Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. pcdh15b ENSDARG00000008127 2 1 - - - - - - - - 1.000 protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
6. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
7. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
8. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
9. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - - - 1.000
10. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
11. OGN 1 1 - - - - - - - - 1.000 osteoglycin
12. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
13. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
14. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
15. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
16. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
17. IFT43 4 1 - - - - - - - - 1.000 intraflagellar transport 43
18. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
19. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
20. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
21. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
22. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
23. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
24. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
25. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
26. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
27. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
28. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
29. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
30. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
31. si:dkey-95f11.6 si:dkey-95f11.6 4 1 - - - - - - - - 1.000
32. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
33. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
34. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
35. il10 ENSDARG00000078147 3 1 - - - - - - - - 1.000 interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
36. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
37. samd12 1 1 - - - - - - - - 1.000 sterile alpha motif domain containing 12, transcript variant X2
38. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
39. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
40. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
41. BX248324.1 ENSDARG00000096489 3 1 - - - - - - - - 1.000
42. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
43. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
44. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
45. CU655870.1 ENSDARG00000101035 1 1 - - - - - - - - 1.000
46. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
47. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
48. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
49. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
50. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
51. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
52. C22H19orf10 C22H19orf10 1 1 - - - - - - - - 1.000
53. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
54. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - - - - - 1.000
55. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
56. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
57. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
58. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
59. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
60. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
61. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
62. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
63. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
64. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
65. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
66. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
67. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
68. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
69. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
70. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
71. CABZ01072487.1 ENSDARG00000098214 1 1 - - - - - - - - 1.000
72. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
73. hip1r hip1r 10 1 - - - - - 1.000 - - -
74. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
75. zgc:173729 3 1 - - - - - - - - 1.000 zgc:173729
76. OMA1 ENSDARG00000090503 19 1 - - - - - - - - 1.000 OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
77. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
78. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
79. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
80. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
81. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
82. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
83. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
84. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
85. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
86. EXT1 EXT1 3 1 - - - - - 1.000 - - -
87. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
88. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
89. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
90. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
91. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
92. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
93. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
94. nrp2a ENSDARG00000096546 2 1 - - - - - - - - 1.000 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
95. KHNYN ENSDARG00000092488 10 1 - - - - - 1.000 - - - KH and NYN domain containing [Source:ZFIN;Acc:ZDB-GENE-141215-64]
96. nupl2 ENSDARG00000029043 105 1 - - - - - 1.000 - - - nucleoporin like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2292]
97. il34_1 ENSDARG00000091003 1 1 - - - - - - - - 1.000 interleukin 34 [Source:ZFIN;Acc:ZDB-GENE-050419-150]
98. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
99. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
100. si:dkey-253d23.8 ENSDARG00000094427 26 1 - - - - - 1.000 - - - si:dkey-253d23.8 [Source:ZFIN;Acc:ZDB-GENE-050208-568]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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