Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URM1

Gene Name Gene ID Reads Annotation
URM1 ENSGALG00000004971 17880 ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]











Genes with expression patterns similar to URM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. URM1 ENSGALG00000004971 17880 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
2. ENSGALG00000028164 ENSGALG00000028164 3325 2.351 - - 0.767 - - - 0.851 0.733 - -
3. CSTF3 ENSGALG00000011685 4711 2.314 - - 0.784 - - - 0.804 0.726 - - cleavage stimulation factor subunit 3 [Source:NCBI gene;Acc:421595]
4. MANF ENSGALG00000002362 7518 2.193 - - 0.741 - - - - 0.745 - 0.707 mesencephalic astrocyte derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:15461]
5. WDR92 ENSGALG00000008760 3934 1.72 - - 0.918 - - - 0.802 - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
6. SQLE ENSGALG00000036915 4172 1.717 - - 0.836 - - - 0.881 - - - squalene epoxidase [Source:NCBI gene;Acc:420335]
7. SELM SELM 6366 1.705 - - 0.865 - - - 0.840 - - -
8. SURF6 ENSGALG00000038413 11178 1.698 - - 0.918 - - - 0.780 - - - surfeit 6 [Source:NCBI gene;Acc:417160]
9. HNRNPLL ENSGALG00000008504 14719 1.695 - - 0.870 - - - 0.825 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
10. SPG11 ENSGALG00000008180 1890 1.69 - - 0.834 - - - 0.856 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
11. TUBA4A ENSGALG00000000433 1367 1.69 - - 0.900 - - - 0.790 - - - tubulin alpha 4a
12. SEC22B ENSGALG00000039704 16080 1.688 - - 0.805 - - - 0.883 - - - SEC22 homolog B, vesicle trafficking protein [Source:NCBI gene;Acc:424377]
13. HTATSF1 ENSGALG00000006410 3526 1.683 - - - - - - 0.875 0.808 - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
14. FAM207A ENSGALG00000007513 8748 1.661 - - - - - - 0.785 0.876 - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
15. SHROOM2 ENSGALG00000030802 4517 1.649 - - 0.814 - - - 0.835 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
16. MAEA ENSGALG00000013310 13230 1.649 - - 0.858 - - - - 0.791 - - macrophage erythroblast attacher [Source:NCBI gene;Acc:426024]
17. COQ7 ENSGALG00000006861 5118 1.649 - - - - - - 0.834 0.815 - - coenzyme Q7, hydroxylase [Source:NCBI gene;Acc:416609]
18. SETD1B ENSGALG00000004324 2897 1.646 - - 0.937 - - - - 0.709 - - SET domain containing 1B [Source:NCBI gene;Acc:416851]
19. PARN ENSGALG00000003091 6363 1.635 - - - - - - 0.837 0.798 - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
20. CHMP4B ENSGALG00000002095 17422 1.631 - - 0.796 - - - - 0.835 - - charged multivesicular body protein 4B [Source:NCBI gene;Acc:419150]
21. ZNF451 ENSGALG00000016282 3380 1.63 - - 0.845 - - - 0.785 - - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
22. PSMD13 ENSGALG00000043684 14720 1.627 - - 0.780 - - - - 0.847 - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
23. GPN3 ENSGALG00000003807 6320 1.623 - - - - - - 0.902 0.721 - - GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:HGNC:30186]
24. PRKACB ENSGALG00000028530 12506 1.621 - - 0.798 - - - - 0.823 - - protein kinase cAMP-activated catalytic subunit beta, transcript variant X2
25. RNF20 ENSGALG00000015548 7199 1.621 - - 0.822 - - - 0.799 - - - ring finger protein 20 [Source:NCBI gene;Acc:427310]
26. PANK1 ENSGALG00000006431 2910 1.62 - - 0.778 - - - - 0.842 - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
27. LPCAT3 ENSGALG00000014570 7919 1.618 - - 0.853 - - - - 0.765 - - lysophosphatidylcholine acyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:30244]
28. PSMD10 ENSGALG00000008287 11380 1.615 - - - - - - 0.773 0.842 - - proteasome 26S subunit, non-ATPase 10 [Source:NCBI gene;Acc:422351]
29. PEMT ENSGALG00000004875 4094 1.606 - - 0.881 - - - - 0.725 - - phosphatidylethanolamine N-methyltransferase [Source:NCBI gene;Acc:416508]
30. AMFR ENSGALG00000003107 6560 1.605 - - 0.847 - - - - 0.758 - - autocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]
31. SNRB SNRB 4477 1.603 - - 0.888 - - - - 0.715 - -
32. NUBP1 ENSGALG00000007241 3791 1.601 - - 0.875 - - - - 0.726 - - nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
33. RIT1 ENSGALG00000014647 7174 1.601 - - - - - - 0.843 0.758 - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
34. PRPF40A ENSGALG00000012526 7724 1.601 - - 0.744 - - - 0.857 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
35. ZCCHC2 ENSGALG00000012889 3163 1.595 - - - - - - 0.824 0.771 - - zinc finger CCHC-type containing 2 [Source:HGNC Symbol;Acc:HGNC:22916]
36. RBBP8 ENSGALG00000014982 3255 1.594 - - 0.865 - - - - - - 0.729 RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
37. COIL ENSGALG00000003158 7806 1.588 - - - - - - 0.760 0.828 - - coilin [Source:HGNC Symbol;Acc:HGNC:2184]
38. PEX10 ENSGALG00000001223 5704 1.587 - - - - - - 0.781 0.806 - - peroxisomal biogenesis factor 10 [Source:NCBI gene;Acc:419396]
39. LGALS1 ENSGALG00000012420 13993 1.586 - - 0.841 - - - - - - 0.745 galectin 1 [Source:NCBI gene;Acc:396491]
40. FLCN ENSGALG00000004816 4101 1.584 - - - - - - 0.880 0.704 - - folliculin, transcript variant X1
41. SLIT2 ENSGALG00000041121 3223 1.58 - - 0.797 - - - 0.783 - - - slit guidance ligand 2 [Source:NCBI gene;Acc:373967]
42. ZFYVE19 ENSGALG00000008460 2750 1.58 - - - - - - 0.849 0.731 - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
43. METTL5 ENSGALG00000009676 3252 1.58 - - 0.829 - - - - 0.751 - - methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]
44. NDC1 ENSGALG00000031606 3094 1.578 - - 0.875 - - - - 0.703 - - NDC1 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:25525]
45. TWSG1 ENSGALG00000008400 1869 1.573 - - 0.873 - - - - - 0.700 - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
46. MBNL1 ENSGALG00000029190 3953 1.572 - - 0.753 - - - 0.819 - - - muscleblind like splicing regulator 1 [Source:NCBI gene;Acc:425033]
47. SPCS2 ENSGALG00000019036 9496 1.57 - - - - - - 0.846 0.724 - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
48. TRAF3IP1 ENSGALG00000004236 7094 1.568 - - 0.853 - - - - 0.715 - - TRAF3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:17861]
49. AMBRA1 ENSGALG00000008358 2865 1.568 - - 0.865 - - - - 0.703 - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
50. MSL3 ENSGALG00000041433 2957 1.565 - - - - - - 0.836 0.729 - - MSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:7370]
51. SLC12A4 ENSGALG00000034179 5674 1.564 - - 0.758 - - - - 0.806 - - solute carrier family 12 member 4 [Source:HGNC Symbol;Acc:HGNC:10913]
52. RPE ENSGALG00000002847 7644 1.564 - - - - - - 0.803 0.761 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
53. ARL2BP ENSGALG00000034102 2700 1.563 - - - - - - 0.840 0.723 - - ADP ribosylation factor like GTPase 2 binding protein [Source:NCBI gene;Acc:426495]
54. TIMMDC1 ENSGALG00000024480 9337 1.561 - - 0.832 - - - - 0.729 - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
55. HELLS ENSGALG00000005451 7094 1.561 - - - - - - 0.843 0.718 - - helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
56. GPC1 ENSGALG00000040316 13364 1.559 - - 0.769 - - - - 0.790 - - glypican 1 [Source:NCBI gene;Acc:424770]
57. NAA16 ENSGALG00000032808 3366 1.559 - - - - - - 0.818 0.741 - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
58. TMEM39B ENSGALG00000003287 4125 1.558 - - - - - - 0.822 0.736 - - transmembrane protein 39B [Source:NCBI gene;Acc:419650]
59. C1H21ORF91 ENSGALG00000028290 5550 1.556 - - - - - - - 0.771 - 0.785 chromosome 1 open reading frame, human C21orf91 [Source:NCBI gene;Acc:395489]
60. ORC4 ENSGALG00000012448 8405 1.552 - - - - - - 0.824 0.728 - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
61. ALDH18A1 ENSGALG00000034655 3038 1.55 - - - - - - 0.834 0.716 - - aldehyde dehydrogenase 18 family member A1, transcript variant X13
62. LYAR ENSGALG00000015000 10756 1.547 - - - - - - 0.838 0.709 - - Ly1 antibody reactive [Source:HGNC Symbol;Acc:HGNC:26021]
63. ODZ3 ODZ3 2213 1.543 - - - - - - - 0.741 - 0.802
64. DDX42 ENSGALG00000000581 8780 1.543 - - 0.811 - - - - 0.732 - - DEAD-box helicase 42 [Source:NCBI gene;Acc:419959]
65. SPCS1 ENSGALG00000001655 7718 1.538 - - 0.780 - - - - 0.758 - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
66. SUV39H2 ENSGALG00000013920 4360 1.538 - - - - - - 0.828 0.710 - - suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
67. INTS7 ENSGALG00000009843 2395 1.535 - - - - - - 0.829 0.706 - - integrator complex subunit 7 [Source:NCBI gene;Acc:421374]
68. RAB3IP ENSGALG00000009959 1652 1.535 - - 0.831 - - - 0.704 - - - RAB3A interacting protein, transcript variant X1
69. C2H6orf52 ENSGALG00000012721 3631 1.529 - - 0.811 - - - - 0.718 - - chromosome 2 C6orf52 homolog [Source:NCBI gene;Acc:420849]
70. SNRNP48 ENSGALG00000013005 1468 1.528 - - - - - - 0.785 - - 0.743 small nuclear ribonucleoprotein U11/U12 subunit 48 [Source:HGNC Symbol;Acc:HGNC:21368]
71. CCNE2 ENSGALG00000040794 1229 1.527 - - - - - - 0.820 0.707 - - cyclin E2 [Source:NCBI gene;Acc:420231]
72. NDC80 ENSGALG00000014801 3237 1.526 - - 0.762 - - - - 0.764 - - NDC80, kinetochore complex component [Source:NCBI gene;Acc:395134]
73. PPFIA1 ENSGALG00000035774 5258 1.523 - - - - - - - 0.793 - 0.730 PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
74. QSER1 ENSGALG00000012030 4490 1.52 - - 0.773 - - - - - - 0.747 glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
75. HINT3 ENSGALG00000044342 5674 1.52 - - 0.799 - - - - 0.721 - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
76. CBLL1 ENSGALG00000038981 6725 1.518 - - 0.799 - - - - 0.719 - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
77. YME1L1 ENSGALG00000007492 8652 1.517 - - - - - - 0.737 0.780 - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
78. BNIP3L ENSGALG00000043405 10316 1.515 - - 0.729 - - - - 0.786 - - BCL2 interacting protein 3 like [Source:NCBI gene;Acc:419522]
79. POMP ENSGALG00000017090 5504 1.512 - - 0.804 - - - - 0.708 - - proteasome maturation protein [Source:HGNC Symbol;Acc:HGNC:20330]
80. ERCC6 ENSGALG00000006254 3452 1.51 - - 0.779 - - - - - - 0.731 ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
81. NSG1 ENSGALG00000015010 5829 1.505 - - - - - - 0.771 0.734 - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
82. SLMO2 SLMO2 9207 1.5 - - - - - - 0.765 0.735 - -
83. TXN2 ENSGALG00000012532 12518 1.499 - - 0.785 - - - - 0.714 - - thioredoxin 2 [Source:NCBI gene;Acc:426978]
84. COQ3 ENSGALG00000015486 3508 1.496 - - 0.787 - - - - 0.709 - - coenzyme Q3, methyltransferase [Source:HGNC Symbol;Acc:HGNC:18175]
85. UFL1 ENSGALG00000015580 3845 1.491 - - 0.716 - - - - 0.775 - - UFM1 specific ligase 1 [Source:NCBI gene;Acc:421804]
86. BRD1 ENSGALG00000029379 6047 1.489 - - - - - - 0.788 0.701 - - bromodomain containing 1 [Source:NCBI gene;Acc:417731]
87. TRAPPC4 ENSGALG00000007707 3568 1.487 - - - - - - 0.731 0.756 - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
88. BZW2 ENSGALG00000010809 29213 1.486 - - 0.718 - - - - 0.768 - - basic leucine zipper and W2 domains 2 [Source:NCBI gene;Acc:420594]
89. ACTR8 ENSGALG00000005385 3647 1.485 - - 0.767 - - - - 0.718 - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
90. RAB5C ENSGALG00000003359 5597 1.481 - - - - - - - 0.775 - 0.706 RAB5C, member RAS oncogene family [Source:NCBI gene;Acc:395197]
91. WSB2 ENSGALG00000008151 13246 1.479 - - 0.764 - - - - 0.715 - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
92. SYS1 ENSGALG00000003929 4487 1.478 - - - - - - 0.765 0.713 - - SYS1, golgi trafficking protein [Source:NCBI gene;Acc:419183]
93. SDF2L1 ENSGALG00000031982 6084 1.474 - - - - - - 0.716 0.758 - - stromal cell derived factor 2 like 1 [Source:HGNC Symbol;Acc:HGNC:10676]
94. SPDL1 ENSGALG00000001942 4403 1.473 - - 0.746 - - - - 0.727 - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
95. RNF219 ENSGALG00000016911 4458 1.471 - - - - - - 0.765 0.706 - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
96. DCTD ENSGALG00000010674 8396 1.47 - - - - - 0.700 - 0.770 - - dCMP deaminase [Source:NCBI gene;Acc:422556]
97. PHACTR4 ENSGALG00000042485 3523 1.466 - - - - - - 0.738 0.728 - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
98. NUMB ENSGALG00000009300 4220 1.461 - - - - - - 0.733 0.728 - - NUMB, endocytic adaptor protein [Source:NCBI gene;Acc:395639]
99. TLK1 ENSGALG00000009569 5446 1.452 - - - - - - 0.741 0.711 - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
100. PSAP ENSGALG00000004769 14759 1.443 - - - - - - 0.743 0.700 - - prosaposin [Source:NCBI gene;Acc:395602]

There are 1132 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA