Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URB1

Gene Name Gene ID Reads Annotation
URB1 ENSDARG00000060308 78 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]










Genes with expression patterns similar to URB1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. URB1 ENSDARG00000060308 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
2. gp1bb ENSDARG00000074441 116 2 1.000 - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
3. FAM150A 14 2 1.000 - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
4. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 2 1.000 - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
5. GMEB2 ENSDARG00000093240 6 2 1.000 - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
6. KIF21B ENSDARG00000009733 53 1.985 - - - - - - 1.000 - 0.985 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
7. thbs4a ENSDARG00000102777 625 1.978 - - - - - 1.000 - - 0.978 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
8. sult2st3 ENSDARG00000028367 79 1.962 1.000 - - - - - - - 0.962 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
9. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.952 1.000 - - - - 0.952 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
10. PLCG2 ENSDARG00000068763 11 1.943 1.000 - - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
11. cdk20 ENSDARG00000003867 27 1.939 - - 0.939 - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
12. si:dkey-222f8.6 si:dkey-222f8.6 7 1.928 - 0.979 0.949 - - - - - -
13. si:dkey-21n8.3 si:dkey-21n8.3 5 1.927 1.000 - - - - 0.927 - - -
14. asic2 ENSDARG00000006849 18 1.924 1.000 - - - - - 0.924 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
15. FP016199.1 FP016199.1 43 1.906 - - 0.906 - - - 1.000 - -
16. CABZ01063402.1 CABZ01063402.1 64 1.877 - - 0.938 - - - 0.939 - -
17. BX927314.1 BX927314.1 47 1.853 - - - - - 0.853 1.000 - -
18. itga2.2 ENSDARG00000062974 27 1.843 1.000 - - - - 0.843 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
19. FP236168.1 FP236168.1 150 1.841 1.000 - - - - - - - 0.841
20. BX119963.1 ENSDARG00000096135 28 1.837 1.000 0.837 - - - - - - -
21. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
22. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.799 1.000 - 0.799 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
23. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.797 1.000 - - - - 0.797 - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
24. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.793 1.000 - - - - 0.793 - - -
25. serpine3 ENSDARG00000057108 49 1.763 0.825 - 0.938 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. ccdc169 ENSDARG00000089570 101 1.762 - 0.785 - - - - - - 0.977 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
27. si:rp71-1i20.2 ENSDARG00000043198 113 1.762 - - - - - 0.823 - - 0.939 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
28. TMEM74B ENSDARG00000078868 45 1.746 0.746 - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
29. rap2ab ENSDARG00000040246 63 1.746 0.746 - - - - - 1.000 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
30. GPR116_3 GPR116_3 9 1.735 1.000 - - - - - 0.735 - -
31. vent ENSDARG00000100483 74 1.719 - - 0.792 - - 0.927 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
32. NINJ1 ENSDARG00000103663 43 1.718 - - - - - 1.000 0.718 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
33. eng2a eng2a 186 1.697 - 0.979 - - - - 0.718 - -
34. bicc2 ENSDARG00000076557 77 1.691 - - 0.848 - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
35. zgc:86896 ENSDARG00000090369 839 1.666 - - 0.780 - - - - - 0.886 zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
36. CR388013.3 CR388013.3 45 1.656 - - 0.950 - - 0.706 - - -
37. mroh1 ENSDARG00000016573 287 1.648 - - - - - 0.857 - - 0.791 maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
38. CAPN2 CAPN2 1497 1.637 - - 0.886 - - - - - 0.751
39. pald1b ENSDARG00000039352 66 1.633 - 0.738 0.895 - - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
40. ndufaf7 ENSDARG00000033134 202 1.627 - - - - - 0.704 - - 0.923 NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:ZFIN;Acc:ZDB-GENE-060929-628]
41. cog1 ENSDARG00000105131 35 1.623 - - - - - 0.905 0.718 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
42. prkcha ENSDARG00000018382 43 1.609 0.746 - - - - 0.863 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
43. DOCK10 ENSDARG00000075327 150 1.604 - - - - - - 0.740 - 0.864 dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
44. CABZ01080142.1 CABZ01080142.1 52 1.594 0.886 - - - 0.708 - - - -
45. SUN2 SUN2 86 1.54 - - - - - 0.777 - - 0.763
46. KIF2A_1 ENSDARG00000043571 189 1.519 - - 0.792 - 0.727 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
47. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.512 0.746 - - - - - 0.766 - -
48. hcrt ENSDARG00000070932 4 1 - - - - - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
49. fhl1a ENSDARG00000071498, ENSDARG00000115132 164 1 1.000 - - - - - - - - four and a half LIM domains 1a [Source:ZFIN;Acc:ZDB-GENE-040206-1]
50. gcsha ENSDARG00000091655, ENSDARG00000111225 1 1 1.000 - - - - - - - - glycine cleavage system protein H (aminomethyl carrier), a [Source:ZFIN;Acc:ZDB-GENE-050320-18]
51. znf423 ENSDARG00000095732 13 1 - - - - - - 1.000 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
52. cdc73 ENSDARG00000020201 22 1 1.000 - - - - - - - - cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1309]
53. CT573356.3 CT573356.3 2 1 - - - - - 1.000 - - -
54. TMBIM1 TMBIM1 2 1 - - - - - - 1.000 - -
55. ALOX5 ALOX5 0 1 - - - - - - 1.000 - -
56. ASPG ENSDARG00000052942 1 1 1.000 - - - - - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
57. dmbx1a ENSDARG00000009922 284 1 1.000 - - - - - - - - diencephalon/mesencephalon homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-020117-1]
58. ciita ENSDARG00000090851 5 1 1.000 - - - - - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
59. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 1.000 - - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
60. mei4 ENSDARG00000043912 10 1 1.000 - - - - - - - - meiosis-specific, MEI4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040724-211]
61. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
62. wu:fb63a08 38 1 - - - - - - 1.000 - - wu:fb63a08
63. CR382327.1 ENSDARG00000088739 56 1 - - - - - - 1.000 - -
64. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
65. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
66. KSR1_1 KSR1_1 1 1 - - - - - - 1.000 - -
67. hoxc9a ENSDARG00000092809 18 1 1.000 - - - - - - - - homeobox C9a [Source:ZFIN;Acc:ZDB-GENE-000328-5]
68. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
69. fam207a_1 ENSDARG00000071500 1 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
70. mapkap1 ENSDARG00000091777 8 1 - - - - - - 1.000 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
71. ovca2 ENSDARG00000103748 38 1 1.000 - - - - - - - - OVCA2, serine hydrolase domain containing [Source:ZFIN;Acc:ZDB-GENE-050522-115]
72. slc10a4 ENSDARG00000009131 51 1 1.000 - - - - - - - - solute carrier family 10, member 4 [Source:ZFIN;Acc:ZDB-GENE-041014-249]
73. zgc:153759 ENSDARG00000068969, ENSDARG00000092381 44 1 - - - - - 1.000 - - - zgc:153759 [Source:ZFIN;Acc:ZDB-GENE-060825-148]
74. csrnp1b ENSDARG00000038429 10 1 1.000 - - - - - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
75. OTOS ENSDARG00000108475 180 1 - - - - - 1.000 - - - otospiralin [Source:ZFIN;Acc:ZDB-GENE-120601-1]
76. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 1 - - - - - - 1.000 - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
77. olfcs2 ENSDARG00000100451 1 1 1.000 - - - - - - - - olfactory receptor C family, s2 [Source:ZFIN;Acc:ZDB-GENE-060503-238]
78. PARM1 ENSDARG00000114063 58 1 1.000 - - - - - - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
79. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
80. si:dkey-157e10.5 si:dkey-157e10.5 1 1 1.000 - - - - - - - -
81. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
82. sele ENSDARG00000009123 122 1 1.000 - - - - - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
83. SOX8 SOX8 22 1 1.000 - - - - - - - -
84. sod3b ENSDARG00000079183 39 1 1.000 - - - - - - - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
85. BX323994.1 ENSDARG00000078927 15 1 - - - - - - 1.000 - - uncharacterized LOC108190035 [Source:NCBI gene;Acc:108190035]
86. myo5ab ENSDARG00000025218 14 1 1.000 - - - - - - - - myosin VAb [Source:ZFIN;Acc:ZDB-GENE-050411-72]
87. uts1 ENSDARG00000014927 35 1 - - - - - 1.000 - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
88. syt15 ENSDARG00000079926 8 1 - - - - - 1.000 - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
89. CCDC134_1 CCDC134_1 200 1 1.000 - - - - - - - -
90. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - - - - 1.000 - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
91. sycp1 ENSDARG00000003904 8 1 1.000 - - - - - - - - synaptonemal complex protein 1 [Source:ZFIN;Acc:ZDB-GENE-040910-6]
92. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - - - 1.000 - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
93. zgc:174700_1 zgc:174700_1 60 1 1.000 - - - - - - - -
94. OSBP2 ENSDARG00000053487 15 1 1.000 - - - - - - - - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
95. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 1.000 - - - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
96. TGFBR2 TGFBR2 2 1 - - - - - 1.000 - - -
97. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
98. tceanc2 ENSDARG00000062919 32 1 - - - - - - 1.000 - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
99. frmd4bb ENSDARG00000076496 18 1 - - - - - - 1.000 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
100. elmod3 ENSDARG00000074742 6 1 - - - - - - 1.000 - - ELMO/CED-12 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-471]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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