Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USP13

Gene Name Gene ID Reads Annotation
USP13 ENSGALG00000008909 8 ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]











Genes with expression patterns similar to USP13

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USP13 ENSGALG00000008909 8 4 - - 1.000 - - 1.000 - 1.000 - 1.000 ubiquitin specific peptidase 13 (isopeptidase T-3) [Source:NCBI gene;Acc:429286]
2. CIP1 CIP1 44 1.632 - - - - - - - 0.910 - 0.722
3. ISLR ENSGALG00000021525 142 1 - - - - - - - 1.000 - - immunoglobulin superfamily containing leucine rich repeat [Source:HGNC Symbol;Acc:HGNC:6133]
4. TMEM67 ENSGALG00000029287 2 1 - - - - - - - 1.000 - - transmembrane protein 67, transcript variant X2
5. NEUROD6 1 1 - - - - - - - 1.000 - - neuronal differentiation 6, transcript variant X1
6. KMO ENSGALG00000007503 7 1 - - - - - - - 1.000 - - kynurenine 3-monooxygenase [Source:HGNC Symbol;Acc:HGNC:6381]
7. LYG2 ENSGALG00000016761 7 1 - - - - - - - 1.000 - - lysozyme g2 [Source:NCBI gene;Acc:395708]
8. ANGPTL5 ENSGALG00000017191 2 1 - - - - - - - 1.000 - - angiopoietin like 5 [Source:NCBI gene;Acc:772036]
9. AANAT ENSGALG00000001955 23 1 - - - - - - - 1.000 - - aralkylamine N-acetyltransferase [Source:NCBI gene;Acc:396066]
10. ENSGALG00000026863 ENSGALG00000026863 1 1 - - - - - - - 1.000 - -
11. GSS ENSGALG00000003281 57 1 - - - - - - - 1.000 - - glutathione synthetase [Source:HGNC Symbol;Acc:HGNC:4624]
12. ZBTB6 ENSGALG00000021570 15 1 - - - - - - - 1.000 - - zinc finger and BTB domain containing 6 [Source:NCBI gene;Acc:417108]
13. TBC1D20 ENSGALG00000006201 6 1 - - - - - - - 1.000 - - TBC1 domain family member 20 [Source:HGNC Symbol;Acc:HGNC:16133]
14. ENSGALG00000008309 ENSGALG00000008309 7 1 - - - - - - - 1.000 - -
15. NEK9 ENSGALG00000010314 6 1 - - - - - - - 1.000 - - NIMA related kinase 9 [Source:HGNC Symbol;Acc:HGNC:18591]
16. JMJD4 ENSGALG00000005417 10 0.997 - - - - - - - 0.997 - - jumonji domain containing 4 [Source:NCBI gene;Acc:420400]
17. GPRIN2 ENSGALG00000002048 17 0.997 - - - - - - - 0.997 - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
18. GAL7 GAL7 92 0.987 - - - - - - - 0.987 - -
19. SGK2 ENSGALG00000003537 26 0.97 - - - - - - - 0.970 - - SGK2, serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:13900]
20. IL10R2 IL10R2 72 0.964 - - - - - - - 0.964 - -
21. BAP1 ENSGALG00000004366 12 0.957 - - - - - - - 0.957 - - BRCA1 associated protein 1 [Source:NCBI gene;Acc:415944]
22. NDST3 22 0.957 - - - - - - - 0.957 - - N-deacetylase and N-sulfotransferase 3, transcript variant X11
23. C16orf62 C16orf62 316 0.955 - - - - - - - 0.955 - -
24. KCND2 ENSGALG00000009066, ENSGALG00000043515 63 0.947 - - - - - - - 0.947 - - potassium voltage-gated channel subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:6238]
25. SPHKAP ENSGALG00000002974 80 0.946 - - - - - - - 0.946 - - SPHK1 interactor, AKAP domain containing [Source:NCBI gene;Acc:424789]
26. KCTD3 ENSGALG00000009678 335 0.944 - - - - - - - 0.944 - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
27. CAPN2 ENSGALG00000009360 8 0.935 - - - - - 0.935 - - - - calpain 2 [Source:NCBI gene;Acc:395963]
28. TTC28 ENSGALG00000005676 36 0.934 - - - - - - - 0.934 - - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
29. ENSGALG00000021884 ENSGALG00000021884 29 0.934 - - - - - - - 0.934 - -
30. ARHGAP10 ENSGALG00000010031 31 0.932 - - - - - - - 0.932 - - Rho GTPase activating protein 10 [Source:HGNC Symbol;Acc:HGNC:26099]
31. ABCA8 ENSGALG00000021399 11 0.932 - - - - - - - - - 0.932 ATP binding cassette subfamily A member 8
32. APPL1 ENSGALG00000005527 104 0.93 - - - - - - - 0.930 - - adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 [Source:HGNC Symbol;Acc:HGNC:24035]
33. LOC396365 ENSGALG00000027219 7 0.92 - - - - - - - 0.920 - - preprogastrin
34. ENSGALG00000010590 ENSGALG00000010590 6 0.91 - - - - - - - - - 0.910
35. ADAMTSL3 ENSGALG00000006104 57 0.899 - - - - - - - 0.899 - - ADAMTS like 3 [Source:HGNC Symbol;Acc:HGNC:14633]
36. ENSGALG00000024437 ENSGALG00000024437 73 0.896 - - - - - - - 0.896 - -
37. LOC422320 ENSGALG00000007703 6 0.89 - - - - - - - 0.890 - - ligand of Numb protein X 2-like, transcript variant X1
38. FZD1 ENSGALG00000009064 76 0.888 - - - - - - - 0.888 - - frizzled class receptor 1 [Source:NCBI gene;Acc:374062]
39. GP130 GP130 42 0.888 - - - - - 0.888 - - - -
40. CHFR ENSGALG00000002180 17 0.888 - - - - - 0.888 - - - - checkpoint with forkhead and ring finger domains [Source:HGNC Symbol;Acc:HGNC:20455]
41. IRF-3 IRF-3 129 0.885 - - - - - - - - - 0.885
42. ENSGALG00000013101 ENSGALG00000013101 49 0.885 - - - - - - - 0.885 - -
43. GPR144 GPR144 30 0.881 - - - - - - - - - 0.881
44. LYZ ENSGALG00000009963 28 0.878 - - - - - - - 0.878 - - lysozyme (renal amyloidosis) [Source:NCBI gene;Acc:396218]
45. gga-mir-6703 ENSGALG00000029026 124 0.877 - - 0.877 - - - - - - - gga-mir-6703 [Source:miRBase;Acc:MI0022525]
46. IQCA1 ENSGALG00000003980 87 0.866 - - - - - - - 0.866 - - IQ motif containing with AAA domain 1 [Source:HGNC Symbol;Acc:HGNC:26195]
47. TTC36 ENSGALG00000006812 63 0.866 - - - - - 0.866 - - - - tetratricopeptide repeat domain 36 [Source:NCBI gene;Acc:419757]
48. SYT15 ENSGALG00000002046 3 0.86 - - - - - - - - - 0.860 synaptotagmin 15, transcript variant X1
49. P2RY4 ENSGALG00000004346 11 0.854 - - - - - - - 0.854 - - pyrimidinergic receptor P2Y4 [Source:HGNC Symbol;Acc:HGNC:8542]
50. PLEKHA1 ENSGALG00000034548 34 0.848 - - - - - - - 0.848 - - pleckstrin homology domain containing A1 [Source:HGNC Symbol;Acc:HGNC:14335]
51. IL1RAPL1 ENSGALG00000016288 102 0.848 - - - - - - - 0.848 - - interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]
52. CARD11 ENSGALG00000004398 58 0.845 - - - - - - - 0.845 - - caspase recruitment domain family member 11 [Source:NCBI gene;Acc:416476]
53. ENSGALG00000011129 ENSGALG00000011129 3 0.841 - - 0.841 - - - - - - -
54. LZTS2 ENSGALG00000023612 9 0.84 - - - - - 0.840 - - - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
55. CKV6.3 CKV6.3 13 0.836 - - - - - 0.836 - - - -
56. TTC18 TTC18 139 0.832 - - - - - - - - - 0.832
57. TGM4 ENSGALG00000033171 19 0.826 - - - - - 0.826 - - - - transglutaminase 4 [Source:NCBI gene;Acc:420706]
58. TRIM2 ENSGALG00000009207 44 0.826 - - - - - 0.826 - - - - tripartite motif containing 2 [Source:NCBI gene;Acc:100857562]
59. BRF2 ENSGALG00000003124 1 0.826 - - - - - 0.826 - - - - BRF2, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:17298]
60. ENSGALG00000027637 ENSGALG00000027637 7 0.826 - - - - - 0.826 - - - -
61. SRD5A1 ENSGALG00000013063 1 0.826 - - - - - 0.826 - - - - steroid 5 alpha-reductase 1 [Source:HGNC Symbol;Acc:HGNC:11284]
62. ENSGALG00000024319 ENSGALG00000024319 2 0.826 - - - - - 0.826 - - - -
63. LOC423752 ENSGALG00000020899 17 0.826 - - - - - 0.826 - - - - uncharacterized LOC423752, transcript variant X1
64. ABCF3 ENSGALG00000008480 974 0.826 - - - - - 0.826 - - - - ATP binding cassette subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:72]
65. ENSGALG00000028222 ENSGALG00000028222 44 0.826 - - - - - 0.826 - - - -
66. MESP2_1 ENSGALG00000008275 1 0.826 - - - - - 0.826 - - - - mesoderm posterior bHLH transcription factor 2
67. MBL2 ENSGALG00000002507 17 0.826 - - - - - 0.826 - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
68. ADTRP ENSGALG00000032683 66 0.826 - - - - - 0.826 - - - - androgen dependent TFPI regulating protein [Source:HGNC Symbol;Acc:HGNC:21214]
69. CALCRL ENSGALG00000002632 4 0.826 - - - - - 0.826 - - - - calcitonin receptor like receptor [Source:NCBI gene;Acc:423990]
70. EPB41L5 ENSGALG00000011605 18 0.826 - - - - - 0.826 - - - - erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]
71. EPGN ENSGALG00000010859 187 0.826 - - - - - 0.826 - - - - epithelial mitogen [Source:NCBI gene;Acc:497270]
72. DOK4 ENSGALG00000001160 2 0.826 - - - - - 0.826 - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
73. HORMAD2 ENSGALG00000008037 1 0.826 - - - - - 0.826 - - - - HORMA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28383]
74. CITED2 ENSGALG00000013818 4 0.826 - - - - - 0.826 - - - - Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 [Source:NCBI gene;Acc:395399]
75. HTR3A ENSGALG00000007004 7 0.826 - - - - - 0.826 - - - - 5-hydroxytryptamine receptor 3A [Source:HGNC Symbol;Acc:HGNC:5297]
76. ZP2 ENSGALG00000002428 10 0.826 - - - - - 0.826 - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
77. ENSGALG00000019667 ENSGALG00000019667 16 0.826 - - - - - 0.826 - - - -
78. ZHX2 ENSGALG00000043827 13 0.826 - - - - - 0.826 - - - - zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:HGNC:18513]
79. WWOX ENSGALG00000005377 0 0.826 - - - - - 0.826 - - - - WW domain containing oxidoreductase [Source:NCBI gene;Acc:415801]
80. ENSGALG00000020592 ENSGALG00000020592 2 0.826 - - - - - 0.826 - - - -
81. C2CD2L ENSGALG00000034014 2 0.826 - - - - - 0.826 - - - - C2CD2 like [Source:NCBI gene;Acc:428233]
82. U6_1 U6_1 3 0.826 - - - - - 0.826 - - - -
83. TMEM63C ENSGALG00000010406 1 0.826 - - - - - 0.826 - - - - transmembrane protein 63C [Source:HGNC Symbol;Acc:HGNC:23787]
84. GFAP ENSGALG00000000909 21 0.826 - - - - - 0.826 - - - - glial fibrillary acidic protein [Source:HGNC Symbol;Acc:HGNC:4235]
85. DLX1 ENSGALG00000018439 16 0.826 - - - - - 0.826 - - - - distal-less homeobox 1 [Source:NCBI gene;Acc:429283]
86. CLIP4 ENSGALG00000009024 4 0.826 - - - - - 0.826 - - - - CAP-Gly domain containing linker protein family member 4 [Source:HGNC Symbol;Acc:HGNC:26108]
87. gga-mir-3064 ENSGALG00000027517 1 0.826 - - - - - 0.826 - - - - gga-mir-3064 [Source:miRBase;Acc:MI0022380]
88. PIT-1 PIT-1 8 0.826 - - - - - 0.826 - - - -
89. GLDN ENSGALG00000013293 1 0.826 - - - - - 0.826 - - - - gliomedin [Source:HGNC Symbol;Acc:HGNC:29514]
90. CXorf22 CXorf22 20 0.826 - - - - - 0.826 - - - -
91. GUCA1A ENSGALG00000001431 6 0.826 - - - - - 0.826 - - - - guanylate cyclase activator 1A [Source:NCBI gene;Acc:374216]
92. NTN1 ENSGALG00000023626 12 0.824 - - - - - - - - - 0.824 netrin 1 [Source:NCBI gene;Acc:396389]
93. ENSGALG00000023100 ENSGALG00000023100 12 0.824 - - - - - - - 0.824 - -
94. ENSGALG00000002522 ENSGALG00000002522 21 0.82 - - 0.820 - - - - - - -
95. CTNND1 ENSGALG00000007330 53 0.819 - - - - - - - 0.819 - - catenin delta 1 [Source:HGNC Symbol;Acc:HGNC:2515]
96. UBE4B ENSGALG00000002649 39 0.817 - - - - - - - 0.817 - - ubiquitination factor E4B [Source:HGNC Symbol;Acc:HGNC:12500]
97. PLS1 ENSGALG00000002647 53 0.814 - - - - - - - - - 0.814 plastin 1 [Source:NCBI gene;Acc:396291]
98. PLEKHA8 ENSGALG00000011185 101 0.811 - - - - - - - 0.811 - - pleckstrin homology domain containing A8 [Source:HGNC Symbol;Acc:HGNC:30037]
99. NR5A1 ENSGALG00000001080 141 0.81 - - - - - 0.810 - - - - nuclear receptor subfamily 5 group A member 1 [Source:NCBI gene;Acc:395960]
100. RGS7 ENSGALG00000039772 69 0.799 - - - - - 0.799 - - - - regulator of G-protein signaling 7 [Source:NCBI gene;Acc:395620]

There are 71 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA