Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URB1

Gene Name Gene ID Reads Annotation
URB1 ENSDARG00000060308 78 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]










Genes with expression patterns similar to URB1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. URB1 ENSDARG00000060308 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
2. FAM150A 14 2 1.000 - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
3. gp1bb ENSDARG00000074441 116 2 1.000 - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
4. GMEB2 ENSDARG00000093240 6 2 1.000 - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
5. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 2 1.000 - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
6. KIF21B ENSDARG00000009733 53 1.985 - - - - - - 1.000 - 0.985 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
7. thbs4a ENSDARG00000102777 625 1.978 - - - - - 1.000 - - 0.978 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
8. sult2st3 ENSDARG00000028367 79 1.962 1.000 - - - - - - - 0.962 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
9. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.952 1.000 - - - - 0.952 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
10. PLCG2 ENSDARG00000068763 11 1.943 1.000 - - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
11. cdk20 ENSDARG00000003867 27 1.939 - - 0.939 - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
12. si:dkey-222f8.6 si:dkey-222f8.6 7 1.928 - 0.979 0.949 - - - - - -
13. si:dkey-21n8.3 si:dkey-21n8.3 5 1.927 1.000 - - - - 0.927 - - -
14. asic2 ENSDARG00000006849 18 1.924 1.000 - - - - - 0.924 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
15. FP016199.1 FP016199.1 43 1.906 - - 0.906 - - - 1.000 - -
16. CABZ01063402.1 CABZ01063402.1 64 1.877 - - 0.938 - - - 0.939 - -
17. BX927314.1 BX927314.1 47 1.853 - - - - - 0.853 1.000 - -
18. itga2.2 ENSDARG00000062974 27 1.843 1.000 - - - - 0.843 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
19. FP236168.1 FP236168.1 150 1.841 1.000 - - - - - - - 0.841
20. BX119963.1 ENSDARG00000096135 28 1.837 1.000 0.837 - - - - - - -
21. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
22. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.799 1.000 - 0.799 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
23. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.797 1.000 - - - - 0.797 - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
24. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.793 1.000 - - - - 0.793 - - -
25. serpine3 ENSDARG00000057108 49 1.763 0.825 - 0.938 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. ccdc169 ENSDARG00000089570 101 1.762 - 0.785 - - - - - - 0.977 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
27. si:rp71-1i20.2 ENSDARG00000043198 113 1.762 - - - - - 0.823 - - 0.939 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
28. rap2ab ENSDARG00000040246 63 1.746 0.746 - - - - - 1.000 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
29. TMEM74B ENSDARG00000078868 45 1.746 0.746 - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
30. GPR116_3 GPR116_3 9 1.735 1.000 - - - - - 0.735 - -
31. vent ENSDARG00000100483 74 1.719 - - 0.792 - - 0.927 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
32. NINJ1 ENSDARG00000103663 43 1.718 - - - - - 1.000 0.718 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
33. eng2a eng2a 186 1.697 - 0.979 - - - - 0.718 - -
34. bicc2 ENSDARG00000076557 77 1.691 - - 0.848 - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
35. zgc:86896 ENSDARG00000090369 839 1.666 - - 0.780 - - - - - 0.886 zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
36. CR388013.3 CR388013.3 45 1.656 - - 0.950 - - 0.706 - - -
37. mroh1 ENSDARG00000016573 287 1.648 - - - - - 0.857 - - 0.791 maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
38. CAPN2 CAPN2 1497 1.637 - - 0.886 - - - - - 0.751
39. pald1b ENSDARG00000039352 66 1.633 - 0.738 0.895 - - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
40. ndufaf7 ENSDARG00000033134 202 1.627 - - - - - 0.704 - - 0.923 NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:ZFIN;Acc:ZDB-GENE-060929-628]
41. cog1 ENSDARG00000105131 35 1.623 - - - - - 0.905 0.718 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
42. prkcha ENSDARG00000018382 43 1.609 0.746 - - - - 0.863 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
43. DOCK10 ENSDARG00000075327 150 1.604 - - - - - - 0.740 - 0.864 dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
44. CABZ01080142.1 CABZ01080142.1 52 1.594 0.886 - - - 0.708 - - - -
45. SUN2 SUN2 86 1.54 - - - - - 0.777 - - 0.763
46. KIF2A_1 ENSDARG00000043571 189 1.519 - - 0.792 - 0.727 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
47. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.512 0.746 - - - - - 0.766 - -
48. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
49. baiap2l2 baiap2l2 30 1 - - - - - - 1.000 - -
50. irf1b ENSDARG00000043249 30 1 - - - - - 1.000 - - - interferon regulatory factor 1b [Source:ZFIN;Acc:ZDB-GENE-041114-13]
51. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
52. rgs9b ENSDARG00000045156, ENSDARG00000111650 77 1 - - - - - - 1.000 - - regulator of G protein signaling 9b [Source:ZFIN;Acc:ZDB-GENE-040426-1708]
53. sele ENSDARG00000009123 122 1 1.000 - - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
54. TSPAN1 ENSDARG00000052027 4 1 - - - - - 1.000 - - - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
55. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
56. CREM_1 CREM_1 9 1 1.000 - - - - - - - -
57. CR847847.1 CR847847.1 0 1 - - - - - - 1.000 - -
58. SCAMP5 SCAMP5 19 1 - - - - - - 1.000 - -
59. erc1a ENSDARG00000009941, ENSDARG00000110965 7 1 1.000 - - - - - - - - ELKS/RAB6-interacting/CAST family member 1a [Source:ZFIN;Acc:ZDB-GENE-091214-5]
60. ppp1r37_1 ENSDARG00000078458 36 1 - - - - - - 1.000 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
61. ENSDARG00000086640 ENSDARG00000086640 3 1 - - - - - - 1.000 - -
62. cart2 ENSDARG00000045832, ENSDARG00000112535 13 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
63. FAM196A 82 1 - - - - - 1.000 - - - family with sequence similarity 196 member A
64. zgc:114041 ENSDARG00000052109 76 1 - - - - - - 1.000 - - zgc:114041 [Source:ZFIN;Acc:ZDB-GENE-050706-122]
65. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
66. CU633848.1 CU633848.1 4 1 - - - - - - 1.000 - -
67. zdhhc12b ENSDARG00000052787 43 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
68. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
69. si:dkey-95p16.1 ENSDARG00000092452 3 1 1.000 - - - - - - - - si:dkey-95p16.1 [Source:ZFIN;Acc:ZDB-GENE-081104-443]
70. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
71. sst3 61 1 - - - - - - 1.000 - - somatostatin 3
72. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
73. klf6b ENSDARG00000038561 27 1 1.000 - - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
74. BX897671.1 BX897671.1 10 1 - - - - - - 1.000 - -
75. scxa ENSDARG00000035695 255 1 1.000 - - - - - - - - scleraxis bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-060503-414]
76. numbl ENSDARG00000101949, ENSDARG00000112946 87 1 - - - - - - 1.000 - - numb homolog (Drosophila)-like [Source:ZFIN;Acc:ZDB-GENE-051113-340]
77. slc6a6b ENSDARG00000098438 7 1 1.000 - - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6b [Source:ZFIN;Acc:ZDB-GENE-030131-3077]
78. BICD1 BICD1 9 1 - - - - - 1.000 - - -
79. cmlc1 ENSDARG00000032976 455 1 1.000 - - - - - - - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
80. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
81. olfcg2 ENSDARG00000101083 8 1 - - - - - 1.000 - - - olfactory receptor C family, g2 [Source:ZFIN;Acc:ZDB-GENE-060503-253]
82. RNF14 ENSDARG00000043905 41 1 1.000 - - - - - - - - ring finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-040625-65]
83. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
84. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
85. AL935186.2 ENSDARG00000097345 6 1 1.000 - - - - - - - -
86. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
87. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - - - - - - 1.000 - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
88. kdm2ba ENSDARG00000036593 96 1 - - - - - - 1.000 - - lysine (K)-specific demethylase 2Ba [Source:ZFIN;Acc:ZDB-GENE-040426-2195]
89. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
90. fam163b ENSDARG00000073914 46 1 1.000 - - - - - - - - family with sequence similarity 163, member B [Source:ZFIN;Acc:ZDB-GENE-091204-96]
91. si:ch211-240g9.1 36 1 - - - - - - 1.000 - - si:ch211-240g9.1
92. BX004785.2 ENSDARG00000093487 10 1 - - - - - - 1.000 - -
93. CR318653.1 ENSDARG00000104557 29 1 - - - - - - 1.000 - -
94. GPR32 GPR32 0 1 - - - - - - 1.000 - -
95. vtg3 ENSDARG00000016448 8 1 - - - - - 1.000 - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
96. NOX4 3 1 - - - - - 1.000 - - - NADPH oxidase 4
97. GPC5 GPC5 11 1 - - - - - - 1.000 - -
98. ddx26b 79 1 1.000 - - - - - - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B, transcript variant X1
99. zgc:153345 ENSDARG00000055622 29 1 - - - - - - 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
100. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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