Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UROD

Gene Name Gene ID Reads Annotation
UROD ENSGALG00000010219 5810 uroporphyrinogen decarboxylase, transcript variant X2











Genes with expression patterns similar to UROD

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UROD ENSGALG00000010219 5810 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 uroporphyrinogen decarboxylase, transcript variant X2
2. EXOSC10 ENSGALG00000003086 3223 1.46 - - - - - - 0.704 0.756 - - exosome component 10 [Source:NCBI gene;Acc:419454]
3. HBE 329974 0.863 - 0.863 - - - - - - - - hemoglobin subunit epsilon
4. HBB HBB 7552 0.847 - 0.847 - - - - - - - -
5. HBZ ENSGALG00000023740 507289 0.836 - 0.836 - - - - - - - - hemoglobin subunit zeta [Source:NCBI gene;Acc:416650]
6. TSPO2 ENSGALG00000003212 5141 0.835 - 0.835 - - - - - - - - translocator protein 2 [Source:HGNC Symbol;Acc:HGNC:21256]
7. HBG1 HBG1 468163 0.835 - 0.835 - - - - - - - -
8. RABGGTB ENSGALG00000011388 11654 0.825 - - - - - 0.825 - - - - Rab geranylgeranyltransferase subunit beta [Source:HGNC Symbol;Acc:HGNC:9796]
9. ACTN2 ENSGALG00000014463 1724 0.821 - - - - - 0.821 - - - - actinin alpha 2 [Source:NCBI gene;Acc:396263]
10. TMEM209 ENSGALG00000008036 1190 0.808 - - - - - 0.808 - - - - transmembrane protein 209 [Source:HGNC Symbol;Acc:HGNC:21898]
11. MTDH ENSGALG00000034050 9525 0.808 - - - - - - - 0.808 - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
12. SSRP1 ENSGALG00000007520 18849 0.807 - - - - - - - 0.807 - - structure specific recognition protein 1 [Source:NCBI gene;Acc:396509]
13. MPPED1 ENSGALG00000014186 5726 0.795 - - - - - - - 0.795 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
14. ACOT8 ENSGALG00000006842 2650 0.789 - - - - - - - 0.789 - - acyl-CoA thioesterase 8 [Source:HGNC Symbol;Acc:HGNC:15919]
15. APITD1 APITD1 11830 0.788 - - - - - - - 0.788 - -
16. HS6ST1 ENSGALG00000002155 533 0.78 - - - - - - - - - 0.780 heparan sulfate 6-O-sulfotransferase 1 [Source:NCBI gene;Acc:395141]
17. CREG1 ENSGALG00000040426 1188 0.779 - - - - - 0.779 - - - - cellular repressor of E1A stimulated genes 1 [Source:NCBI gene;Acc:768680]
18. BBS4 ENSGALG00000001798 667 0.779 - - - - - 0.779 - - - - Bardet-Biedl syndrome 4 [Source:NCBI gene;Acc:415318]
19. ATF7IP ENSGALG00000011814 1571 0.778 - - - - - - - - - 0.778 activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
20. MAU2 ENSGALG00000002969 10604 0.776 - - - - - - - 0.776 - - MAU2 sister chromatid cohesion factor [Source:HGNC Symbol;Acc:HGNC:29140]
21. ANKZF1 ENSGALG00000011332 2247 0.776 - - - - - - - 0.776 - - ankyrin repeat and zinc finger domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25527]
22. COQ6 ENSGALG00000010197 3283 0.776 - - - - - - - 0.776 - - coenzyme Q6, monooxygenase [Source:HGNC Symbol;Acc:HGNC:20233]
23. H1F0 ENSGALG00000044240 1206 0.775 - 0.775 - - - - - - - - H1 histone family, member 0 [Source:NCBI gene;Acc:693250]
24. C12H3ORF37 C12H3ORF37 6362 0.774 - - - - - - - 0.774 - -
25. TXNRD3 ENSGALG00000039363 8016 0.772 - - - - - - - 0.772 - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
26. CCDC77 ENSGALG00000012987 1267 0.769 - - - - - - - 0.769 - - coiled-coil domain containing 77 [Source:HGNC Symbol;Acc:HGNC:28203]
27. NOP58 ENSGALG00000008454 34630 0.769 - - - - - - 0.769 - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
28. GMPPB ENSGALG00000002500 9454 0.768 - - - - - - 0.768 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
29. SECISBP2 ENSGALG00000010694 6990 0.768 - - - - - - 0.768 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
30. GNG2 ENSGALG00000027629 9404 0.767 - - - - - - 0.767 - - - G protein subunit gamma 2 [Source:NCBI gene;Acc:423581]
31. NDUFB3 ENSGALG00000008239 15511 0.766 - - - - - - 0.766 - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
32. PPFIA1 ENSGALG00000035774 5258 0.765 - - - - - - - 0.765 - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
33. NELL2 ENSGALG00000009601 4243 0.765 - - - - - - - 0.765 - - neural EGFL like 2 [Source:NCBI gene;Acc:417799]
34. AGA ENSGALG00000010716 2299 0.765 - - - - - - 0.765 - - - aspartylglucosaminidase [Source:NCBI gene;Acc:422558]
35. HIBADH ENSGALG00000033207 3540 0.764 - - - - - - - - - 0.764 3-hydroxyisobutyrate dehydrogenase [Source:NCBI gene;Acc:420632]
36. MID1 ENSGALG00000038504 1684 0.763 - - - - - - - - - 0.763 midline 1 [Source:NCBI gene;Acc:373920]
37. LEPRE1 LEPRE1 156 0.762 - - - - - 0.762 - - - -
38. CAPN15 ENSGALG00000002018 3353 0.761 - - - - - - - 0.761 - - calpain 15 [Source:HGNC Symbol;Acc:HGNC:11182]
39. NEO1 ENSGALG00000001774 10165 0.76 - - - - - - 0.760 - - - neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
40. EIF2B4 ENSGALG00000033575 3801 0.759 - - - - - - 0.759 - - - eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
41. XPO7 ENSGALG00000001838 1875 0.759 - - - - - - - 0.759 - - exportin 7 [Source:NCBI gene;Acc:426925]
42. ENOX2 ENSGALG00000004079 4055 0.757 - - - - - - - 0.757 - - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
43. ZNF830 ENSGALG00000013156 3896 0.757 - - - - - - - 0.757 - - zinc finger protein 830
44. ZNF395 ENSGALG00000034140 1868 0.757 - - - - - - 0.757 - - - zinc finger protein 395 [Source:HGNC Symbol;Acc:HGNC:18737]
45. C26H6ORF89 C26H6ORF89 1826 0.756 - - - - - - - 0.756 - -
46. GABPB1 ENSGALG00000023440 5676 0.755 - - - - - - - 0.755 - - GA binding protein transcription factor beta subunit 1 [Source:NCBI gene;Acc:415453]
47. Sep-09 Sep-09 4723 0.755 - - - - - - - 0.755 - -
48. PCBP4 ENSGALG00000027695 7937 0.754 - - - - - - - 0.754 - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
49. TAF7 4725 0.754 - - - - - - 0.754 - - - TATA-box binding protein associated factor 7, transcript variant X1
50. MAK16 ENSGALG00000001663 7455 0.753 - - - - - - 0.753 - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
51. EP3 EP3 741 0.753 - - - - - - - - - 0.753
52. SLC3A1 ENSGALG00000009973 608 0.753 - - - - - 0.753 - - - - solute carrier family 3 member 1 [Source:HGNC Symbol;Acc:HGNC:11025]
53. NARS ENSGALG00000040506 9506 0.752 - - - - - - - 0.752 - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
54. PDLIM4 ENSGALG00000039872 7823 0.752 - - - - - - - 0.752 - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
55. ZADH2 ENSGALG00000022882 11790 0.751 - - - - - - - 0.751 - - zinc binding alcohol dehydrogenase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28697]
56. UBE2E1 ENSGALG00000011286 5483 0.75 - - - - - - - 0.750 - - ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
57. GSK3B ENSGALG00000014977 7950 0.749 - - - - - - - 0.749 - - glycogen synthase kinase 3 beta [Source:HGNC Symbol;Acc:HGNC:4617]
58. SLCO5A1 ENSGALG00000029842 4510 0.749 - - - - - - - 0.749 - - solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]
59. ZZZ3 ENSGALG00000008988 3132 0.748 - - - - - - 0.748 - - - zinc finger ZZ-type containing 3, transcript variant X5
60. WDR33 ENSGALG00000002043 6340 0.748 - - - - - - - - - 0.748 WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]
61. UBXN2A ENSGALG00000016497 2444 0.747 - - - - - - 0.747 - - - UBX domain protein 2A [Source:NCBI gene;Acc:421973]
62. MRPS2 ENSGALG00000026303 12124 0.747 - - - - - - 0.747 - - - mitochondrial ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:14495]
63. SUCLG2 ENSGALG00000007652 9688 0.747 - - - - - - 0.747 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
64. SEC24C ENSGALG00000005181 11132 0.746 - - - - - - 0.746 - - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]
65. USE1 ENSGALG00000003703 4680 0.746 - - - - - - - - - 0.746 unconventional SNARE in the ER 1 [Source:NCBI gene;Acc:420134]
66. GINS1 ENSGALG00000008538 4786 0.746 - - - - - - - 0.746 - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
67. NR2C1 ENSGALG00000011327 5109 0.745 - - - - - - 0.745 - - - nuclear receptor subfamily 2, group C, member 1 [Source:NCBI gene;Acc:373913]
68. RPE ENSGALG00000002847 7644 0.745 - - - - - - - 0.745 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
69. SNN ENSGALG00000028876 1687 0.744 - - - - - - - - - 0.744 stannin [Source:NCBI gene;Acc:416429]
70. S100A11 ENSGALG00000036711 23454 0.744 - - - - - - - - - 0.744 S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
71. FGF12 ENSGALG00000036971 2631 0.743 - - - - - - - - - 0.743 fibroblast growth factor 12 [Source:NCBI gene;Acc:395704]
72. MRPL39 ENSGALG00000015742 7025 0.743 - - - - - - 0.743 - - - mitochondrial ribosomal protein L39 [Source:HGNC Symbol;Acc:HGNC:14027]
73. CTNND2 ENSGALG00000013001 11217 0.742 - - - - - - 0.742 - - - catenin delta 2 [Source:HGNC Symbol;Acc:HGNC:2516]
74. CHURC1 ENSGALG00000042309 12066 0.74 - - - - - - - - - 0.740 churchill domain containing 1 [Source:NCBI gene;Acc:395448]
75. UBE2Q2 3861 0.74 - - - - - - 0.740 - - - ubiquitin conjugating enzyme E2 Q2, transcript variant X4
76. PXDNL ENSGALG00000036838 548 0.74 - - - - - 0.740 - - - - peroxidasin like, transcript variant X1
77. ENSGALG00000017396 ENSGALG00000017396 9028 0.74 - - - - - 0.740 - - - -
78. SYAP1 ENSGALG00000016548 3347 0.739 - - - - - - 0.739 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
79. NDUFS5 ENSGALG00000003625 27698 0.739 - - - - - - - 0.739 - - NADH:ubiquinone oxidoreductase subunit S5 [Source:HGNC Symbol;Acc:HGNC:7712]
80. VEZT ENSGALG00000011357 2476 0.738 - - - - - - - 0.738 - - vezatin, adherens junctions transmembrane protein [Source:HGNC Symbol;Acc:HGNC:18258]
81. CDK5RAP1 ENSGALG00000006738 2628 0.738 - - - - - - - 0.738 - - CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:HGNC:15880]
82. HARS ENSGALG00000035080 11602 0.737 - - - - - - - 0.737 - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
83. GLI2 ENSGALG00000011630 3347 0.737 - - - - - - - 0.737 - - GLI family zinc finger 2 [Source:NCBI gene;Acc:395956]
84. TM9SF2L ENSGALG00000006487 5566 0.737 - - - - - - 0.737 - - - transmembrane 9 superfamily member 2-like [Source:NCBI gene;Acc:422249]
85. PCGF6 ENSGALG00000008230 1690 0.737 - - - - - - - - - 0.737 polycomb group ring finger 6 [Source:HGNC Symbol;Acc:HGNC:21156]
86. TXNRD2 ENSGALG00000001988 1208 0.736 - - - - - - - - - 0.736 thioredoxin reductase 2 [Source:NCBI gene;Acc:416782]
87. LEMD3 ENSGALG00000009873 347 0.736 - - - - - 0.736 - - - - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
88. SUSD3 ENSGALG00000025886 639 0.735 - 0.735 - - - - - - - - sushi domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28391]
89. NUFIP2 ENSGALG00000004042 1122 0.733 - - - - - - - 0.733 - - NUFIP2, FMR1 interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:17634]
90. DHX38 ENSGALG00000000787 6913 0.733 - - - - - - 0.733 - - - DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
91. TUBB1 ENSGALG00000007447 1202 0.733 - 0.733 - - - - - - - - tubulin beta 1 class VI [Source:NCBI gene;Acc:396427]
92. HYPK ENSGALG00000013916 4900 0.733 - - - - - - 0.733 - - - huntingtin interacting protein K [Source:NCBI gene;Acc:770307]
93. KRR1 ENSGALG00000010227 11783 0.732 - - - - - - 0.732 - - - KRR1, small subunit processome component homolog [Source:NCBI gene;Acc:417863]
94. 7SK_2 7SK_2 1037 0.732 - - - - - - - 0.732 - -
95. RTTN ENSGALG00000013745 855 0.732 - - - - - - 0.732 - - - rotatin [Source:NCBI gene;Acc:421023]
96. TOR2A ENSGALG00000026424 1182 0.73 - - - - - - - 0.730 - - torsin family 2 member A [Source:HGNC Symbol;Acc:HGNC:11996]
97. TRIM59 ENSGALG00000023571 2333 0.73 - - - - - - - 0.730 - - tripartite motif containing 59 [Source:NCBI gene;Acc:425013]
98. RNF11 ENSGALG00000010539 8617 0.73 - - - - - - - 0.730 - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
99. TFDP1 ENSGALG00000016823 17019 0.729 - - - - - - 0.729 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
100. TFB2M ENSGALG00000010651 4374 0.729 - - - - - - - 0.729 - - transcription factor B2, mitochondrial

There are 109 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA