Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for USF2

Gene Name Gene ID Reads Annotation
USF2 ENSDARG00000020228 3 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]










Genes with expression patterns similar to USF2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. USF2 ENSDARG00000020228 3 3 - - - - - 1.000 - 1.000 1.000 upstream transcription factor 2, c-fos interacting [Source:ZFIN;Acc:ZDB-GENE-030131-8475]
2. vip ENSDARG00000078247 10 1.986 - - - - - 1.000 - - 0.986 vasoactive intestinal peptide [Source:ZFIN;Acc:ZDB-GENE-080204-3]
3. mir124-1 10 1.928 - - - - - 1.000 - - 0.928 microRNA 124-1
4. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.897 - - - - - 1.000 - - 0.897 sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
5. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - - - - 1.000 - - -
6. si:dkey-20i20.13 si:dkey-20i20.13 0 1 - - - - - 1.000 - - -
7. si:dkey-103i16.2_1 si:dkey-103i16.2_1 105 1 - - - - - 1.000 - - -
8. CR753817.1 ENSDARG00000110927 26 1 - - - - - 1.000 - - -
9. si:dkey-95f11.6 si:dkey-95f11.6 4 1 - - - - - - - - 1.000
10. si:dkeyp-28d2.4 ENSDARG00000041828 0 1 - - - - - 1.000 - - - si:dkeyp-28d2.4 [Source:ZFIN;Acc:ZDB-GENE-091204-68]
11. BX649417.1 ENSDARG00000117387 1 1 - - - - - 1.000 - - -
12. BX248324.1 ENSDARG00000096489 3 1 - - - - - - - - 1.000
13. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1 - - - - - 1.000 - - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
14. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - - - 1.000 - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
15. samd12 1 1 - - - - - - - - 1.000 sterile alpha motif domain containing 12, transcript variant X2
16. il10 ENSDARG00000078147 3 1 - - - - - - - - 1.000 interleukin 10 [Source:ZFIN;Acc:ZDB-GENE-051111-1]
17. si:ch211-145g9.7 32 1 - - - - - 1.000 - - - si:ch211-145g9.7, transcript variant X1
18. nr5a1b ENSDARG00000023362 54 1 - - - - - 1.000 - - - nuclear receptor subfamily 5, group A, member 1b [Source:ZFIN;Acc:ZDB-GENE-040702-6]
19. CU861891.1 ENSDARG00000097162 0 1 - - - - - 1.000 - - -
20. CU655870.1 ENSDARG00000101035 1 1 - - - - - - - - 1.000
21. panx2 ENSDARG00000063019 3 1 - - - - - 1.000 - - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
22. si:ch211-39a7.1 ENSDARG00000037427 31 1 - - - - - 1.000 - - - si:ch211-39a7.1 [Source:ZFIN;Acc:ZDB-GENE-060503-606]
23. pcdh15b ENSDARG00000008127 2 1 - - - - - - - - 1.000 protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
24. si:ch211-222e23.2 si:ch211-222e23.2 1 1 - - - - - - - - 1.000
25. scpp8 ENSDARG00000093124 54 1 - - - - - 1.000 - - - secretory calcium-binding phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-090424-2]
26. CABZ01019904.1 ENSDARG00000104193 6 1 - - - - - - - - 1.000
27. OGN 1 1 - - - - - - - - 1.000 osteoglycin
28. si:dkey-149m13.4 ENSDARG00000114536 2 1 - - - - - - - - 1.000 si:dkey-149m13.4 [Source:ZFIN;Acc:ZDB-GENE-110914-34]
29. rbfox3l rbfox3l 34 1 - - - - - 1.000 - - -
30. trhra ENSDARG00000076546 3 1 - - - - - 1.000 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
31. si:dkey-14o18.3 si:dkey-14o18.3 5 1 - - - - - - - - 1.000
32. cabp2b ENSDARG00000052277 119 1 - - - - - 1.000 - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
33. tatdn3 ENSDARG00000054076 130 1 - - - - - 1.000 - - - TatD DNase domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050522-192]
34. CU571066.3 CU571066.3 0 1 - - - - - 1.000 - - -
35. cntn2 ENSDARG00000000472, ENSDARG00000110222 3 1 - - - - - - - - 1.000 contactin 2 [Source:ZFIN;Acc:ZDB-GENE-990630-12]
36. BX248582.3 BX248582.3 3 1 - - - - - 1.000 - - -
37. IFT43 4 1 - - - - - - - - 1.000 intraflagellar transport 43
38. PLBD1 ENSDARG00000063313 1 1 - - - - - 1.000 - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
39. lct ENSDARG00000060671 4 1 - - - - - 1.000 - - - lactase [Source:ZFIN;Acc:ZDB-GENE-081104-434]
40. mylkb ENSDARG00000004753 95 1 - - - - - 1.000 - - - myosin light chain kinase b [Source:ZFIN;Acc:ZDB-GENE-041111-150]
41. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - - - - 1.000 - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
42. cdk5r2b ENSDARG00000078671 20 1 - - - - - 1.000 - - - cyclin-dependent kinase 5, regulatory subunit 2b (p39) [Source:ZFIN;Acc:ZDB-GENE-040801-251]
43. CABZ01048675.1 CABZ01048675.1 4 1 - - - - - 1.000 - - -
44. si:dkey-156m18.1 si:dkey-156m18.1 13 1 - - - - - 1.000 - - -
45. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1 - - - - - 1.000 - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
46. CABZ01072487.1 ENSDARG00000098214 1 1 - - - - - - - - 1.000
47. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - - 1.000 - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
48. ela3l ENSDARG00000007276 11 1 - - - - - 1.000 - - - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
49. CABZ01021426.1 CABZ01021426.1 25 1 - - - - - 1.000 - - -
50. 5S_rRNA_4 5S_rRNA_4 0 1 - - - - - 1.000 - - -
51. hsd17b2 ENSDARG00000045553 14 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-040928-1]
52. si:ch73-116o1.3 si:ch73-116o1.3 1 1 - - - - - 1.000 - - -
53. hip1r hip1r 10 1 - - - - - 1.000 - - -
54. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - - 1.000 BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
55. OMA1 ENSDARG00000090503 19 1 - - - - - - - - 1.000 OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
56. mstnb ENSDARG00000069133 3 1 - - - - - 1.000 - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
57. zgc:173729 3 1 - - - - - - - - 1.000 zgc:173729
58. soul5l ENSDARG00000089879 20 1 - - - - - - - - 1.000 heme-binding protein soul5, like [Source:ZFIN;Acc:ZDB-GENE-121214-315]
59. EXT1 EXT1 3 1 - - - - - 1.000 - - -
60. slc8a1b ENSDARG00000043406, ENSDARG00000110108 4 1 - - - - - - - - 1.000 solute carrier family 8 (sodium/calcium exchanger), member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]
61. si:ch211-222m18.4 ENSDARG00000094425 7 1 - - - - - - - - 1.000 si:ch211-222m18.4 [Source:ZFIN;Acc:ZDB-GENE-050419-64]
62. rgs9bp ENSDARG00000009466 41 1 - - - - - 1.000 - - - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
63. CU463316.1 CU463316.1 1 1 - - - - - 1.000 - - -
64. caps2 ENSDARG00000058486 4 1 - - - - - - - - 1.000 calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
65. rab11bb_1 ENSDARG00000090086 7 1 - - - - - 1.000 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
66. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - - - - 1.000 - - -
67. si:rp71-84d19.2 si:rp71-84d19.2 34 1 - - - - - 1.000 - - -
68. si:ch211-202h22.10 ENSDARG00000087290 13 1 - - - - - 1.000 - - - si:ch211-202h22.10 [Source:ZFIN;Acc:ZDB-GENE-110914-121]
69. CABZ01044611.1 CABZ01044611.1 8 1 - - - - - 1.000 - - -
70. v2rh9 ENSDARG00000056009 0 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h9 [Source:ZFIN;Acc:ZDB-GENE-050419-176]
71. p4ha1a_1 ENSDARG00000033537, ENSDARG00000114754 36 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide I a [Source:ZFIN;Acc:ZDB-GENE-040724-91]
72. FAM163A_1 ENSDARG00000093021 6 1 - - - - - 1.000 - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
73. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - 1.000 - - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
74. TMEM241 ENSDARG00000090685 11 1 - - - - - 1.000 - - - transmembrane protein 241 [Source:ZFIN;Acc:ZDB-GENE-131127-368]
75. C24H16orf11 C24H16orf11 32 1 - - - - - 1.000 - - -
76. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - 1.000 - - -
77. BX119910.15 BX119910.15 4 1 - - - - - 1.000 - - -
78. RIMS1 RIMS1 9 1 - - - - - 1.000 - - -
79. C22H19orf10 C22H19orf10 1 1 - - - - - - - - 1.000
80. BX005265.1 BX005265.1 4 1 - - - - - - - - 1.000
81. prf1.7 1 1 - - - - - 1.000 - - - perforin 1.7
82. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - - - - - 1.000
83. birc5b ENSDARG00000055655, ENSDARG00000110817 8 1 - - - - - 1.000 - - - baculoviral IAP repeat containing 5b [Source:ZFIN;Acc:ZDB-GENE-030826-2]
84. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - - 1.000 - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
85. efr3ba ENSDARG00000033516 19 1 - - - - - 1.000 - - - EFR3 homolog Ba (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030616-64]
86. ttll3 ENSDARG00000053728 7 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060616-182]
87. C6H3orf18 C6H3orf18 7 1 - - - - - 1.000 - - -
88. tecpr1a ENSDARG00000062515 7 1 - - - - - 1.000 - - - tectonin beta-propeller repeat containing 1a [Source:ZFIN;Acc:ZDB-GENE-070112-1792]
89. si:dkey-57a22.12 si:dkey-57a22.12 23 1 - - - - - 1.000 - - -
90. CABZ01060030.1 ENSDARG00000106579 55 1 - - - - - 1.000 - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
91. si:dkey-8o9.5 si:dkey-8o9.5 6 1 - - - - - - - - 1.000
92. si:dkey-201i6.5 si:dkey-201i6.5 3 1 - - - - - - - - 1.000
93. si:ch73-167f18.4 si:ch73-167f18.4 9 1 - - - - - 1.000 - - -
94. si:dkey-97l20.5 si:dkey-97l20.5 33 1 - - - - - 1.000 - - -
95. CABZ01061873.1 CABZ01061873.1 51 1 - - - - - 1.000 - - -
96. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1 - - - - - 1.000 - - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
97. MFAP4_4 MFAP4_4 9 1 - - - - - 1.000 - - -
98. 5S_rRNA_19 5S_rRNA_19 1 1 - - - - - 1.000 - - -
99. sat1b ENSDARG00000032272, ENSDARG00000112956 72 1 - - - - - 1.000 - - - spermidine/spermine N1-acetyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-041001-39]
100. dapk2 dapk2 24 1 - - - - - 1.000 - - -

There are 319 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA