Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
6. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
7. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
8. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
9. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
10. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
11. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
12. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
13. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
14. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
15. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
16. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
17. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
18. fam5b fam5b 45 1 - - - - - 1.000 - - -
19. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
20. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
21. tp73 ENSDARG00000017953 6 1 - - - - - - - - 1.000 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
22. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
23. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
24. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
25. nrp2a ENSDARG00000096546 2 1 - - - - - - - - 1.000 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
26. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
27. il34_1 ENSDARG00000091003 1 1 - - - - - - - - 1.000 interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
28. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
29. slc30a2 ENSDARG00000021305 4 1 - - - - - 1.000 - - - solute carrier family 30 (zinc transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-347]
30. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
31. itm1 itm1 32 1 - - - - - 1.000 - - -
32. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
33. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
34. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
35. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
36. si:dkey-30j19.3 si:dkey-30j19.3 3 1 - - - - - - - - 1.000
37. cryaba ENSDARG00000042621 2 1 - - - - - - - - 1.000 crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
38. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
39. dapk2 dapk2 24 1 - - - - - 1.000 - - -
40. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
41. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
42. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
43. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
44. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
45. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
46. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
47. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
48. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
49. DKK3 DKK3 12 1 - - - - - 1.000 - - -
50. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
51. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
52. QDPR QDPR 11 1 - - - - - - - - 1.000
53. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
54. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
55. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
56. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
57. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
58. mxb ENSDARG00000004953 3 1 - - - - - - - - 1.000 myxovirus (influenza) resistance B [Source:ZFIN;Acc:ZDB-GENE-030721-6]
59. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
60. CU302413.1 ENSDARG00000101202 1 1 - - - - - - - - 1.000
61. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
62. NXPH4 11 1 - - - - - - - - 1.000 neurexophilin 4
63. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - - - - - - - - 1.000
64. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
65. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
66. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
67. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
68. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
69. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
70. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
71. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
72. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
73. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
74. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
75. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
76. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
77. si:dkey-78a14.5 14 1 - - - - - - - - 1.000 si:dkey-78a14.5, transcript variant X2
78. slc35f3b ENSDARG00000059850 5 1 - - - - - - - - 1.000 solute carrier family 35, member F3b [Source:ZFIN;Acc:ZDB-GENE-090312-118]
79. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
80. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
81. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
82. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
83. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
84. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
85. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
86. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
87. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
88. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
89. IFT43 4 1 - - - - - - - - 1.000 intraflagellar transport 43
90. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
91. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
92. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
93. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
94. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
95. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - - - 1.000
96. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
97. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
98. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
99. OGN 1 1 - - - - - - - - 1.000 osteoglycin
100. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA