Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
6. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
7. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
8. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
9. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
10. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
11. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
12. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
13. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
14. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
15. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
16. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
17. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
18. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
19. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
20. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
21. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
22. si:dkey-78a14.5 14 1 - - - - - - - - 1.000 si:dkey-78a14.5, transcript variant X2
23. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
24. tp73 ENSDARG00000017953 6 1 - - - - - - - - 1.000 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
25. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
26. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
27. ebi3 ENSDARG00000053620 5 1 - - - - - 1.000 - - - Epstein-Barr virus induced 3 [Source:ZFIN;Acc:ZDB-GENE-070912-615]
28. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
29. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
30. cryaba ENSDARG00000042621 2 1 - - - - - - - - 1.000 crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
31. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
32. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
33. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
34. si:dkey-95f11.6 si:dkey-95f11.6 4 1 - - - - - - - - 1.000
35. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
36. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
37. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
38. DKK3 DKK3 12 1 - - - - - 1.000 - - -
39. IFT43 4 1 - - - - - - - - 1.000 intraflagellar transport 43
40. NXPH4 11 1 - - - - - - - - 1.000 neurexophilin 4
41. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
42. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
43. CR384075.2 CR384075.2 1 1 - - - - - 1.000 - - -
44. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
45. OGN 1 1 - - - - - - - - 1.000 osteoglycin
46. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
47. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
48. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
49. samd12 1 1 - - - - - - - - 1.000 sterile alpha motif domain containing 12, transcript variant X2
50. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
51. abcd1 ENSDARG00000074876 6 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
52. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
53. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
54. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
55. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
56. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
57. zgc:173729 3 1 - - - - - - - - 1.000 zgc:173729
58. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
59. fam5b fam5b 45 1 - - - - - 1.000 - - -
60. si:rp71-1c10.10 ENSDARG00000086255, ENSDARG00000109343 14 1 - - - - - 1.000 - - - si:rp71-1c10.10 [Source:ZFIN;Acc:ZDB-GENE-130603-55]
61. BX248324.1 ENSDARG00000096489 3 1 - - - - - - - - 1.000
62. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
63. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
64. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
65. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
66. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
67. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
68. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
69. il10 ENSDARG00000078147 3 1 - - - - - - - - 1.000 interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
70. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
71. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
72. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
73. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
74. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
75. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
76. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
77. EXT1 EXT1 3 1 - - - - - 1.000 - - -
78. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
79. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
80. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
81. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
82. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
83. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
84. nrp2a ENSDARG00000096546 2 1 - - - - - - - - 1.000 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
85. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
86. QDPR QDPR 11 1 - - - - - - - - 1.000
87. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
88. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
89. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
90. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
91. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
92. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
93. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
94. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
95. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
96. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
97. URB1_1 URB1_1 8 1 - - - - - 1.000 - - -
98. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
99. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
100. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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