Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP25

Gene Name Gene ID Reads Annotation
USP25 ENSGALG00000015693 2567 ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]











Genes with expression patterns similar to USP25

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP25 ENSGALG00000015693 2567 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
2. FBXO28 ENSGALG00000009331 2871 1.872 - - - - - - 0.887 0.985 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
3. ENSGALG00000000514 ENSGALG00000000514 9906 1.77 - - - - - - 0.870 0.900 - -
4. CXorf56 ENSGALG00000008652 7848 1.749 - - - - - - 0.785 0.964 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
5. FAM49B ENSGALG00000036490 7984 1.74 - - - - - - 0.802 0.938 - - family with sequence similarity 49 member B [Source:HGNC Symbol;Acc:HGNC:25216]
6. CTTN ENSGALG00000007700 709 1.719 - - - - - - - 0.995 0.724 - cortactin [Source:NCBI gene;Acc:396455]
7. CEPT1 ENSGALG00000000142 4219 1.709 - - - - - - 0.762 0.947 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
8. RPN2 ENSGALG00000003815 18864 1.66 - - - - - - 0.735 0.925 - - ribophorin II [Source:NCBI gene;Acc:419177]
9. PFKP ENSGALG00000006939 10149 1.551 - - - - - - 0.705 0.846 - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
10. C3H6ORF154 C3H6ORF154 1078 0.996 - - - - - - - 0.996 - -
11. HES5 ENSGALG00000001141 6514 0.996 - - - - - - - 0.996 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
12. MSC ENSGALG00000037777 1109 0.995 - - - - - - - 0.995 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
13. ACSBG2 ENSGALG00000001749 1681 0.995 - - - - - - - 0.995 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
14. EIF2A ENSGALG00000010401 2201 0.995 - - - - - - - 0.995 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
15. MAN2A2 ENSGALG00000033790 2717 0.995 - - - - - - - 0.995 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
16. CA9 ENSGALG00000021340 1431 0.995 - - - - - - - 0.995 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
17. NPHP3 ENSGALG00000034586 1465 0.995 - - - - - - - 0.995 - - nephrocystin 3, transcript variant X1
18. TBC1D32 ENSGALG00000014876 681 0.995 - - - - - - - 0.995 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
19. AP1S2 ENSGALG00000016551 421 0.995 - - - - - - - 0.995 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
20. RGCC ENSGALG00000016954 1282 0.995 - - - - - - - 0.995 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
21. USP54 ENSGALG00000005232 2749 0.995 - - - - - - - 0.995 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
22. SLC38A11 ENSGALG00000011052 386 0.995 - - - - - - - 0.995 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
23. APC ENSGALG00000000220 1266 0.994 - - - - - - - 0.994 - - APC, WNT signaling pathway regulator, transcript variant X12
24. SLC16A2 ENSGALG00000007748 446 0.994 - - - - - - - 0.994 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
25. CCM2 ENSGALG00000005612 323 0.994 - - - - - - - 0.994 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
26. LONRF2 ENSGALG00000016768 193 0.994 - - - - - - - 0.994 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
27. PIGG ENSGALG00000015349 314 0.994 - - - - - - - 0.994 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
28. MSANTD1 ENSGALG00000015628 154 0.994 - - - - - - - 0.994 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
29. KIAA1191 ENSGALG00000003370 2599 0.994 - - - - - - - 0.994 - - KIAA1191 [Source:NCBI gene;Acc:416230]
30. RAB9A ENSGALG00000016579 3262 0.994 - - - - - - - 0.994 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
31. GOLGA1 ENSGALG00000001025 334 0.994 - - - - - - - 0.994 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
32. UTP20 ENSGALG00000011643 3012 0.994 - - - - - - - 0.994 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
33. ENSGALG00000012564 ENSGALG00000012564 426 0.994 - - - - - - - 0.994 - -
34. OXSR1 ENSGALG00000005979 2905 0.993 - - - - - - - 0.993 - - oxidative stress responsive 1
35. TMF1 ENSGALG00000013408 3344 0.993 - - - - - - - 0.993 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
36. RAB35 ENSGALG00000007308 6300 0.993 - - - - - - - 0.993 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
37. IRF2BPL ENSGALG00000041616 2835 0.993 - - - - - - - 0.993 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
38. RPP38 ENSGALG00000008794 1057 0.993 - - - - - - - 0.993 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
39. ITPR1 ENSGALG00000008294 1226 0.993 - - - - - - - 0.993 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
40. LPAR1 ENSGALG00000015729 3874 0.992 - - - - - - - 0.992 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
41. BFAR ENSGALG00000003111 1778 0.99 - - - - - - - 0.990 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
42. ATG13 ENSGALG00000008347 7374 0.99 - - - - - - - 0.990 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
43. TATDN1 ENSGALG00000041072 1585 0.99 - - - - - - - 0.990 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
44. DFFA ENSGALG00000002820 2046 0.99 - - - - - - - 0.990 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
45. HSBP1 ENSGALG00000043039 2365 0.989 - - - - - - - 0.989 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
46. JARID2 ENSGALG00000012702 4280 0.988 - - - - - - - 0.988 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
47. TMEM135 2283 0.987 - - - - - - - 0.987 - - transmembrane protein 135, transcript variant X4
48. TMEM168 ENSGALG00000009443 2452 0.987 - - - - - - - 0.987 - - transmembrane protein 168, transcript variant X1
49. BET1 ENSGALG00000024485 2451 0.987 - - - - - - - 0.987 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
50. GCN1L1 GCN1L1 4601 0.985 - - - - - - - 0.985 - -
51. WDFY1 ENSGALG00000005158 2512 0.985 - - - - - - - 0.985 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
52. KLF5 ENSGALG00000016927 1080 0.984 - - - - - - - 0.984 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
53. HSD17B2 ENSGALG00000005467 275 0.982 - - - - - - - 0.982 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
54. UBR2 ENSGALG00000009906 7717 0.981 - - - - - - - 0.981 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
55. SFRP2 ENSGALG00000009241 4716 0.98 - - - - - - - 0.980 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
56. COPG2 ENSGALG00000008144 4542 0.979 - - - - - - - 0.979 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
57. MGAT4B ENSGALG00000005924 2663 0.978 - - - - - - - 0.978 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
58. NFU1 ENSGALG00000030200 6882 0.977 - - - - - - - 0.977 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
59. CDC7 ENSGALG00000006051 3996 0.977 - - - - - - - 0.977 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
60. OSR2 ENSGALG00000037695 2010 0.977 - - - - - - - 0.977 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
61. PMPCB ENSGALG00000008280 6357 0.974 - - - - - - - 0.974 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
62. AFAP1L2 ENSGALG00000008999 1305 0.973 - - - - - - - 0.973 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
63. EMG1 ENSGALG00000014568 8102 0.973 - - - - - - - 0.973 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
64. MYBBP1A ENSGALG00000001363 10331 0.973 - - - - - - - 0.973 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
65. SIGMAR1 ENSGALG00000028996 12267 0.972 - - - - - - - 0.972 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
66. ACOT13 ENSGALG00000013632 5550 0.97 - - - - - - - 0.970 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
67. CDC23 ENSGALG00000007610 11945 0.969 - - - - - - - 0.969 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
68. AP3S1 ENSGALG00000002341 12388 0.965 - - - - - - - 0.965 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
69. HECTD1 ENSGALG00000009946 1946 0.962 - - - - - - - 0.962 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
70. TGS1 ENSGALG00000015340 5897 0.962 - - - - - - - 0.962 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
71. LYPD6B ENSGALG00000028759 831 0.956 - - - - - - - 0.956 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
72. WDR36 ENSGALG00000000247 11277 0.955 - - - - - - - 0.955 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
73. DDX47 ENSGALG00000011794 4255 0.955 - - - - - - - 0.955 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
74. LATS1 ENSGALG00000012386 3455 0.955 - - - - - - - 0.955 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
75. WDR11 ENSGALG00000035013 3393 0.954 - - - - - - - 0.954 - - WD repeat domain 11 [Source:HGNC Symbol;Acc:HGNC:13831]
76. CYP51A1 ENSGALG00000009365 6996 0.952 - - - - - - - 0.952 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
77. LMAN2 ENSGALG00000033232 11740 0.945 - - - - - - - 0.945 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
78. UPK3BL ENSGALG00000001885 1650 0.944 - - - - - - - 0.944 - - uroplakin 3B-like
79. BPTF ENSGALG00000038222 7521 0.944 - - - - - - - 0.944 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
80. DOCK7 6385 0.943 - - - - - - - 0.943 - - dedicator of cytokinesis 7, transcript variant X3
81. MRPS36 ENSGALG00000014789 7584 0.94 - - - - - - - 0.940 - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
82. HYAL1 ENSGALG00000000785 1778 0.935 - - - - - - 0.935 - - - hyaluronoglucosaminidase 1, transcript variant X3
83. BEND5 ENSGALG00000010505 3298 0.933 - - - - - - 0.933 - - - BEN domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25668]
84. MED30 ENSGALG00000030862 7163 0.932 - - - - - - - 0.932 - - mediator complex subunit 30 [Source:NCBI gene;Acc:420284]
85. PYCR1 ENSGALG00000007300 7987 0.931 - - - - - - 0.931 - - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
86. LYRM4 ENSGALG00000027339 2917 0.931 - - - - - - 0.931 - - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
87. SQSTM1 ENSGALG00000035804 2238 0.931 - - - - - - 0.931 - - - sequestosome 1 [Source:HGNC Symbol;Acc:HGNC:11280]
88. RPA1 ENSGALG00000003072 8023 0.929 - - - - - - - 0.929 - - replication protein A1 [Source:NCBI gene;Acc:417563]
89. LMO4 ENSGALG00000006252 3686 0.928 - - - - - - 0.928 - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
90. THOC3 ENSGALG00000024172 7617 0.928 - - - - - - 0.928 - - - THO complex 3 [Source:NCBI gene;Acc:416232]
91. PPIL2 ENSGALG00000042052 4349 0.927 - - - - - - 0.927 - - - peptidylprolyl isomerase like 2 [Source:NCBI gene;Acc:416775]
92. CLK3 ENSGALG00000001362 2171 0.926 - - - - - - 0.926 - - - CDC like kinase 3 [Source:NCBI gene;Acc:415295]
93. AP1S3 ENSGALG00000005171 2981 0.926 - - - - - - 0.926 - - - adaptor related protein complex 1 subunit sigma 3 [Source:NCBI gene;Acc:424807]
94. ANXA11 ENSGALG00000043826 5189 0.925 - - - - - - 0.925 - - - annexin A11 [Source:NCBI gene;Acc:423637]
95. TNFRSF11B ENSGALG00000043167 911 0.923 - - - - - - 0.923 - - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
96. FAM162A ENSGALG00000007378 8290 0.917 - - - - - - - 0.917 - - family with sequence similarity 162 member A [Source:HGNC Symbol;Acc:HGNC:17865]
97. C7orf55 C7orf55 7083 0.917 - - - - - - 0.917 - - -
98. TAF1B ENSGALG00000016437 2318 0.916 - - - - - - 0.916 - - - TATA-box binding protein associated factor, RNA polymerase I subunit B [Source:NCBI gene;Acc:421933]
99. CLASP1 ENSGALG00000011645 1378 0.915 - - - - - - 0.915 - - - cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]
100. ARHGEF3 ENSGALG00000005481 683 0.915 - - - - - - 0.915 - - - Rho guanine nucleotide exchange factor 3 [Source:NCBI gene;Acc:416000]

There are 296 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA