Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
6. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
7. C22H19orf10 C22H19orf10 1 1 - - - - - - - - 1.000
8. mxb ENSDARG00000004953 3 1 - - - - - - - - 1.000 myxovirus (influenza) resistance B [Source:ZFIN;Acc:ZDB-GENE-030721-6]
9. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
10. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
11. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
12. slc35f3b ENSDARG00000059850 5 1 - - - - - - - - 1.000 solute carrier family 35, member F3b [Source:ZFIN;Acc:ZDB-GENE-090312-118]
13. si:dkey-30j19.3 si:dkey-30j19.3 3 1 - - - - - - - - 1.000
14. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
15. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
16. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
17. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
18. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
19. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - - - - - - - - 1.000
20. hip1r hip1r 10 1 - - - - - 1.000 - - -
21. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
22. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
23. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
24. samd12 1 1 - - - - - - - - 1.000 sterile alpha motif domain containing 12, transcript variant X2
25. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
26. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
27. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
28. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
29. dapk2 dapk2 24 1 - - - - - 1.000 - - -
30. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
31. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
32. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
33. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
34. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
35. dre-mir-196c dre-mir-196c 2 1 - - - - - 1.000 - - -
36. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
37. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
38. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
39. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
40. DKK3 DKK3 12 1 - - - - - 1.000 - - -
41. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
42. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
43. CU655870.1 ENSDARG00000101035 1 1 - - - - - - - - 1.000
44. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
45. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
46. cryaba ENSDARG00000042621 2 1 - - - - - - - - 1.000 crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
47. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
48. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
49. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
50. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
51. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
52. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
53. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
54. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
55. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
56. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
57. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
58. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
59. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
60. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
61. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
62. NXPH4 11 1 - - - - - - - - 1.000 neurexophilin 4
63. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
64. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
65. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
66. BX248324.1 ENSDARG00000096489 3 1 - - - - - - - - 1.000
67. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
68. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
69. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
70. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
71. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
72. QDPR QDPR 11 1 - - - - - - - - 1.000
73. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
74. CABZ01072487.1 ENSDARG00000098214 1 1 - - - - - - - - 1.000
75. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
76. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
77. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
78. OMA1 ENSDARG00000090503 19 1 - - - - - - - - 1.000 OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
79. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
80. tp73 ENSDARG00000017953 6 1 - - - - - - - - 1.000 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
81. pcdh15b ENSDARG00000008127 2 1 - - - - - - - - 1.000 protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
82. OGN 1 1 - - - - - - - - 1.000 osteoglycin
83. gltpb ENSDARG00000077962 5 1 - - - - - 1.000 - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
84. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
85. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
86. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
87. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
88. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
89. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
90. si:dkey-95f11.6 si:dkey-95f11.6 4 1 - - - - - - - - 1.000
91. fam5b fam5b 45 1 - - - - - 1.000 - - -
92. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
93. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
94. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
95. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]
96. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
97. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
98. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
99. itm1 itm1 32 1 - - - - - 1.000 - - -
100. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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