Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USO1

Gene Name Gene ID Reads Annotation
USO1 ENSGALG00000010878 9506 USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]











Genes with expression patterns similar to USO1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. USO1 ENSGALG00000010878 9506 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
2. RPF1 ENSGALG00000008796 9809 1.805 - - - 0.820 - - 0.985 - - - ribosome production factor 1 homolog
3. PSMD13 ENSGALG00000043684 14720 1.703 - - - - - 0.715 0.988 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
4. GLMN ENSGALG00000005959 2049 1.604 - - - 0.744 - - - 0.860 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
5. ING4 ENSGALG00000014457 5561 1.601 - - - 0.736 - - - 0.865 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
6. NME6 ENSGALG00000038044 1231 1.599 - - - 0.866 - - - - - 0.733 NME/NM23 nucleoside diphosphate kinase 6
7. HBE 329974 1.575 - - - 0.748 - - 0.827 - - - hemoglobin subunit epsilon
8. RAB33B ENSGALG00000009790 2340 1.518 - - - 0.751 - - - - - 0.767 RAB33B, member RAS oncogene family [Source:NCBI gene;Acc:422441]
9. KIAA1143 ENSGALG00000035952 6735 1.483 - - - 0.775 - - - - - 0.708 KIAA1143 [Source:NCBI gene;Acc:420709]
10. UFM1 ENSGALG00000017042 15794 1.444 - - - 0.725 - - - 0.719 - - ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
11. RMND5A ENSGALG00000015815 2903 1.441 - - - 0.705 - - - - - 0.736 required for meiotic nuclear division 5 homolog A [Source:NCBI gene;Acc:422920]
12. GALNTL4 GALNTL4 3548 0.997 - - - - - - 0.997 - - -
13. LOC424109 ENSGALG00000008738 3932 0.997 - - - - - - 0.997 - - - alpha-aspartyl dipeptidase
14. FHL3 ENSGALG00000035187 9753 0.996 - - - - - - 0.996 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
15. MYBL2 ENSGALG00000003503 15875 0.996 - - - - - - 0.996 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
16. C6H10ORF32 C6H10ORF32 7694 0.996 - - - - - - 0.996 - - -
17. GCAT ENSGALG00000012312 7906 0.996 - - - - - - 0.996 - - - glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
18. GLT8D1 ENSGALG00000001642 4232 0.996 - - - - - - 0.996 - - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
19. CCDC90B ENSGALG00000037072 5088 0.996 - - - - - - 0.996 - - - coiled-coil domain containing 90B [Source:HGNC Symbol;Acc:HGNC:28108]
20. COMMD8 ENSGALG00000026279 13509 0.995 - - - - - - 0.995 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
21. gga-mir-1723 ENSGALG00000025386 6662 0.995 - - - - - - 0.995 - - - gga-mir-1723 [Source:miRBase;Acc:MI0007460]
22. TTF1 4214 0.995 - - - - - - 0.995 - - - transcription termination factor 1
23. MMADHC ENSGALG00000012473 9026 0.995 - - - - - - 0.995 - - - methylmalonic aciduria and homocystinuria, cblD type [Source:NCBI gene;Acc:424311]
24. DIS3 ENSGALG00000016930 3696 0.995 - - - - - - 0.995 - - - DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]
25. ENSGALG00000006730 ENSGALG00000006730 3695 0.995 - - - - - - 0.995 - - -
26. PRKG1 ENSGALG00000003805 4654 0.993 - - - - - - 0.993 - - - protein kinase cGMP-dependent 1 [Source:HGNC Symbol;Acc:HGNC:9414]
27. SAV1 ENSGALG00000012341 3313 0.993 - - - - - - 0.993 - - - salvador family WW domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:17795]
28. APITD1 APITD1 11830 0.993 - - - - - - 0.993 - - -
29. CRAC1A CRAC1A 5265 0.993 - - - - - - 0.993 - - -
30. LOC425795 ENSGALG00000027696 2357 0.993 - - - - - - 0.993 - - - ectoderm-neural cortex protein 1-like, transcript variant X1
31. DNAJC10 ENSGALG00000008862 3114 0.993 - - - - - - 0.993 - - - DnaJ heat shock protein family (Hsp40) member C10 [Source:HGNC Symbol;Acc:HGNC:24637]
32. LYVE1 ENSGALG00000005643 1230 0.993 - - - - - - 0.993 - - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:NCBI gene;Acc:423038]
33. SNAPIN ENSGALG00000026796 11155 0.993 - - - - - - 0.993 - - - SNAP associated protein [Source:HGNC Symbol;Acc:HGNC:17145]
34. ZNF276 ENSGALG00000000513 2410 0.993 - - - - - - 0.993 - - - zinc finger protein 276 [Source:HGNC Symbol;Acc:HGNC:23330]
35. ATPAF2 ENSGALG00000004926 3393 0.993 - - - - - - 0.993 - - - ATP synthase mitochondrial F1 complex assembly factor 2 [Source:HGNC Symbol;Acc:HGNC:18802]
36. MAPT ENSGALG00000000625 659 0.992 - - - - - - 0.992 - - - microtubule associated protein tau [Source:NCBI gene;Acc:426737]
37. LUZP2 ENSGALG00000030151 585 0.992 - - - - - - 0.992 - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
38. LHFPL2 ENSGALG00000004437 500 0.992 - - - - - - 0.992 - - - LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]
39. RPUSD4 ENSGALG00000024326 3788 0.992 - - - - - - 0.992 - - - RNA pseudouridylate synthase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25898]
40. CNBP 42704 0.992 - - - - - - 0.992 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
41. CSDE1 ENSGALG00000002139 1683 0.992 - - - - - - 0.992 - - - cold shock domain containing E1 [Source:NCBI gene;Acc:419886]
42. SERBP1 ENSGALG00000011229 30489 0.992 - - - - - - 0.992 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
43. CTNNBL1 ENSGALG00000006817 6765 0.991 - - - - - - 0.991 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
44. POLR2C ENSGALG00000001168 10703 0.991 - - - - - - 0.991 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
45. MRPS15 ENSGALG00000044433 15356 0.991 - - - - - - 0.991 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
46. CHL1 ENSGALG00000037856 1565 0.991 - - - - - - 0.991 - - - cell adhesion molecule L1 like [Source:HGNC Symbol;Acc:HGNC:1939]
47. PPP3CB ENSGALG00000005243 8794 0.99 - - - - - - 0.990 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
48. CCAR1 ENSGALG00000004108 13219 0.99 - - - - - - 0.990 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
49. CDC5L ENSGALG00000016704 22893 0.99 - - - - - - 0.990 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
50. ABRACL ENSGALG00000013826 19445 0.99 - - - - - - 0.990 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
51. FGD5 ENSGALG00000008546 4031 0.989 - - - - - - 0.989 - - - FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19117]
52. NOB1 ENSGALG00000000693 15442 0.988 - - - - - - 0.988 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
53. RNF13 ENSGALG00000010411 8749 0.988 - - - - - - 0.988 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
54. ANLN 10479 0.988 - - - - - - 0.988 - - - anillin actin binding protein, transcript variant X2
55. EPHA3 ENSGALG00000015403 9811 0.987 - - - - - - 0.987 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
56. GSDMA ENSGALG00000013495 1650 0.987 - - - - - - 0.987 - - - gasdermin A [Source:NCBI gene;Acc:426132]
57. GDPD4 ENSGALG00000000690 824 0.987 - - - - - - 0.987 - - - glycerophosphodiester phosphodiesterase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24849]
58. MOB4 ENSGALG00000008128 10322 0.986 - - - - - - 0.986 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
59. SPINT1 ENSGALG00000008469 5735 0.986 - - - - - - 0.986 - - - serine peptidase inhibitor, Kunitz type 1, transcript variant X2
60. SH3RF3 ENSGALG00000016810 2169 0.986 - - - - - - 0.986 - - - SH3 domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:24699]
61. MRPS36 ENSGALG00000014789 7584 0.984 - - - - - - 0.984 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
62. ACTR6 ENSGALG00000040976 31271 0.983 - - - - - - 0.983 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
63. POLB ENSGALG00000040828 7462 0.982 - - - - - - 0.982 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
64. TP53INP1 ENSGALG00000041353 6890 0.98 - - - - - - 0.980 - - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
65. MRPS34 ENSGALG00000001792 14262 0.977 - - - - - - 0.977 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
66. ENSGALG00000013825 ENSGALG00000013825 16473 0.972 - - - - - - 0.972 - - -
67. PELI1 ENSGALG00000008837 11561 0.97 - - - - - - 0.970 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
68. CCT5 ENSGALG00000013041 56190 0.968 - - - - - - 0.968 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
69. MRPS26 ENSGALG00000014118 27422 0.965 - - - - - - 0.965 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
70. TRIB2 ENSGALG00000016457 17641 0.965 - - - - - - 0.965 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
71. MED1 ENSGALG00000001708 9556 0.962 - - - - - - 0.962 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
72. EZH2 ENSGALG00000043399 15881 0.96 - - - - - - 0.960 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
73. EXOSC7 ENSGALG00000030084 8654 0.959 - - - - - - 0.959 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
74. ZDHHC6 ENSGALG00000008870 16575 0.957 - - - - - - 0.957 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
75. TBL1X ENSGALG00000040006 28597 0.956 - - - - - - 0.956 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
76. BUB3 ENSGALG00000009681 36055 0.955 - - - - - - 0.955 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
77. ENSGALG00000000360 ENSGALG00000000360 15320 0.955 - - - - - - 0.955 - - -
78. TAF12 ENSGALG00000000991 8709 0.948 - - - - - - 0.948 - - - TATA-box binding protein associated factor 12 [Source:NCBI gene;Acc:419585]
79. HDLBP ENSGALG00000005823 24636 0.948 - - - - - - 0.948 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
80. TPI1 ENSGALG00000014526 43273 0.948 - - - - - - 0.948 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
81. PRDX1 ENSGALG00000010243 151918 0.946 - - - - - - 0.946 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
82. LOC407092 ENSGALG00000013809 10706 0.945 - - - - - - 0.945 - - - AD012Z, transcript variant X5
83. VDAC3 ENSGALG00000041463 21595 0.944 - - - - - - 0.944 - - - voltage dependent anion channel 3, transcript variant X9
84. STAG2 ENSGALG00000008482 13629 0.944 - - - - - - 0.944 - - - stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]
85. DDX18 ENSGALG00000012147 12463 0.944 - - - - - - 0.944 - - - DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]
86. SNX17 ENSGALG00000032468 13519 0.943 - - - - - - 0.943 - - - sorting nexin 17 [Source:HGNC Symbol;Acc:HGNC:14979]
87. TRA2A ENSGALG00000010973 37101 0.932 - - - - - - 0.932 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
88. RALB ENSGALG00000026493 14590 0.91 - - - - - - - 0.910 - - RAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]
89. LOC419404 ENSGALG00000021676 12078 0.91 - - - - - - - 0.910 - - uncharacterized LOC419404
90. PPP4R2 ENSGALG00000007810 15127 0.908 - - - - - - - 0.908 - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
91. SNRPB2 28675 0.908 - - - - - - 0.908 - - - small nuclear ribonucleoprotein polypeptide B2
92. WLS ENSGALG00000011238 20969 0.907 - - - - - - 0.907 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
93. CHPKCI CHPKCI 36217 0.905 - - - - - - 0.905 - - -
94. ARGLU1 ENSGALG00000016855 25633 0.901 - - - - - - 0.901 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
95. PYGB ENSGALG00000008508 2812 0.884 - - - - - - - 0.884 - - glycogen phosphorylase B [Source:NCBI gene;Acc:421248]
96. PPP1R7 ENSGALG00000031766 22187 0.884 - - - - - - - 0.884 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
97. WDYHV1 ENSGALG00000030059 2961 0.877 - - - 0.877 - - - - - - WDYHV motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25490]
98. LANCL2 ENSGALG00000032570 815 0.872 - - - - - - - 0.872 - - LanC like 2 [Source:HGNC Symbol;Acc:HGNC:6509]
99. ARID3C ENSGALG00000005839 646 0.872 - - - - - - - 0.872 - - AT-rich interaction domain 3C [Source:HGNC Symbol;Acc:HGNC:21209]
100. SPTBN5 395 0.872 - - - - - - - 0.872 - - spectrin beta, non-erythrocytic 5

There are 392 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA