Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
6. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
7. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
8. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
9. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
10. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
11. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
12. si:ch211-165l15.1 si:ch211-165l15.1 10 1 - - - - - 1.000 - - -
13. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
14. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
15. smad9 368 1 - - - - - 1.000 - - - SMAD family member 9, transcript variant X1
16. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
17. ENSDARG00000091446 ENSDARG00000091446 239 1 - - - - - 1.000 - - -
18. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
19. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
20. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
21. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
22. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
23. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
24. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
25. TENM2 ENSDARG00000037122 48 1 - - - - - 1.000 - - - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
26. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
27. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
28. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
29. CU655870.1 ENSDARG00000101035 1 1 - - - - - - - - 1.000
30. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
31. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
32. loxhd1b ENSDARG00000074638 6 1 - - - - - 1.000 - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
33. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
34. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
35. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
36. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
37. si:ch211-215e19.8 ENSDARG00000098106 1 1 - - - - - - - - 1.000 si:ch211-215e19.8 [Source:ZFIN;Acc:ZDB-GENE-070705-106]
38. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
39. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
40. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
41. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
42. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
43. C22H19orf10 C22H19orf10 1 1 - - - - - - - - 1.000
44. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
45. fam19a5 fam19a5 8 1 - - - - - 1.000 - - -
46. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
47. OGN 1 1 - - - - - - - - 1.000 osteoglycin
48. QDPR QDPR 11 1 - - - - - - - - 1.000
49. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
50. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
51. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
52. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
53. PRDM12 PRDM12 133 1 - - - - - 1.000 - - -
54. EXT1 EXT1 3 1 - - - - - 1.000 - - -
55. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - - - - - 1.000
56. dapk2 dapk2 24 1 - - - - - 1.000 - - -
57. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
58. UIMC1 200 1 - - - - - 1.000 - - - ubiquitin interaction motif containing 1
59. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
60. hip1r hip1r 10 1 - - - - - 1.000 - - -
61. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
62. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
63. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
64. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
65. zgc:173729 3 1 - - - - - - - - 1.000 zgc:173729
66. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
67. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
68. si:dkey-122c11.7 ENSDARG00000103721 3 1 - - - - - 1.000 - - - si:dkey-122c11.7 [Source:ZFIN;Acc:ZDB-GENE-110913-120]
69. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
70. si:dkey-78a14.5 14 1 - - - - - - - - 1.000 si:dkey-78a14.5, transcript variant X2
71. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
72. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - 1.000 - - -
73. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
74. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - - - 1.000
75. si:dkey-30j19.3 si:dkey-30j19.3 3 1 - - - - - - - - 1.000
76. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
77. il34_1 ENSDARG00000091003 1 1 - - - - - - - - 1.000 interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
78. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
79. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - - - - - - - - 1.000
80. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
81. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
82. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
83. fam5b fam5b 45 1 - - - - - 1.000 - - -
84. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
85. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
86. cyp39a1 ENSDARG00000017982 4 1 - - - - - 1.000 - - - cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
87. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
88. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
89. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
90. slc35f3b ENSDARG00000059850 5 1 - - - - - - - - 1.000 solute carrier family 35, member F3b [Source:ZFIN;Acc:ZDB-GENE-090312-118]
91. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
92. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
93. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
94. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
95. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
96. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
97. ASAP1 ASAP1 47 1 - - - - - 1.000 - - -
98. tp73 ENSDARG00000017953 6 1 - - - - - - - - 1.000 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
99. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
100. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA