Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
6. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
7. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
8. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
9. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
10. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
11. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
12. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
13. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
14. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
15. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
16. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
17. CU655870.1 ENSDARG00000101035 1 1 - - - - - - - - 1.000
18. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
19. cryaba ENSDARG00000042621 2 1 - - - - - - - - 1.000 crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
20. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
21. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
22. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
23. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
24. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
25. OMA1 ENSDARG00000090503 19 1 - - - - - - - - 1.000 OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
26. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
27. tp73 ENSDARG00000017953 6 1 - - - - - - - - 1.000 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
28. pcdh15b ENSDARG00000008127 2 1 - - - - - - - - 1.000 protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
29. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
30. CABZ01072487.1 ENSDARG00000098214 1 1 - - - - - - - - 1.000
31. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
32. QDPR QDPR 11 1 - - - - - - - - 1.000
33. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
34. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
35. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
36. BX248324.1 ENSDARG00000096489 3 1 - - - - - - - - 1.000
37. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
38. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
39. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
40. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
41. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
42. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
43. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
44. NXPH4 11 1 - - - - - - - - 1.000 neurexophilin 4
45. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
46. hip1r hip1r 10 1 - - - - - 1.000 - - -
47. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
48. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
49. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
50. samd12 1 1 - - - - - - - - 1.000 sterile alpha motif domain containing 12, transcript variant X2
51. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
52. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
53. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - - - - - - - - 1.000
54. si:dkey-30j19.3 si:dkey-30j19.3 3 1 - - - - - - - - 1.000
55. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
56. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
57. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
58. C22H19orf10 C22H19orf10 1 1 - - - - - - - - 1.000
59. mxb ENSDARG00000004953 3 1 - - - - - - - - 1.000 myxovirus (influenza) resistance B [Source:ZFIN;Acc:ZDB-GENE-030721-6]
60. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
61. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
62. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
63. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
64. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
65. slc35f3b ENSDARG00000059850 5 1 - - - - - - - - 1.000 solute carrier family 35, member F3b [Source:ZFIN;Acc:ZDB-GENE-090312-118]
66. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
67. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
68. DKK3 DKK3 12 1 - - - - - 1.000 - - -
69. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
70. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
71. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
72. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
73. dapk2 dapk2 24 1 - - - - - 1.000 - - -
74. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
75. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
76. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
77. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
78. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
79. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
80. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
81. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
82. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
83. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
84. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
85. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
86. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
87. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
88. si:dkey-78a14.5 14 1 - - - - - - - - 1.000 si:dkey-78a14.5, transcript variant X2
89. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
90. IFT43 4 1 - - - - - - - - 1.000 intraflagellar transport 43
91. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
92. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
93. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
94. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
95. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
96. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
97. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
98. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
99. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
100. il34_1 ENSDARG00000091003 1 1 - - - - - - - - 1.000 interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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