Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP30

Gene Name Gene ID Reads Annotation
USP30 ENSGALG00000040265 2000 ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]











Genes with expression patterns similar to USP30

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP30 ENSGALG00000040265 2000 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
2. UQCRC1 ENSGALG00000005789 23201 1.484 - - - - - - 0.738 0.746 - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
3. TMEM69 ENSGALG00000010279 716 1 - - - - - - - 1.000 - - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
4. GNA12 ENSGALG00000004368 692 1 - - - - - - - 1.000 - - G protein subunit alpha 12 [Source:HGNC Symbol;Acc:HGNC:4380]
5. STAMBP ENSGALG00000042555 1362 1 - - - - - - - 1.000 - - STAM binding protein [Source:HGNC Symbol;Acc:HGNC:16950]
6. C9orf89 C9orf89 3056 1 - - - - - - - 1.000 - -
7. TDRD1 ENSGALG00000046180 612 1 - - - - - - - 1.000 - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
8. ENSGALG00000028413 ENSGALG00000028413 551 1 - - - - - - - 1.000 - -
9. PRRX2 ENSGALG00000028236 1990 1 - - - - - - - 1.000 - - paired related homeobox 2 [Source:NCBI gene;Acc:396314]
10. USP42 ENSGALG00000003378 1392 1 - - - - - - - 1.000 - - ubiquitin specific peptidase 42 [Source:HGNC Symbol;Acc:HGNC:20068]
11. TNFRSF21 ENSGALG00000016719 2762 1 - - - - - - - 1.000 - - TNF receptor superfamily member 21 [Source:NCBI gene;Acc:422062]
12. CREB1 ENSGALG00000008494 2219 0.999 - - - - - - - 0.999 - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]
13. VEGFC ENSGALG00000010847 2197 0.999 - - - - - - - 0.999 - - vascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]
14. ZNF462 ENSGALG00000015451 12653 0.999 - - - - - - - 0.999 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
15. CTU2 4818 0.999 - - - - - - - 0.999 - - cytosolic thiouridylase subunit 2, transcript variant X3
16. SIN3A ENSGALG00000001644 1141 0.999 - - - - - - - 0.999 - - SIN3 transcription regulator family member A [Source:NCBI gene;Acc:415307]
17. RRBP1 ENSGALG00000008676 5376 0.999 - - - - - - - 0.999 - - ribosome binding protein 1 [Source:NCBI gene;Acc:396414]
18. SLBP ENSGALG00000015712 5586 0.999 - - - - - - - 0.999 - - stem-loop binding protein [Source:NCBI gene;Acc:422902]
19. SLC52A3 ENSGALG00000006194 3952 0.998 - - - - - - - 0.998 - - solute carrier family 52 member 3 [Source:HGNC Symbol;Acc:HGNC:16187]
20. VPS36 ENSGALG00000017026 3658 0.998 - - - - - - - 0.998 - - vacuolar protein sorting 36 homolog [Source:HGNC Symbol;Acc:HGNC:20312]
21. ADAR ENSGALG00000021475 6004 0.997 - - - - - - - 0.997 - - adenosine deaminase, RNA specific [Source:HGNC Symbol;Acc:HGNC:225]
22. PPAT ENSGALG00000013728 7563 0.997 - - - - - - - 0.997 - - phosphoribosyl pyrophosphate amidotransferase [Source:NCBI gene;Acc:422743]
23. GYG1 ENSGALG00000035535 6311 0.997 - - - - - - - 0.997 - - glycogenin 1 [Source:NCBI gene;Acc:425050]
24. PHAX ENSGALG00000014691 8114 0.997 - - - - - - - 0.997 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
25. CWC22 ENSGALG00000009001 5984 0.997 - - - - - - - 0.997 - - CWC22 spliceosome associated protein homolog [Source:NCBI gene;Acc:424123]
26. INTS2 ENSGALG00000005269 6966 0.996 - - - - - - - 0.996 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
27. FAT1 ENSGALG00000013579 6030 0.996 - - - - - - - 0.996 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
28. PTK7 ENSGALG00000008609 8081 0.995 - - - - - - - 0.995 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
29. KLHDC2 ENSGALG00000012244 12903 0.994 - - - - - - - 0.994 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
30. LMO7 ENSGALG00000016920 3809 0.994 - - - - - - - 0.994 - - LIM domain 7 [Source:HGNC Symbol;Acc:HGNC:6646]
31. PDCD6 ENSGALG00000013400 7611 0.993 - - - - - - - 0.993 - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
32. MAP4K3 ENSGALG00000039720 5124 0.982 - - - - - - - 0.982 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
33. WDFY3 10775 0.981 - - - - - - - 0.981 - - WD repeat and FYVE domain containing 3, transcript variant X7
34. NAA30 ENSGALG00000012098 4681 0.98 - - - - - - - 0.980 - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
35. LAMTOR2 ENSGALG00000029881 35356 0.978 - - - - - - - 0.978 - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796]
36. ACTR6 ENSGALG00000040976 31271 0.962 - - - - - - - 0.962 - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
37. NSUN4 ENSGALG00000010360 3567 0.962 - - - - - - - 0.962 - - NOP2/Sun RNA methyltransferase family member 4 [Source:NCBI gene;Acc:424613]
38. C11orf57 C11orf57 4971 0.961 - - - - - - - 0.961 - -
39. CPSF4 ENSGALG00000004714 14353 0.961 - - - - - - - 0.961 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
40. SPATA20 ENSGALG00000006857 3506 0.96 - - - - - - - 0.960 - - spermatogenesis associated 20 [Source:HGNC Symbol;Acc:HGNC:26125]
41. BMP4 ENSGALG00000012429 4306 0.957 - - - - - - - 0.957 - - bone morphogenetic protein 4 [Source:NCBI gene;Acc:396165]
42. TIMM23B ENSGALG00000002089 8122 0.952 - - - - - - - 0.952 - - translocase of inner mitochondrial membrane 23 homolog B
43. MCM6 ENSGALG00000012348 12523 0.951 - - - - - - - 0.951 - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
44. CSNK2A1 ENSGALG00000006197 41409 0.948 - - - - - - - 0.948 - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
45. RPL7L1 ENSGALG00000011974 20292 0.943 - - - - - - - 0.943 - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
46. MYBL2 ENSGALG00000003503 15875 0.942 - - - - - - - 0.942 - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
47. MED6 ENSGALG00000029743 9414 0.941 - - - - - - - 0.941 - - mediator complex subunit 6 [Source:NCBI gene;Acc:426282]
48. FARP1 ENSGALG00000016886 13132 0.938 - - - - - - - 0.938 - - FERM, ARH/RhoGEF and pleckstrin domain protein 1 [Source:NCBI gene;Acc:418781]
49. PDCL3 ENSGALG00000016772 14897 0.938 - - - - - - - 0.938 - - phosducin like 3 [Source:NCBI gene;Acc:418709]
50. ZNF367 ENSGALG00000012629 3215 0.935 - - - - - - - 0.935 - - zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]
51. DHCR24 ENSGALG00000010798 3963 0.935 - - - - - - - 0.935 - - 24-dehydrocholesterol reductase [Source:NCBI gene;Acc:424661]
52. HSPA12A ENSGALG00000009248 7783 0.932 - - - - - - - 0.932 - - heat shock protein family A (Hsp70) member 12A [Source:HGNC Symbol;Acc:HGNC:19022]
53. LAPTM4A ENSGALG00000016479 15973 0.927 - - - - - - - 0.927 - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
54. MGST1 ENSGALG00000013098 17632 0.927 - - - - - - - 0.927 - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
55. THRAP3 ENSGALG00000002144 21958 0.926 - - - - - - - 0.926 - - thyroid hormone receptor associated protein 3 [Source:NCBI gene;Acc:419623]
56. DERL1 ENSGALG00000033950 15074 0.908 - - - - - - - 0.908 - - derlin 1 [Source:NCBI gene;Acc:420350]
57. TAF15 ENSGALG00000002060 12320 0.899 - - - - - - - 0.899 - - TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
58. TMEM199 ENSGALG00000023757 10781 0.891 - - - - - - - 0.891 - - transmembrane protein 199 [Source:HGNC Symbol;Acc:HGNC:18085]
59. FBXO9 ENSGALG00000016320 9600 0.875 - - - - - - - 0.875 - - F-box protein 9 [Source:NCBI gene;Acc:421895]
60. GLO1 ENSGALG00000010127 31662 0.874 - - - - - - - 0.874 - - glyoxalase I [Source:HGNC Symbol;Acc:HGNC:4323]
61. ATP6V0B ENSGALG00000010091 14901 0.872 - - - - - - - 0.872 - - ATPase H+ transporting V0 subunit b [Source:NCBI gene;Acc:424575]
62. CKAP4 ENSGALG00000012659 36398 0.868 - - - - - - - 0.868 - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
63. EIF1 ENSGALG00000028517 124882 0.862 - - - - - - - 0.862 - - eukaryotic translation initiation factor 1 [Source:NCBI gene;Acc:420037]
64. ANP32E ENSGALG00000039891 35925 0.861 - - - - - - - 0.861 - - acidic nuclear phosphoprotein 32 family member E [Source:NCBI gene;Acc:426109]
65. MAD2L1BP ENSGALG00000027871 7835 0.854 - - - - - - - 0.854 - - MAD2L1 binding protein [Source:HGNC Symbol;Acc:HGNC:21059]
66. GTLF3B GTLF3B 5079 0.854 - - - - - - - 0.854 - -
67. ARHGEF7 ENSGALG00000031009 10090 0.845 - - - - - - - 0.845 - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
68. ATP5MC1 ENSGALG00000001330 37766 0.833 - - - - - - - 0.833 - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
69. UPF2 ENSGALG00000033772 9548 0.831 - - - - - - - 0.831 - - UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
70. EIF5 ENSGALG00000011464 62584 0.831 - - - - - - - 0.831 - - eukaryotic translation initiation factor 5 [Source:NCBI gene;Acc:423479]
71. RBM17 ENSGALG00000006332 12656 0.831 - - - - - - - 0.831 - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
72. ENSGALG00000021694 ENSGALG00000021694 26011 0.822 - - - - - - - 0.822 - -
73. POLR2E ENSGALG00000002591 26405 0.818 - - - - - - - 0.818 - - RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
74. ANKRD10 ENSGALG00000030125 3611 0.81 - - - - - - 0.810 - - - ankyrin repeat domain 10 [Source:NCBI gene;Acc:418760]
75. TRA2B ENSGALG00000006531 40566 0.809 - - - - - - - 0.809 - - transformer 2 beta homolog (Drosophila) [Source:NCBI gene;Acc:395403]
76. NDUFV2 ENSGALG00000036625 29234 0.793 - - - - - - - 0.793 - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:HGNC Symbol;Acc:HGNC:7717]
77. MTA1 ENSGALG00000002803 11572 0.787 - - - - - - - 0.787 - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
78. NUSAP1 ENSGALG00000008584 9955 0.776 - - - - - - - 0.776 - - nucleolar and spindle associated protein 1 [Source:NCBI gene;Acc:423213]
79. EIF2B3 ENSGALG00000010140 7992 0.775 - - - - - - 0.775 - - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
80. TCTN3 ENSGALG00000010517 3985 0.76 - - - - - - 0.760 - - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
81. CTDSPL2 ENSGALG00000008199 3534 0.76 - - - - - - 0.760 - - - CTD small phosphatase like 2 [Source:NCBI gene;Acc:415574]
82. SPRED1 ENSGALG00000028203 6520 0.754 - - - - - - - 0.754 - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
83. MMD ENSGALG00000003078 21311 0.754 - - - - - - - 0.754 - - monocyte to macrophage differentiation associated [Source:NCBI gene;Acc:417397]
84. MPPED1 ENSGALG00000014186 5726 0.752 - - - - - - 0.752 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
85. MAP3K7 ENSGALG00000015596 15164 0.752 - - - - - - 0.752 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
86. CEP78 ENSGALG00000015179 5227 0.75 - - - - - - 0.750 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
87. HSPA4 ENSGALG00000040882 20966 0.749 - - - - - - 0.749 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
88. ALAS1 3660 0.747 - - - - - - 0.747 - - - 5'-aminolevulinate synthase 1, transcript variant X1
89. CHRAC1 ENSGALG00000040823 5695 0.745 - - - - - - 0.745 - - - chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
90. DDX20 ENSGALG00000001504 3367 0.743 - - - - - - 0.743 - - - DEAD-box helicase 20 [Source:HGNC Symbol;Acc:HGNC:2743]
91. HEATR2 HEATR2 2143 0.741 - - - - - - 0.741 - - -
92. SURF1 ENSGALG00000033754 2130 0.739 - - - - - - 0.739 - - - SURF1, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:417157]
93. TKT ENSGALG00000005309 19801 0.735 - - - - - - - 0.735 - - transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
94. APIP ENSGALG00000031286 6838 0.734 - - - - - - 0.734 - - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
95. CHM ENSGALG00000006906 4953 0.734 - - - - - - 0.734 - - - CHM, Rab escort protein 1 [Source:NCBI gene;Acc:422266]
96. POLE3 ENSGALG00000008873 9161 0.734 - - - - - - 0.734 - - - DNA polymerase epsilon 3, accessory subunit [Source:NCBI gene;Acc:417275]
97. EVL ENSGALG00000011209 5440 0.733 - - - - - - 0.733 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
98. CCDC59 ENSGALG00000028648 9272 0.731 - - - - - - 0.731 - - - coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]
99. GNG12 ENSGALG00000026591 5817 0.731 - - - - - - 0.731 - - - G protein subunit gamma 12, transcript variant X21
100. ESF1 ENSGALG00000034768 8610 0.73 - - - - - - 0.730 - - - ESF1 nucleolar pre-rRNA processing protein homolog [Source:NCBI gene;Acc:428551]

There are 57 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA