Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP20

Gene Name Gene ID Reads Annotation
USP20 ENSGALG00000041104 3186 ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]











Genes with expression patterns similar to USP20

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP20 ENSGALG00000041104 3186 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
2. ROR1 ENSGALG00000011019 2155 1.815 - - - - - - 0.825 0.990 - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
3. SEC22B ENSGALG00000039704 16080 1.78 - - - - - - 0.805 0.975 - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
4. RBM19 ENSGALG00000008289 10702 1.53 - - - - - - 0.779 0.751 - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
5. TUBA4A ENSGALG00000000433 1367 1.491 - - - - - - 0.760 - - 0.731 tubulin alpha 4a
6. NT5C3A ENSGALG00000031397 6667 1.491 - - - - - - 0.705 0.786 - - 5'-nucleotidase, cytosolic IIIA [Source:NCBI gene;Acc:395080]
7. ALDH4A1 ENSGALG00000042184 9432 0.994 - - - - - - - 0.994 - - aldehyde dehydrogenase 4 family member A1 [Source:NCBI gene;Acc:419467]
8. RAD18 ENSGALG00000008368 7214 0.992 - - - - - - - 0.992 - - RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
9. XPNPEP3 ENSGALG00000012003 2253 0.992 - - - - - - - 0.992 - - X-prolyl aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:28052]
10. ENSGALG00000023314 ENSGALG00000023314 6331 0.992 - - - - - - - 0.992 - -
11. OGG1 ENSGALG00000006651 1320 0.992 - - - - - - - 0.992 - - 8-oxoguanine DNA glycosylase [Source:NCBI gene;Acc:771001]
12. MAMLD1 ENSGALG00000009098 1231 0.992 - - - - - - - 0.992 - - mastermind like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:2568]
13. H1F0 ENSGALG00000044240 1206 0.992 - - - - - - - 0.992 - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
14. MYL2 ENSGALG00000004582 2245 0.992 - - - - - - - 0.992 - - myosin, light chain 2, regulatory, cardiac, slow [Source:NCBI gene;Acc:416874]
15. XRCC2 ENSGALG00000026865 2214 0.992 - - - - - - - 0.992 - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
16. SORD ENSGALG00000031408 2119 0.992 - - - - - - - 0.992 - - sorbitol dehydrogenase [Source:NCBI gene;Acc:415332]
17. CDC26 ENSGALG00000026095 3491 0.992 - - - - - - - 0.992 - - cell division cycle 26 [Source:NCBI gene;Acc:417269]
18. RNF19A ENSGALG00000038772 380 0.992 - - - - - - - 0.992 - - ring finger protein 19A, RBR E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13432]
19. GPR180 ENSGALG00000016897 1545 0.992 - - - - - - - 0.992 - - G protein-coupled receptor 180 [Source:HGNC Symbol;Acc:HGNC:28899]
20. UBE4A ENSGALG00000031134 5851 0.991 - - - - - - - 0.991 - - ubiquitination factor E4A [Source:NCBI gene;Acc:419758]
21. ARL6IP4 ENSGALG00000003682 2467 0.991 - - - - - - - 0.991 - - ADP ribosylation factor like GTPase 6 interacting protein 4 [Source:HGNC Symbol;Acc:HGNC:18076]
22. PHKG1 ENSGALG00000002485 15214 0.991 - - - - - - - 0.991 - - phosphorylase kinase catalytic subunit gamma 1 [Source:NCBI gene;Acc:417543]
23. EDEM2 ENSGALG00000003128 3338 0.991 - - - - - - - 0.991 - - ER degradation enhancing alpha-mannosidase like protein 2 [Source:HGNC Symbol;Acc:HGNC:15877]
24. CDCA2 ENSGALG00000045842 2236 0.991 - - - - - - - 0.991 - - cell division cycle associated 2, transcript variant X3
25. RNF2 ENSGALG00000037219 2299 0.991 - - - - - - - 0.991 - - ring finger protein 2 [Source:HGNC Symbol;Acc:HGNC:10061]
26. FOPNL ENSGALG00000006532 2922 0.991 - - - - - - - 0.991 - - FGFR1OP N-terminal like [Source:NCBI gene;Acc:416598]
27. MPP7 ENSGALG00000007408 2485 0.99 - - - - - - - 0.990 - - membrane palmitoylated protein 7 [Source:HGNC Symbol;Acc:HGNC:26542]
28. EMCN EMCN 2637 0.99 - - - - - - - 0.990 - -
29. NARG2 NARG2 2294 0.989 - - - - - - - 0.989 - -
30. ENSGALG00000027854 ENSGALG00000027854 5007 0.989 - - - - - - - 0.989 - -
31. RASSF2 ENSGALG00000030432 4822 0.989 - - - - - - - 0.989 - - Ras association domain family member 2 [Source:NCBI gene;Acc:419521]
32. TWISTNB ENSGALG00000010863 7563 0.987 - - - - - - - 0.987 - - TWIST neighbor [Source:NCBI gene;Acc:420603]
33. ODF2 ENSGALG00000004767 3972 0.987 - - - - - - - 0.987 - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
34. CCDC12 ENSGALG00000005487 8190 0.987 - - - - - - - 0.987 - - coiled-coil domain containing 12 [Source:NCBI gene;Acc:420402]
35. RBM27 ENSGALG00000007516 3909 0.984 - - - - - - - 0.984 - - RNA binding motif protein 27, transcript variant X3
36. TSPO2 ENSGALG00000003212 5141 0.983 - - - - - - - 0.983 - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
37. C1H12ORF23 C1H12ORF23 13234 0.979 - - - - - - - 0.979 - -
38. HSPA14 ENSGALG00000035201 7372 0.979 - - - - - - - 0.979 - - heat shock protein family A (Hsp70) member 14
39. TRABD ENSGALG00000030705 6577 0.977 - - - - - - - 0.977 - - TraB domain containing [Source:NCBI gene;Acc:417746]
40. C26H6ORF125 ENSGALG00000002881 15827 0.966 - - - - - - - 0.966 - - chromosome 26 open reading frame, human C6orf125 [Source:NCBI gene;Acc:419909]
41. CZH9ORF100 CZH9ORF100 4268 0.966 - - - - - - - 0.966 - -
42. MTFR1 ENSGALG00000038385 9419 0.966 - - - - - - - 0.966 - - mitochondrial fission regulator 1 [Source:NCBI gene;Acc:395222]
43. WDR53 ENSGALG00000006395 4938 0.965 - - - - - - - 0.965 - - WD repeat domain 53 [Source:HGNC Symbol;Acc:HGNC:28786]
44. KCTD2 ENSGALG00000007934 15085 0.965 - - - - - - - 0.965 - - potassium channel tetramerization domain containing 2 [Source:NCBI gene;Acc:422116]
45. PPIF ENSGALG00000004809 5586 0.963 - - - - - - - 0.963 - - peptidylprolyl isomerase F [Source:NCBI gene;Acc:423723]
46. GTF2B ENSGALG00000006205 6950 0.961 - - - - - - - 0.961 - - general transcription factor IIB [Source:HGNC Symbol;Acc:HGNC:4648]
47. SNF8 ENSGALG00000001309 7398 0.955 - - - - - - - 0.955 - - SNF8, ESCRT-II complex subunit [Source:HGNC Symbol;Acc:HGNC:17028]
48. HSF2BP ENSGALG00000016202 1696 0.95 - - - - - - - 0.950 - - heat shock transcription factor 2 binding protein [Source:HGNC Symbol;Acc:HGNC:5226]
49. SOD2 ENSGALG00000011661 13178 0.947 - - - - - - - 0.947 - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
50. SAR1A ENSGALG00000004431 28833 0.946 - - - - - - - 0.946 - - secretion associated Ras related GTPase 1A [Source:HGNC Symbol;Acc:HGNC:10534]
51. NIPSNAP3L ENSGALG00000027334 7514 0.939 - - - - - - - 0.939 - - nipsnap homolog 3-like
52. ANXA11 ENSGALG00000043826 5189 0.927 - - - - - - - 0.927 - - annexin A11 [Source:NCBI gene;Acc:423637]
53. WDR43 ENSGALG00000032529 12235 0.927 - - - - - - - 0.927 - - WD repeat domain 43 [Source:NCBI gene;Acc:421295]
54. TMEM183A ENSGALG00000000223 6915 0.923 - - - - - - - 0.923 - - transmembrane protein 183A [Source:NCBI gene;Acc:421156]
55. GTF2E1 ENSGALG00000042320 7712 0.918 - - - - - - - 0.918 - - general transcription factor IIE subunit 1 [Source:HGNC Symbol;Acc:HGNC:4650]
56. SLC27A4 ENSGALG00000004965 3278 0.912 - - - - - - - 0.912 - - solute carrier family 27 member 4 [Source:HGNC Symbol;Acc:HGNC:10998]
57. CCDC93 ENSGALG00000012129 2405 0.911 - - - - - - - 0.911 - - coiled-coil domain containing 93 [Source:NCBI gene;Acc:424277]
58. PLOD2 ENSGALG00000006783 22789 0.909 - - - - - - - 0.909 - - procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]
59. RAB2A ENSGALG00000015450 990 0.904 - - - - - - - 0.904 - - RAB2A, member RAS oncogene family [Source:NCBI gene;Acc:396153]
60. CHERP ENSGALG00000003824 11489 0.904 - - - - - - - 0.904 - - calcium homeostasis endoplasmic reticulum protein [Source:NCBI gene;Acc:420144]
61. STX7 ENSGALG00000034374 4695 0.902 - - - - - - - 0.902 - - syntaxin 7 [Source:NCBI gene;Acc:426930]
62. DNAJC12 ENSGALG00000002769 1418 0.901 - - - - - - 0.901 - - - DnaJ heat shock protein family (Hsp40) member C12 [Source:NCBI gene;Acc:423647]
63. THG1L ENSGALG00000003722 7497 0.901 - - - - - - - 0.901 - - tRNA-histidine guanylyltransferase 1 like [Source:NCBI gene;Acc:416242]
64. MLYCD ENSGALG00000005494 1882 0.9 - - - - - - - 0.900 - - malonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]
65. EIF2B3 ENSGALG00000010140 7992 0.898 - - - - - - - 0.898 - - eukaryotic translation initiation factor 2B subunit gamma [Source:NCBI gene;Acc:424587]
66. BMI1 ENSGALG00000041267 6618 0.894 - - - - - - 0.894 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
67. PAPD7 ENSGALG00000013061 2031 0.893 - - - - - - 0.893 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
68. HERC2 ENSGALG00000016739 9900 0.893 - - - - - - - 0.893 - - HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:418682]
69. WIPI1 ENSGALG00000004215 3359 0.886 - - - - - - 0.886 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
70. LONP1 ENSGALG00000040492 7133 0.884 - - - - - - 0.884 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
71. CCNL1 ENSGALG00000009699 1033 0.88 - - - - - - 0.880 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
72. SPG11 ENSGALG00000008180 1890 0.877 - - - - - - 0.877 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
73. PARL ENSGALG00000002315 15943 0.877 - - - - - - 0.877 - - - presenilin associated rhomboid like
74. DPYSL3 ENSGALG00000007582 7743 0.877 - - - - - - 0.877 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
75. COPS8 ENSGALG00000033385 10166 0.876 - - - - - - 0.876 - - - COP9 signalosome subunit 8 [Source:NCBI gene;Acc:424020]
76. SPAG9 ENSGALG00000034001 2314 0.876 - - - - - - 0.876 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
77. NEK4 ENSGALG00000041428 4473 0.875 - - - - - - 0.875 - - - NIMA related kinase 4 [Source:HGNC Symbol;Acc:HGNC:11399]
78. NUP62 ENSGALG00000004856 5799 0.873 - - - - - - - 0.873 - - nucleoporin 62
79. NT5C2 ENSGALG00000008179 1760 0.872 - - - - - - 0.872 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
80. MBTPS1 ENSGALG00000003293 4843 0.872 - - - - - - 0.872 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
81. NEFM ENSGALG00000000317 6992 0.87 - - - - - - 0.870 - - - neurofilament medium [Source:NCBI gene;Acc:396206]
82. LPAR1 ENSGALG00000015729 3874 0.87 - - - - - - 0.870 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
83. SUN1 ENSGALG00000003781 3442 0.869 - - - - - - 0.869 - - - Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
84. SLC35F1 ENSGALG00000029011 14728 0.868 - - - - - - - 0.868 - - solute carrier family 35 member F1 [Source:HGNC Symbol;Acc:HGNC:21483]
85. CDC73 ENSGALG00000002469 4586 0.867 - - - - - - 0.867 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
86. ZCCHC2 ENSGALG00000012889 3163 0.867 - - - - - - 0.867 - - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
87. DCLK2 ENSGALG00000032386 2253 0.866 - - - - - - 0.866 - - - doublecortin like kinase 2 [Source:HGNC Symbol;Acc:HGNC:19002]
88. NCAPG2 ENSGALG00000006525 2319 0.864 - - - - - - 0.864 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
89. SRP72 ENSGALG00000011403 13666 0.864 - - - - - - 0.864 - - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
90. CCNE2 ENSGALG00000040794 1229 0.862 - - - - - - 0.862 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
91. RCAN3 ENSGALG00000004282 7778 0.86 - - - - - - 0.860 - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
92. MPST ENSGALG00000040840 2122 0.86 - - - - - - 0.860 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
93. IK ENSGALG00000037172 12100 0.86 - - - - - - 0.860 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
94. FAM193A ENSGALG00000015667 3075 0.857 - - - - - - 0.857 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
95. URM1 ENSGALG00000004971 17880 0.856 - - - - - - 0.856 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
96. FAM57A ENSGALG00000004820 1492 0.856 - - - - - - 0.856 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
97. FTSJ2 FTSJ2 2951 0.856 - - - - - - 0.856 - - -
98. ENSGALG00000028164 ENSGALG00000028164 3325 0.855 - - - - - - 0.855 - - -
99. C14orf80 C14orf80 1921 0.854 - - - - - - 0.854 - - -
100. PEX16 ENSGALG00000008421 3684 0.854 - - - - - - 0.854 - - - peroxisomal biogenesis factor 16 [Source:HGNC Symbol;Acc:HGNC:8857]

There are 283 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA