Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URB1

Gene Name Gene ID Reads Annotation
URB1 ENSDARG00000060308 78 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]










Genes with expression patterns similar to URB1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. URB1 ENSDARG00000060308 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
2. gp1bb ENSDARG00000074441 116 2 1.000 - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
3. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 2 1.000 - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
4. FAM150A 14 2 1.000 - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
5. GMEB2 ENSDARG00000093240 6 2 1.000 - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
6. KIF21B ENSDARG00000009733 53 1.985 - - - - - - 1.000 - 0.985 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
7. thbs4a ENSDARG00000102777 625 1.978 - - - - - 1.000 - - 0.978 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
8. sult2st3 ENSDARG00000028367 79 1.962 1.000 - - - - - - - 0.962 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
9. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.952 1.000 - - - - 0.952 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
10. PLCG2 ENSDARG00000068763 11 1.943 1.000 - - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
11. cdk20 ENSDARG00000003867 27 1.939 - - 0.939 - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
12. si:dkey-222f8.6 si:dkey-222f8.6 7 1.928 - 0.979 0.949 - - - - - -
13. si:dkey-21n8.3 si:dkey-21n8.3 5 1.927 1.000 - - - - 0.927 - - -
14. asic2 ENSDARG00000006849 18 1.924 1.000 - - - - - 0.924 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
15. FP016199.1 FP016199.1 43 1.906 - - 0.906 - - - 1.000 - -
16. CABZ01063402.1 CABZ01063402.1 64 1.877 - - 0.938 - - - 0.939 - -
17. BX927314.1 BX927314.1 47 1.853 - - - - - 0.853 1.000 - -
18. itga2.2 ENSDARG00000062974 27 1.843 1.000 - - - - 0.843 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
19. FP236168.1 FP236168.1 150 1.841 1.000 - - - - - - - 0.841
20. BX119963.1 ENSDARG00000096135 28 1.837 1.000 0.837 - - - - - - -
21. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
22. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.799 1.000 - 0.799 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
23. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.797 1.000 - - - - 0.797 - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
24. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.793 1.000 - - - - 0.793 - - -
25. serpine3 ENSDARG00000057108 49 1.763 0.825 - 0.938 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. ccdc169 ENSDARG00000089570 101 1.762 - 0.785 - - - - - - 0.977 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
27. si:rp71-1i20.2 ENSDARG00000043198 113 1.762 - - - - - 0.823 - - 0.939 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
28. rap2ab ENSDARG00000040246 63 1.746 0.746 - - - - - 1.000 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
29. TMEM74B ENSDARG00000078868 45 1.746 0.746 - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
30. GPR116_3 GPR116_3 9 1.735 1.000 - - - - - 0.735 - -
31. vent ENSDARG00000100483 74 1.719 - - 0.792 - - 0.927 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
32. NINJ1 ENSDARG00000103663 43 1.718 - - - - - 1.000 0.718 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
33. eng2a eng2a 186 1.697 - 0.979 - - - - 0.718 - -
34. bicc2 ENSDARG00000076557 77 1.691 - - 0.848 - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
35. zgc:86896 ENSDARG00000090369 839 1.666 - - 0.780 - - - - - 0.886 zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
36. CR388013.3 CR388013.3 45 1.656 - - 0.950 - - 0.706 - - -
37. mroh1 ENSDARG00000016573 287 1.648 - - - - - 0.857 - - 0.791 maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
38. CAPN2 CAPN2 1497 1.637 - - 0.886 - - - - - 0.751
39. pald1b ENSDARG00000039352 66 1.633 - 0.738 0.895 - - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
40. ndufaf7 ENSDARG00000033134 202 1.627 - - - - - 0.704 - - 0.923 NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:ZFIN;Acc:ZDB-GENE-060929-628]
41. cog1 ENSDARG00000105131 35 1.623 - - - - - 0.905 0.718 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
42. prkcha ENSDARG00000018382 43 1.609 0.746 - - - - 0.863 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
43. DOCK10 ENSDARG00000075327 150 1.604 - - - - - - 0.740 - 0.864 dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
44. CABZ01080142.1 CABZ01080142.1 52 1.594 0.886 - - - 0.708 - - - -
45. SUN2 SUN2 86 1.54 - - - - - 0.777 - - 0.763
46. KIF2A_1 ENSDARG00000043571 189 1.519 - - 0.792 - 0.727 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
47. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.512 0.746 - - - - - 0.766 - -
48. BICD1 BICD1 9 1 - - - - - 1.000 - - -
49. cx45.6 cx45.6 26 1 1.000 - - - - - - - -
50. lyve1b ENSDARG00000062483 14 1 1.000 - - - - - - - - lymphatic vessel endothelial hyaluronic receptor 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9516]
51. fam207a_1 ENSDARG00000071500 1 1 - - - - - - 1.000 - - family with sequence similarity 207, member A [Source:ZFIN;Acc:ZDB-GENE-060825-113]
52. cog6 ENSDARG00000103149 39 1 - - - - - - 1.000 - - component of oligomeric golgi complex 6 [Source:ZFIN;Acc:ZDB-GENE-040426-909]
53. EHD4 ENSDARG00000054302 46 1 1.000 - - - - - - - - EH-domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060810-22]
54. col28a1 col28a1 5 1 1.000 - - - - - - - -
55. PRICKLE2 PRICKLE2 69 1 - - - - - - 1.000 - -
56. gpsm1a ENSDARG00000092517 784 1 - - - - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
57. NAT14 ENSDARG00000115349 21 1 - - - - - 1.000 - - - N-acetyltransferase 14 (GCN5-related, putative) [Source:ZFIN;Acc:ZDB-GENE-060825-15]
58. zgc:101731 ENSDARG00000040965 27 1 - - - - - - 1.000 - - zgc:101731 [Source:ZFIN;Acc:ZDB-GENE-040912-57]
59. CR847543.1 ENSDARG00000086708 155 1 1.000 - - - - - - - -
60. cyp19a1b ENSDARG00000098360 8 1 1.000 - - - - - - - - cytochrome P450, family 19, subfamily A, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-001103-4]
61. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
62. FAM196B FAM196B 1 1 1.000 - - - - - - - -
63. PEG3_35 PEG3_35 52 1 - - - - - - 1.000 - -
64. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
65. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
66. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]
67. asf1ba ENSDARG00000101037 49 1 - - - - - - 1.000 - - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
68. ZSWIM2 ENSDARG00000075700 8 1 - - - - - - 1.000 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
69. znf423 ENSDARG00000095732 13 1 - - - - - - 1.000 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
70. si:dkey-167i21.2 ENSDARG00000093886 10 1 - - - - - - 1.000 - - si:dkey-167i21.2 [Source:ZFIN;Acc:ZDB-GENE-090313-198]
71. calhm1 ENSDARG00000077021 2 1 1.000 - - - - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
72. cx34.5 ENSDARG00000069411 3 1 1.000 - - - - - - - - connexin 34.5 [Source:ZFIN;Acc:ZDB-GENE-050224-2]
73. frmd4bb ENSDARG00000076496 18 1 - - - - - - 1.000 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
74. POGK POGK 1 1 - - - - - 1.000 - - -
75. BX649394.1 BX649394.1 1 1 - - - - - - 1.000 - -
76. si:ch211-209f23.3 ENSDARG00000095607 15 1 - - - - - - 1.000 - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
77. panx2 ENSDARG00000063019 3 1 - - - - - - 1.000 - - pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
78. BX323793.3 BX323793.3 7 1 - - - - - 1.000 - - -
79. NAGK ENSDARG00000099116 6 1 - - - - - - 1.000 - - N-acetylglucosamine kinase [Source:ZFIN;Acc:ZDB-GENE-070928-19]
80. wbscr27 wbscr27 70 1 - - - - - - 1.000 - -
81. FP236542.1 ENSDARG00000116988 1 1 - - - - - - 1.000 - - alpha-2B adrenergic receptor-like [Source:NCBI gene;Acc:100330650]
82. BX284672.1 BX284672.1 11 1 - - - - - 1.000 - - -
83. si:dkey-230i18.1 si:dkey-230i18.1 3 1 1.000 - - - - - - - -
84. sez6a ENSDARG00000100876 35 1 1.000 - - - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
85. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1 - - - - - - 1.000 - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
86. si:dkeyp-59c12.1 ENSDARG00000038112 186 1 1.000 - - - - - - - - si:dkeyp-59c12.1 [Source:ZFIN;Acc:ZDB-GENE-050419-167]
87. si:ch1073-15f19.2 ENSDARG00000095640 4 1 1.000 - - - - - - - - si:ch1073-15f19.2 [Source:ZFIN;Acc:ZDB-GENE-091204-84]
88. vsig8a ENSDARG00000054050, ENSDARG00000114869 69 1 1.000 - - - - - - - - V-set and immunoglobulin domain containing 8a [Source:ZFIN;Acc:ZDB-GENE-050417-338]
89. BX004785.2 ENSDARG00000093487 10 1 - - - - - - 1.000 - -
90. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
91. cdc42ep2 ENSDARG00000053959 32 1 - - - - - - 1.000 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
92. zgc:172051 ENSDARG00000086569 12 1 1.000 - - - - - - - - zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
93. smpd3 ENSDARG00000098226 1 1 1.000 - - - - - - - - sphingomyelin phosphodiesterase 3, neutral [Source:ZFIN;Acc:ZDB-GENE-081104-280]
94. hcrt ENSDARG00000070932 4 1 - - - - - - 1.000 - - hypocretin (orexin) neuropeptide precursor [Source:ZFIN;Acc:ZDB-GENE-040324-1]
95. SOX8 SOX8 22 1 1.000 - - - - - - - -
96. kif17 ENSDARG00000055238 12 1 - - - - - - 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
97. mapkap1 ENSDARG00000091777 8 1 - - - - - - 1.000 - - mitogen-activated protein kinase associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-041111-178]
98. dnajc28 ENSDARG00000018181, ENSDARG00000114383 134 1 1.000 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 28 [Source:ZFIN;Acc:ZDB-GENE-050417-130]
99. PEG3_21 PEG3_21 2 1 1.000 - - - - - - - -
100. igsf5 igsf5 85 1 - - - - - - 1.000 - -

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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