Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Human data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USP11

Gene Name Gene ID Reads Annotation
USP11 ENSG00000102226 8177 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]



Genes with expression patterns similar to USP11

Nr. Gene Name Gene ID Reads Σ scores 35d slice1 35d slice2 Annotation
1. USP11 ENSG00000102226 8177 2 1.000 1.000 ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]
2. ATP5SL 25967 0.876 - 0.876 ATP5S like, transcript variant X1
3. PPME1 ENSG00000214517 4946 0.875 - 0.875 protein phosphatase methylesterase 1 [Source:HGNC Symbol;Acc:HGNC:30178]
4. UBA1 ENSG00000130985 20298 0.862 - 0.862 ubiquitin like modifier activating enzyme 1 [Source:HGNC Symbol;Acc:HGNC:12469]
5. DCTN1 ENSG00000204843 19815 0.861 - 0.861 dynactin subunit 1 [Source:HGNC Symbol;Acc:HGNC:2711]
6. GPS2 ENSG00000132522 22685 0.857 - 0.857 G protein pathway suppressor 2 [Source:HGNC Symbol;Acc:HGNC:4550]
7. EEF2 ENSG00000167658 47680 0.855 - 0.855 eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:HGNC:3214]
8. MED24 ENSG00000008838 7251 0.85 - 0.850 mediator complex subunit 24 [Source:HGNC Symbol;Acc:HGNC:22963]
9. HSP90AB1 ENSG00000096384 183977 0.847 - 0.847 heat shock protein 90 alpha family class B member 1 [Source:HGNC Symbol;Acc:HGNC:5258]
10. CSNK2B ENSG00000204435, ENSG00000206406, ENSG00000224398, ENSG00000224774, ENSG00000228875, ENSG00000230700, ENSG00000232960 15233 0.841 - 0.841 casein kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:2460]
11. ATP6V0C ENSG00000185883 26903 0.841 - 0.841 ATPase H+ transporting V0 subunit c [Source:HGNC Symbol;Acc:HGNC:855]
12. MARCKSL1 ENSG00000175130 73054 0.833 - 0.833 MARCKS like 1 [Source:HGNC Symbol;Acc:HGNC:7142]
13. CTDNEP1 ENSG00000175826 15483 0.83 - 0.830 CTD nuclear envelope phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:19085]
14. MLF2 ENSG00000089693 18042 0.829 - 0.829 myeloid leukemia factor 2 [Source:HGNC Symbol;Acc:HGNC:7126]
15. TRIM28 ENSG00000130726 33518 0.825 - 0.825 tripartite motif containing 28 [Source:HGNC Symbol;Acc:HGNC:16384]
16. USP22 ENSG00000124422 49599 0.825 - 0.825 ubiquitin specific peptidase 22 [Source:HGNC Symbol;Acc:HGNC:12621]
17. ALG3 ENSG00000214160 8221 0.821 - 0.821 ALG3, alpha-1,3- mannosyltransferase [Source:HGNC Symbol;Acc:HGNC:23056]
18. DBN1 ENSG00000113758 12842 0.819 - 0.819 drebrin 1 [Source:HGNC Symbol;Acc:HGNC:2695]
19. CDK16 ENSG00000102225 4372 0.816 - 0.816 cyclin dependent kinase 16 [Source:HGNC Symbol;Acc:HGNC:8749]
20. STRN4 ENSG00000090372 7212 0.812 - 0.812 striatin 4 [Source:HGNC Symbol;Acc:HGNC:15721]
21. SNRPA ENSG00000077312 4577 0.812 - 0.812 small nuclear ribonucleoprotein polypeptide A [Source:HGNC Symbol;Acc:HGNC:11151]
22. PSME3 ENSG00000131467 10433 0.811 - 0.811 proteasome activator subunit 3 [Source:HGNC Symbol;Acc:HGNC:9570]
23. TBCB ENSG00000105254 27421 0.81 - 0.810 tubulin folding cofactor B [Source:HGNC Symbol;Acc:HGNC:1989]
24. TNPO2 ENSG00000105576 7612 0.81 - 0.810 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
25. SRRT ENSG00000087087 9730 0.805 - 0.805 serrate, RNA effector molecule [Source:HGNC Symbol;Acc:HGNC:24101]
26. CAPNS1 ENSG00000126247 60832 0.805 - 0.805 calpain small subunit 1 [Source:HGNC Symbol;Acc:HGNC:1481]
27. SMARCA4 ENSG00000127616 21398 0.803 - 0.803 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
28. FUS ENSG00000089280 23952 0.803 - 0.803 FUS RNA binding protein [Source:HGNC Symbol;Acc:HGNC:4010]
29. FOXRED2 ENSG00000100350 5176 0.803 - 0.803 FAD dependent oxidoreductase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:26264]
30. RHBDD2 ENSG00000005486 6577 0.801 - 0.801 rhomboid domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23082]
31. SH3BGRL3 ENSG00000142669 26565 0.8 - 0.800 SH3 domain binding glutamate rich protein like 3 [Source:HGNC Symbol;Acc:HGNC:15568]
32. SAFB ENSG00000160633 7035 0.799 - 0.799 scaffold attachment factor B [Source:HGNC Symbol;Acc:HGNC:10520]
33. FAM213B 13531 0.798 - 0.798 family with sequence similarity 213 member B, transcript variant X4
34. HDGF ENSG00000143321 18626 0.798 - 0.798 heparin binding growth factor [Source:HGNC Symbol;Acc:HGNC:4856]
35. SRM ENSG00000116649 8533 0.797 - 0.797 spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
36. CS ENSG00000062485 8243 0.797 - 0.797 citrate synthase [Source:HGNC Symbol;Acc:HGNC:2422]
37. FAM127B 11371 0.797 - 0.797 family with sequence similarity 127 member B, transcript variant 2
38. TAF15 ENSG00000270647, ENSG00000276833 10005 0.796 - 0.796 TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]
39. PDAP1 ENSG00000106244 8971 0.796 - 0.796 PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
40. SF3B3 ENSG00000189091 8156 0.795 - 0.795 splicing factor 3b subunit 3 [Source:HGNC Symbol;Acc:HGNC:10770]
41. BANF1 ENSG00000175334 19847 0.795 - 0.795 barrier to autointegration factor 1 [Source:HGNC Symbol;Acc:HGNC:17397]
42. PSMF1 ENSG00000125818 7090 0.795 - 0.795 proteasome inhibitor subunit 1 [Source:HGNC Symbol;Acc:HGNC:9571]
43. DNMT1 ENSG00000130816 23001 0.795 - 0.795 DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]
44. OTUB1 ENSG00000167770 22747 0.792 - 0.792 OTU deubiquitinase, ubiquitin aldehyde binding 1 [Source:HGNC Symbol;Acc:HGNC:23077]
45. HCFC1 ENSG00000172534 21012 0.792 - 0.792 host cell factor C1 [Source:HGNC Symbol;Acc:HGNC:4839]
46. ERGIC3 ENSG00000125991 8782 0.791 - 0.791 ERGIC and golgi 3 [Source:HGNC Symbol;Acc:HGNC:15927]
47. KHSRP ENSG00000088247 13538 0.79 - 0.790 KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:HGNC:6316]
48. EHMT2 ENSG00000204371, ENSG00000206376, ENSG00000224143, ENSG00000227333, ENSG00000232045, ENSG00000236759, ENSG00000238134 6990 0.788 - 0.788 euchromatic histone lysine methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:14129]
49. U2AF2 ENSG00000063244 19476 0.786 - 0.786 U2 small nuclear RNA auxiliary factor 2 [Source:HGNC Symbol;Acc:HGNC:23156]
50. UBE2I ENSG00000103275 13271 0.786 - 0.786 ubiquitin conjugating enzyme E2 I [Source:HGNC Symbol;Acc:HGNC:12485]
51. ACTR1A ENSG00000138107 7033 0.785 - 0.785 ARP1 actin related protein 1 homolog A [Source:HGNC Symbol;Acc:HGNC:167]
52. PKM ENSG00000067225 58854 0.784 - 0.784 pyruvate kinase M1/2 [Source:HGNC Symbol;Acc:HGNC:9021]
53. SNRNP70 ENSG00000104852 14118 0.781 - 0.781 small nuclear ribonucleoprotein U1 subunit 70 [Source:HGNC Symbol;Acc:HGNC:11150]
54. HNRNPUL1 ENSG00000105323 23988 0.78 - 0.780 heterogeneous nuclear ribonucleoprotein U like 1 [Source:HGNC Symbol;Acc:HGNC:17011]
55. CUTA ENSG00000112514, ENSG00000226492 17547 0.78 - 0.780 cutA divalent cation tolerance homolog [Source:HGNC Symbol;Acc:HGNC:21101]
56. CDK2AP2 ENSG00000167797 5955 0.778 - 0.778 cyclin dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:30833]
57. EPN1 ENSG00000063245 5192 0.778 - 0.778 epsin 1 [Source:HGNC Symbol;Acc:HGNC:21604]
58. POLR2E ENSG00000099817 7529 0.776 - 0.776 RNA polymerase II subunit E [Source:HGNC Symbol;Acc:HGNC:9192]
59. TUBB ENSG00000183311, ENSG00000196230, ENSG00000224156, ENSG00000227739, ENSG00000229684, ENSG00000232421, ENSG00000232575, ENSG00000235067 314035 0.775 - 0.775 tubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]
60. ULK1 ENSG00000177169 6408 0.774 - 0.774 unc-51 like autophagy activating kinase 1 [Source:HGNC Symbol;Acc:HGNC:12558]
61. SKI ENSG00000157933 7837 0.773 - 0.773 SKI proto-oncogene [Source:HGNC Symbol;Acc:HGNC:10896]
62. PRDX2 ENSG00000167815 5248 0.771 - 0.771 peroxiredoxin 2 [Source:HGNC Symbol;Acc:HGNC:9353]
63. NDUFS2 ENSG00000158864 10441 0.77 - 0.770 NADH:ubiquinone oxidoreductase core subunit S2 [Source:HGNC Symbol;Acc:HGNC:7708]
64. PUF60 ENSG00000179950, ENSG00000274081 9938 0.769 - 0.769 poly(U) binding splicing factor 60 [Source:HGNC Symbol;Acc:HGNC:17042]
65. BAG6 ENSG00000096155, ENSG00000204463, ENSG00000227761, ENSG00000228760, ENSG00000229524, ENSG00000233348, ENSG00000234651 5198 0.769 - 0.769 BCL2 associated athanogene 6 [Source:HGNC Symbol;Acc:HGNC:13919]
66. CIZ1 ENSG00000148337 3149 0.768 - 0.768 CDKN1A interacting zinc finger protein 1 [Source:HGNC Symbol;Acc:HGNC:16744]
67. FTO ENSG00000140718 19943 0.768 - 0.768 FTO, alpha-ketoglutarate dependent dioxygenase [Source:HGNC Symbol;Acc:HGNC:24678]
68. KDM4B ENSG00000127663 2255 0.766 - 0.766 lysine demethylase 4B [Source:HGNC Symbol;Acc:HGNC:29136]
69. SPSB4 ENSG00000175093 3126 0.766 - 0.766 splA/ryanodine receptor domain and SOCS box containing 4 [Source:HGNC Symbol;Acc:HGNC:30630]
70. RAB8A ENSG00000167461 5438 0.766 - 0.766 RAB8A, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:7007]
71. ARF3 ENSG00000134287 6922 0.764 - 0.764 ADP ribosylation factor 3 [Source:HGNC Symbol;Acc:HGNC:654]
72. PPP2R1A ENSG00000105568 13029 0.763 - 0.763 protein phosphatase 2 scaffold subunit Aalpha [Source:HGNC Symbol;Acc:HGNC:9302]
73. FASN ENSG00000169710 19582 0.763 - 0.763 fatty acid synthase [Source:HGNC Symbol;Acc:HGNC:3594]
74. KRTCAP2 ENSG00000163463 28431 0.762 - 0.762 keratinocyte associated protein 2 [Source:HGNC Symbol;Acc:HGNC:28942]
75. CSK ENSG00000103653 5441 0.762 - 0.762 C-terminal Src kinase [Source:HGNC Symbol;Acc:HGNC:2444]
76. NOP9 ENSG00000196943, ENSG00000285326 4741 0.76 - 0.760 NOP9 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:19826]
77. PELP1 ENSG00000141456 2409 0.76 - 0.760 proline, glutamate and leucine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:30134]
78. CDIP1 ENSG00000089486, ENSG00000274336 2346 0.758 - 0.758 cell death inducing p53 target 1 [Source:HGNC Symbol;Acc:HGNC:13234]
79. SLC25A1 ENSG00000100075 6981 0.755 - 0.755 solute carrier family 25 member 1 [Source:HGNC Symbol;Acc:HGNC:10979]
80. CBS ENSG00000160200 15678 0.755 - 0.755 cystathionine-beta-synthase [Source:HGNC Symbol;Acc:HGNC:1550]
81. CDC37 ENSG00000105401 6040 0.754 - 0.754 cell division cycle 37 [Source:HGNC Symbol;Acc:HGNC:1735]
82. SSBP3 ENSG00000157216 27480 0.754 - 0.754 single stranded DNA binding protein 3 [Source:HGNC Symbol;Acc:HGNC:15674]
83. REPIN1 ENSG00000214022 4516 0.753 - 0.753 replication initiator 1 [Source:HGNC Symbol;Acc:HGNC:17922]
84. CFL1 ENSG00000172757 100783 0.753 - 0.753 cofilin 1 [Source:HGNC Symbol;Acc:HGNC:1874]
85. PMF1 ENSG00000160783 12298 0.752 - 0.752 polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112]
86. PGLS ENSG00000130313 2882 0.752 - 0.752 6-phosphogluconolactonase [Source:HGNC Symbol;Acc:HGNC:8903]
87. G6PD ENSG00000160211 5383 0.751 - 0.751 glucose-6-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4057]
88. ATP13A2 ENSG00000159363 3286 0.751 - 0.751 ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]
89. PRAF2 ENSG00000243279 10957 0.751 - 0.751 PRA1 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:28911]
90. PIK3R2 ENSG00000105647 8036 0.749 - 0.749 phosphoinositide-3-kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:8980]
91. MRPL4 ENSG00000105364 3473 0.749 - 0.749 mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276]
92. COTL1 ENSG00000103187 30280 0.749 - 0.749 coactosin like F-actin binding protein 1 [Source:HGNC Symbol;Acc:HGNC:18304]
93. CST3 ENSG00000101439 6740 0.749 - 0.749 cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]
94. DMWD ENSG00000185800 3745 0.748 - 0.748 DM1 locus, WD repeat containing [Source:HGNC Symbol;Acc:HGNC:2936]
95. WBSCR16 WBSCR16 2539 0.748 - 0.748
96. GPS1 ENSG00000169727 2907 0.747 - 0.747 G protein pathway suppressor 1 [Source:HGNC Symbol;Acc:HGNC:4549]
97. FKBP4 ENSG00000004478 8049 0.747 - 0.747 FK506 binding protein 4 [Source:HGNC Symbol;Acc:HGNC:3720]
98. NRM ENSG00000137404, ENSG00000206484, ENSG00000228854, ENSG00000228867, ENSG00000234809, ENSG00000235773, ENSG00000236843 7767 0.747 - 0.747 nurim [Source:HGNC Symbol;Acc:HGNC:8003]
99. FSCN1 ENSG00000075618 34169 0.746 - 0.746 fascin actin-bundling protein 1 [Source:HGNC Symbol;Acc:HGNC:11148]
100. HOXC6 ENSG00000197757 13409 0.746 - 0.746 homeobox C6 [Source:HGNC Symbol;Acc:HGNC:5128]

There are 129 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA