Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. nrp2a ENSDARG00000096546 2 1 - - - - - - - - 1.000 neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
6. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
7. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
8. zgc:114046 ENSDARG00000091728 68 1 - - - - - 1.000 - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
9. si:dkey-78a14.5 14 1 - - - - - - - - 1.000 si:dkey-78a14.5, transcript variant X2
10. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - - - 1.000 - - -
11. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
12. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - - - - - 1.000 - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
13. si:dkey-47k20.3 ENSDARG00000029635 0 1 - - - - - 1.000 - - - si:dkey-47k20.3 [Source:ZFIN;Acc:ZDB-GENE-060503-830]
14. si:ch211-121j5.2 si:ch211-121j5.2 86 1 - - - - - 1.000 - - -
15. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
16. akt3a_1 ENSDARG00000104810 12 1 - - - - - 1.000 - - - v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
17. cryaba ENSDARG00000042621 2 1 - - - - - - - - 1.000 crystallin, alpha B, a [Source:ZFIN;Acc:ZDB-GENE-991119-2]
18. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
19. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
20. slc35f3b ENSDARG00000059850 5 1 - - - - - - - - 1.000 solute carrier family 35, member F3b [Source:ZFIN;Acc:ZDB-GENE-090312-118]
21. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
22. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 1 - - - - - 1.000 - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
23. hip1r hip1r 10 1 - - - - - 1.000 - - -
24. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
25. efemp2b_1 ENSDARG00000020811 77 1 - - - - - 1.000 - - - EGF containing fibulin extracellular matrix protein 2b [Source:ZFIN;Acc:ZDB-GENE-030219-125]
26. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
27. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - - - 1.000
28. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
29. DKK3 DKK3 12 1 - - - - - 1.000 - - -
30. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
31. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
32. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
33. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
34. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
35. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
36. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
37. il10 ENSDARG00000078147 3 1 - - - - - - - - 1.000 interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
38. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
39. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - - - - - 1.000
40. spo11 ENSDARG00000013837 7 1 - - - - - 1.000 - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
41. pcdh15b ENSDARG00000008127 2 1 - - - - - - - - 1.000 protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
42. mxb ENSDARG00000004953 3 1 - - - - - - - - 1.000 myxovirus (influenza) resistance B [Source:ZFIN;Acc:ZDB-GENE-030721-6]
43. OGN 1 1 - - - - - - - - 1.000 osteoglycin
44. si:dkey-208k4.1 si:dkey-208k4.1 15 1 - - - - - 1.000 - - -
45. hoxc9a ENSDARG00000092809 18 1 - - - - - 1.000 - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
46. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
47. CU302413.1 ENSDARG00000101202 1 1 - - - - - - - - 1.000
48. QDPR QDPR 11 1 - - - - - - - - 1.000
49. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
50. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
51. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
52. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
53. ERP27 2 1 - - - - - 1.000 - - - endoplasmic reticulum protein 27
54. zgc:173729 3 1 - - - - - - - - 1.000 zgc:173729
55. CABZ01072487.1 ENSDARG00000098214 1 1 - - - - - - - - 1.000
56. itm1 itm1 32 1 - - - - - 1.000 - - -
57. CABZ01090303.1 CABZ01090303.1 2 1 - - - - - 1.000 - - -
58. CABZ01079258.1 CABZ01079258.1 3 1 - - - - - 1.000 - - -
59. osbp2 ENSDARG00000053487 42 1 - - - - - 1.000 - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
60. tp73 ENSDARG00000017953 6 1 - - - - - - - - 1.000 tumor protein p73 [Source:ZFIN;Acc:ZDB-GENE-030814-2]
61. si:ch73-138e16.1 si:ch73-138e16.1 5 1 - - - - - - - - 1.000
62. TSPEAR TSPEAR 9 1 - - - - - 1.000 - - -
63. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
64. CABZ01021435.3 CABZ01021435.3 5 1 - - - - - 1.000 - - -
65. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
66. zgc:173702 ENSDARG00000110229 411 1 - - - - - 1.000 - - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
67. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
68. si:dkey-25c4.1 si:dkey-25c4.1 1 1 - - - - - 1.000 - - -
69. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
70. ppp1r9a ENSDARG00000061304 12 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 9A [Source:ZFIN;Acc:ZDB-GENE-060503-660]
71. NXPH4 11 1 - - - - - - - - 1.000 neurexophilin 4
72. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
73. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
74. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
75. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
76. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
77. mfsd4a mfsd4a 179 1 - - - - - 1.000 - - -
78. EXT1 EXT1 3 1 - - - - - 1.000 - - -
79. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
80. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
81. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
82. setd6 ENSDARG00000043986, ENSDARG00000113991 194 1 - - - - - 1.000 - - - SET domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-1067]
83. zgc:153642 ENSDARG00000052900 0 1 - - - - - 1.000 - - - zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
84. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
85. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
86. OMA1 ENSDARG00000090503 19 1 - - - - - - - - 1.000 OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
87. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
88. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
89. CU929163.1 CU929163.1 11 1 - - - - - 1.000 - - -
90. BRSK2_2 BRSK2_2 3 1 - - - - - 1.000 - - -
91. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
92. prox2 ENSDARG00000041952, ENSDARG00000117137 112 1 - - - - - 1.000 - - - prospero homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-081003-3]
93. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
94. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
95. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - - 1.000 - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
96. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
97. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
98. strip1 ENSDARG00000074084 0 1 - - - - - 1.000 - - - striatin interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2927]
99. si:dkey-207j16.9 si:dkey-207j16.9 0 1 - - - - - 1.000 - - -
100. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA