET and MYND domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-248]
51. CABZ01039859.1 ENSDARG00000076361 540 1.558 - 0.750 - - 0.808 - - - - beta-1,4 N-acetylgalactosaminyltransferase 2-like [Source:NCBI gene;Acc:100333855]
52. BX927294.1 BX927294.1 361 1.556 - 0.811 - - - 0.745 - - -
53. chrnb2b ENSDARG00000017790 155 1.555 - - - - 0.757 0.798 - - - cholinergic receptor, nicotinic, beta 2b [Source:ZFIN;Acc:ZDB-GENE-070821-3]
54. SENP2 ENSDARG00000073837 1411 1.554 - - - - 0.816 0.738 - - - SUMO specific peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060810-183]
55. TXNDC16 ENSDARG00000032256 231 1.549 - 0.824 - - - 0.725 - - - thioredoxin domain containing 16 [Source:ZFIN;Acc:ZDB-GENE-100712-1]
56. pan3 ENSDARG00000031637, ENSDARG00000111004 613 1.549 - 0.789 - - - 0.760 - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
57. caly ENSDARG00000036008 1002 1.546 0.744 - - - - 0.802 - - - calcyon neuron-specific vesicular protein [Source:ZFIN;Acc:ZDB-GENE-090313-405]
58. creg2 ENSDARG00000000666 643 1.543 - 0.822 - - 0.721 - - - - cellular repressor of E1A-stimulated genes 2 [Source:ZFIN;Acc:ZDB-GENE-041114-173]
59. SMC6 ENSDARG00000091821 165 1.538 - - - - 0.835 0.703 - - - structural maintenance of chromosomes 6 [Source:ZFIN;Acc:ZDB-GENE-110303-1]
60. slc30a10 ENSDARG00000103983 46 1.537 0.748 - - - - 0.789 - - - solute carrier family 30, member 10 [Source:ZFIN;Acc:ZDB-GENE-060608-2]
61. pipox ENSDARG00000055591 260 1.526 - 0.758 - - 0.768 - - - - pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
62. LPHN3 LPHN3 195 1.522 0.748 - - - - 0.774 - - -
63. babam1 ENSDARG00000077526 776 1.518 - - - - 0.752 0.766 - - - BRISC and BRCA1 A complex member 1 [Source:ZFIN;Acc:ZDB-GENE-040808-6]
64. atg4a ENSDARG00000014531 481 1.517 - 0.782 - - 0.735 - - - - autophagy related 4A, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-050522-430]
65. cx34.4 ENSDARG00000075854 168 1.516 - - - - 0.725 0.791 - - - connexin 34.4 [Source:ZFIN;Acc:ZDB-GENE-040406-3]
66. TRABD2A ENSDARG00000089701 401 1.506 - 0.801 - - 0.705 - - - - TraB domain containing 2A [Source:ZFIN;Acc:ZDB-GENE-030131-4053]
67. ADAM22 ENSDARG00000060532 2259 1.506 - 0.736 - - - 0.770 - - - ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
68. NECAB3 ENSDARG00000074794 379 1.504 - 0.711 - - - 0.793 - - - N-terminal EF-hand calcium binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-131121-74]
69. cyp51 ENSDARG00000042641 458 1.502 - 0.774 - - - 0.728 - - - cytochrome P450, family 51 [Source:ZFIN;Acc:ZDB-GENE-040625-2]
70. lad1 ENSDARG00000022698 127 1.502 - 0.792 - - 0.710 - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
71. eefsec ENSDARG00000004696 791 1.49 - 0.746 - - 0.744 - - - - eukaryotic elongation factor, selenocysteine-tRNA-specific [Source:ZFIN;Acc:ZDB-GENE-051120-72]
72. sncgb ENSDARG00000109715 1014 1.486 - 0.767 - - - 0.719 - - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
73. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.475 - - - - 0.766 0.709 - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
74. MAP4 MAP4 315 1.474 - - - - 0.774 0.700 - - -
75. TNKS TNKS 2775 1.473 0.719 - - - - 0.754 - - -
76. ttc12 ENSDARG00000056896 97 1.472 - 0.722 0.750 - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
77. waca ENSDARG00000012577 1794 1.469 - 0.767 - - - 0.702 - - - WW domain containing adaptor with coiled-coil a [Source:ZFIN;Acc:ZDB-GENE-030131-2624]
78. CABZ01049057.1 CABZ01049057.1 479 1.467 - - 0.736 - - 0.731 - - -
79. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 1.466 - 0.721 - - - 0.745 - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
80. iba57 ENSDARG00000063446 324 1.448 0.724 0.724 - - - - - - - IBA57, iron-sulfur cluster assembly [Source:ZFIN;Acc:ZDB-GENE-060929-712]
81. mnd1 ENSDARG00000074451 182 1.447 - 0.701 - - - 0.746 - - - meiotic nuclear divisions 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-116]
82. TUBB8P7 TUBB8P7 1353 1 - - - - - - 1.000 - -
83. CABZ01075242.1_1 ENSDARG00000114227 1012 1 - - - - - - 1.000 - -
84. alas2 ENSDARG00000038643, ENSDARG00000113125 4935 1 - - - - - - 1.000 - - aminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
85. adssl ENSDARG00000012399 2271 1 - - - - - - 1.000 - - adenylosuccinate synthase, like [Source:ZFIN;Acc:ZDB-GENE-020419-28]
86. C20H2orf44 C20H2orf44 486 1 - - - - - - 1.000 - -
87. zbtb18 ENSDARG00000028228 3653 1 - - - - - - 1.000 - - zinc finger and BTB domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-050419-73]
88. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 1 - - - - - - 1.000 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
89. galnt11 ENSDARG00000063636 1188 1 - - - - - - 1.000 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]
90. CU457815.1 ENSDARG00000115823 1005 1 - - - - - - 1.000 - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
91. arrdc3a ENSDARG00000052690 2280 1 - - - - - - 1.000 - - arrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
92. lgi2a ENSDARG00000111069 965 1 - - - - - - 1.000 - - leucine-rich repeat LGI family, member 2a [Source:ZFIN;Acc:ZDB-GENE-060217-2]
93. CR388132.2 ENSDARG00000104041 640 1 - - - - - - 1.000 - -
94. pigo ENSDARG00000011743 928 1 - - - - - - 1.000 - - phosphatidylinositol glycan anchor biosynthesis, class O [Source:ZFIN;Acc:ZDB-GENE-091204-80]
95. inpp5e ENSDARG00000103926 567 1 - - - - - - 1.000 - - inositol polyphosphate-5-phosphatase E [Source:ZFIN;Acc:ZDB-GENE-050809-23]
96. cux2b ENSDARG00000086345 519 1 - - - - - - 1.000 - - cut-like homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-081104-176]
97. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 1 - - - - - - 1.000 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
98. xpo4 ENSDARG00000010281, ENSDARG00000109463 2010 1 - - - - - - 1.000 - - exportin 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3062]
99. ARHGAP35 2409 1 - - - - - - 1.000 - - Rho GTPase activating protein 35b, transcript variant X2
100. med6 ENSDARG00000034734 2711 1 - - - - - - 1.000 - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]

There are 1954 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA