Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URB1

Gene Name Gene ID Reads Annotation
URB1 ENSGALG00000015887 5854 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]











Genes with expression patterns similar to URB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. URB1 ENSGALG00000015887 5854 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
2. KCTD10 ENSGALG00000005138 1191 1.828 - - 0.832 - - - - 0.996 - - potassium channel tetramerization domain containing 10 [Source:HGNC Symbol;Acc:HGNC:23236]
3. SLC35E1 ENSGALG00000003794 2563 1.799 - - - - - - 0.803 0.996 - - solute carrier family 35 member E1 [Source:HGNC Symbol;Acc:HGNC:20803]
4. CDC45 ENSGALG00000001616 8432 1.768 - - - - - - 0.792 0.976 - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
5. VIMENTIN VIMENTIN 33105 1.738 - - - - - - 0.741 0.997 - -
6. ARL4A ENSGALG00000027757 4285 1.716 - - - - - - 0.726 0.990 - - ADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]
7. MTX2 ENSGALG00000009264 17304 1.709 - - 0.833 - - - - 0.876 - - metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]
8. VATB VATB 13756 1.709 - - - - - - 0.718 0.991 - -
9. MZT1 ENSGALG00000016932 9269 1.696 - - - - - - 0.742 0.954 - - mitotic spindle organizing protein 1 [Source:NCBI gene;Acc:418822]
10. RAE1 ENSGALG00000007653 8930 1.694 - - 0.724 - - - - 0.970 - - ribonucleic acid export 1 [Source:NCBI gene;Acc:419324]
11. IGF2BP1 ENSGALG00000041204 6420 1.674 - - 0.710 - - - - 0.964 - - insulin like growth factor 2 mRNA binding protein 1 [Source:NCBI gene;Acc:395953]
12. TMEM30A ENSGALG00000015904 8533 1.668 - - - - - - 0.761 0.907 - - transmembrane protein 30A [Source:NCBI gene;Acc:421861]
13. PPIC ENSGALG00000005346 5002 1.614 - - - - - - 0.706 0.908 - - peptidylprolyl isomerase C [Source:HGNC Symbol;Acc:HGNC:9256]
14. VPS35 ENSGALG00000004375 8059 1.609 - - - - - - 0.706 0.903 - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
15. AKAP1 ENSGALG00000005575 12051 1.585 - - 0.778 - - - 0.807 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
16. SSR3 ENSGALG00000028683 24334 1.581 - - - - - - 0.739 0.842 - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
17. CHORDC1 ENSGALG00000035461 2439 1.558 - - 0.857 - - - 0.701 - - - cysteine and histidine rich domain containing 1 [Source:NCBI gene;Acc:419009]
18. ATG5 ENSGALG00000015387 7752 1.554 - - 0.727 - - - 0.827 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
19. MCTS1 ENSGALG00000008517 27514 1.537 - - - - - - 0.705 0.832 - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
20. UBR2 ENSGALG00000009906 7717 1.526 - - 0.804 - - - 0.722 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
21. PIGK ENSGALG00000009015 7942 1.526 - - 0.816 - - - 0.710 - - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
22. ASUN ASUN 17129 1.515 - - 0.719 - - - 0.796 - - -
23. THAP5 ENSGALG00000009494 6540 1.514 - - 0.766 - - - 0.748 - - - THAP domain containing 5 [Source:NCBI gene;Acc:417784]
24. TMEM175 ENSGALG00000015368 3342 1.504 - - 0.745 - - - 0.759 - - - transmembrane protein 175 [Source:NCBI gene;Acc:427293]
25. TMEM167A ENSGALG00000027332 13862 1.503 - - 0.777 - - - 0.726 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
26. AHSA1 ENSGALG00000010463 15252 1.502 - - 0.753 - - - 0.749 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
27. LIPA ENSGALG00000006378 4414 1.497 - - 0.782 - - - 0.715 - - - lipase A, lysosomal acid type [Source:HGNC Symbol;Acc:HGNC:6617]
28. PDHA1 ENSGALG00000016430 7070 1.496 - - 0.729 - - - 0.767 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
29. RFK ENSGALG00000033558 1364 1.475 - - 0.769 - - - 0.706 - - - riboflavin kinase, transcript variant X3
30. BAG5 ENSGALG00000031062 4498 1.473 - - 0.750 - - - 0.723 - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
31. NLK ENSGALG00000005699 9066 1.47 - - 0.710 - - - - 0.760 - - nemo like kinase [Source:HGNC Symbol;Acc:HGNC:29858]
32. SMC4 ENSGALG00000009553 15715 1.463 - - 0.705 - - - 0.758 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
33. SPCS3 ENSGALG00000010839 19106 1.461 - - 0.744 - - - 0.717 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
34. BPGM ENSGALG00000013069 4520 1.455 - - 0.702 - - - 0.753 - - - bisphosphoglycerate mutase [Source:NCBI gene;Acc:418172]
35. SPCS1 ENSGALG00000001655 7718 1.452 - - 0.719 - - - 0.733 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
36. PDCD6 ENSGALG00000013400 7611 1.441 - - 0.727 - - - 0.714 - - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
37. ARL6IP1 ENSGALG00000006780 16471 1.428 - - - - - - 0.715 0.713 - - ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:NCBI gene;Acc:416604]
38. PRKRIP1 ENSGALG00000001833 5092 0.998 - - - - - - - 0.998 - - PRKR interacting protein 1 [Source:NCBI gene;Acc:417508]
39. PPP1R21 ENSGALG00000008937 2343 0.997 - - - - - - - 0.997 - - protein phosphatase 1 regulatory subunit 21 [Source:NCBI gene;Acc:421287]
40. EXOC4 ENSGALG00000008477 4684 0.997 - - - - - - - 0.997 - - exocyst complex component 4 [Source:NCBI gene;Acc:416700]
41. KIAA1324L ENSGALG00000030324 1695 0.997 - - - - - - - 0.997 - - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
42. SLC25A15 ENSGALG00000017032 6773 0.997 - - - - - - - 0.997 - - solute carrier family 25 member 15 [Source:NCBI gene;Acc:418886]
43. ACAD8 ENSGALG00000001557 2562 0.997 - - - - - - - 0.997 - - acyl-CoA dehydrogenase family member 8 [Source:NCBI gene;Acc:419739]
44. KIAA1598 KIAA1598 989 0.997 - - - - - - - 0.997 - -
45. COX20 ENSGALG00000027440 5881 0.997 - - - - - - - 0.997 - - COX20, cytochrome c oxidase assembly factor [Source:NCBI gene;Acc:421493]
46. TCTN3 ENSGALG00000010517 3985 0.997 - - - - - - - 0.997 - - tectonic family member 3 [Source:NCBI gene;Acc:100857412]
47. TLK2 ENSGALG00000000410 4690 0.997 - - - - - - - 0.997 - - tousled like kinase 2 [Source:HGNC Symbol;Acc:HGNC:11842]
48. PPP2R3C ENSGALG00000010052 637 0.996 - - - - - - - 0.996 - - protein phosphatase 2 regulatory subunit B''gamma [Source:HGNC Symbol;Acc:HGNC:17485]
49. PDCD2 ENSGALG00000011169 3594 0.996 - - - - - - - 0.996 - - programmed cell death 2 [Source:NCBI gene;Acc:421550]
50. LZTFL1 ENSGALG00000033928 3493 0.996 - - - - - - - 0.996 - - leucine zipper transcription factor like 1 [Source:HGNC Symbol;Acc:HGNC:6741]
51. KCNE3 ENSGALG00000022696 561 0.996 - - - - - - - 0.996 - - potassium voltage-gated channel subfamily E regulatory subunit 3 [Source:HGNC Symbol;Acc:HGNC:6243]
52. PLA2R1 ENSGALG00000011149 1964 0.996 - - - - - - - 0.996 - - phospholipase A2 receptor 1 [Source:NCBI gene;Acc:404304]
53. PKIB ENSGALG00000027036 1663 0.996 - - - - - - - 0.996 - - protein kinase (cAMP-dependent, catalytic) inhibitor beta [Source:NCBI gene;Acc:769402]
54. SLC2A10 ENSGALG00000004498 421 0.996 - - - - - - - 0.996 - - solute carrier family 2 member 10 [Source:HGNC Symbol;Acc:HGNC:13444]
55. ITGA1 ENSGALG00000014891 11378 0.996 - - - - - - - 0.996 - - integrin subunit alpha 1 [Source:NCBI gene;Acc:395951]
56. CDCA9 ENSGALG00000021225 2244 0.995 - - - - - - - 0.995 - - cell division cycle associated 9 [Source:NCBI gene;Acc:415745]
57. SPTAN1 ENSGALG00000004719 20251 0.995 - - - - - - - 0.995 - - spectrin alpha, non-erythrocytic 1 [Source:NCBI gene;Acc:374234]
58. FBN2 ENSGALG00000014686 4538 0.995 - - - - - - - 0.995 - - fibrillin 2 [Source:HGNC Symbol;Acc:HGNC:3604]
59. PUM1 ENSGALG00000042598 9392 0.995 - - - - - - - 0.995 - - pumilio RNA binding family member 1 [Source:NCBI gene;Acc:419554]
60. AMOTL2 5217 0.993 - - - - - - - 0.993 - - angiomotin like 2, transcript variant X3
61. KDELR3 ENSGALG00000032313 4376 0.991 - - - - - - - 0.991 - - KDEL endoplasmic reticulum protein retention receptor 3 [Source:NCBI gene;Acc:418026]
62. MYO1B ENSGALG00000007712 8755 0.988 - - - - - - - 0.988 - - myosin IB [Source:HGNC Symbol;Acc:HGNC:7596]
63. KBTBD2 ENSGALG00000038704 2821 0.979 - - - - - - - 0.979 - - kelch repeat and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21751]
64. DGKD ENSGALG00000001730 4456 0.978 - - - - - - - 0.978 - - diacylglycerol kinase delta [Source:HGNC Symbol;Acc:HGNC:2851]
65. ENSGALG00000004132 ENSGALG00000004132 9287 0.975 - - - - - - - 0.975 - -
66. AATF ENSGALG00000005420 6501 0.973 - - - - - - - 0.973 - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
67. GPATCH2 ENSGALG00000009627 4061 0.967 - - - - - - - 0.967 - - G-patch domain containing 2 [Source:NCBI gene;Acc:421355]
68. STRN ENSGALG00000010580 7561 0.964 - - - - - - - 0.964 - - striatin [Source:HGNC Symbol;Acc:HGNC:11424]
69. KLF10 ENSGALG00000037913 3529 0.961 - - - - - - - 0.961 - - Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]
70. MRPS18A ENSGALG00000010296 11039 0.959 - - - - - - - 0.959 - - mitochondrial ribosomal protein S18A [Source:NCBI gene;Acc:421445]
71. CHMP1A ENSGALG00000006161 4195 0.952 - - - - - - - 0.952 - - charged multivesicular body protein 1A [Source:NCBI gene;Acc:415841]
72. UCH-L1 UCH-L1 12697 0.95 - - - - - - - 0.950 - -
73. CPSF6 ENSGALG00000019355 7634 0.949 - - - - - - - 0.949 - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
74. CYTL1 ENSGALG00000015015 4438 0.946 - - - - - - - 0.946 - - cytokine like 1 [Source:HGNC Symbol;Acc:HGNC:24435]
75. HIBCH ENSGALG00000043307 11990 0.945 - - - - - - - 0.945 - - 3-hydroxyisobutyryl-CoA hydrolase [Source:NCBI gene;Acc:423979]
76. INPP5E ENSGALG00000001964 3580 0.933 - - - - - - - 0.933 - - inositol polyphosphate-5-phosphatase E [Source:HGNC Symbol;Acc:HGNC:21474]
77. CYB5A ENSGALG00000013708 8287 0.928 - - - - - - - 0.928 - - cytochrome b5 type A [Source:NCBI gene;Acc:414798]
78. FAM110A ENSGALG00000046425 5558 0.926 - - - - - - - 0.926 - - family with sequence similarity 110 member A [Source:HGNC Symbol;Acc:HGNC:16188]
79. ORC5 ENSGALG00000008175 3426 0.915 - - - - - - - 0.915 - - origin recognition complex subunit 5 [Source:NCBI gene;Acc:417714]
80. DNAJC1 ENSGALG00000007914 8028 0.911 - - - - - - - 0.911 - - DnaJ heat shock protein family (Hsp40) member C1 [Source:HGNC Symbol;Acc:HGNC:20090]
81. MTHFD1 ENSGALG00000011797 11001 0.908 - - - - - - - 0.908 - - methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 [Source:NCBI gene;Acc:423508]
82. VDAC3 ENSGALG00000041463 21595 0.897 - - - - - - - 0.897 - - voltage dependent anion channel 3, transcript variant X9
83. TBL1X ENSGALG00000040006 28597 0.895 - - - - - - - 0.895 - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
84. MRPL37 ENSGALG00000010761 10596 0.875 - - - - - - 0.875 - - - mitochondrial ribosomal protein L37 [Source:NCBI gene;Acc:772313]
85. MAP3K7 ENSGALG00000015596 15164 0.875 - - - - - - 0.875 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
86. RRP9 ENSGALG00000043359 9747 0.87 - - - - - - - 0.870 - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
87. PITPNB ENSGALG00000005654 21578 0.87 - - - - - - - 0.870 - - phosphatidylinositol transfer protein beta [Source:NCBI gene;Acc:416912]
88. ZNF644 ENSGALG00000034253 28348 0.869 - - - - - - - 0.869 - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
89. BIRC5 ENSGALG00000008713 46856 0.864 - - - - - - - 0.864 - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
90. EFR3A ENSGALG00000039533 3826 0.86 - - - - - - 0.860 - - - EFR3 homolog A [Source:HGNC Symbol;Acc:HGNC:28970]
91. HADH ENSGALG00000016124 18216 0.852 - - - - - - - 0.852 - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
92. RUVBL1 ENSGALG00000005931 9379 0.851 - - - - - - 0.851 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
93. KPNA3 ENSGALG00000017009 17330 0.849 - - - - - - - 0.849 - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
94. AHCY ENSGALG00000033677 35555 0.847 - - - - - - - 0.847 - - adenosylhomocysteinase [Source:HGNC Symbol;Acc:HGNC:343]
95. COL4A5 ENSGALG00000008141 15874 0.844 - - - - - - - 0.844 - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
96. GSTO1 ENSGALG00000008409 7561 0.844 - - - - - - 0.844 - - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
97. RANBP1 ENSGALG00000002107 17715 0.84 - - - - - - 0.840 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
98. SIVA1 ENSGALG00000011619 15130 0.839 - - - - - - 0.839 - - - SIVA1 apoptosis inducing factor [Source:NCBI gene;Acc:423493]
99. INTS2 ENSGALG00000005269 6966 0.837 - - - - - - 0.837 - - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
100. LSM5 ENSGALG00000041625 22307 0.836 - - - - - - 0.836 - - - LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:420751]

There are 662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA