Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URB1

Gene Name Gene ID Reads Annotation
URB1 ENSDARG00000060308 78 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]










Genes with expression patterns similar to URB1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. URB1 ENSDARG00000060308 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
2. gp1bb ENSDARG00000074441 116 2 1.000 - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
3. FAM150A 14 2 1.000 - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
4. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 2 1.000 - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
5. GMEB2 ENSDARG00000093240 6 2 1.000 - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
6. KIF21B ENSDARG00000009733 53 1.985 - - - - - - 1.000 - 0.985 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
7. thbs4a ENSDARG00000102777 625 1.978 - - - - - 1.000 - - 0.978 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
8. sult2st3 ENSDARG00000028367 79 1.962 1.000 - - - - - - - 0.962 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
9. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.952 1.000 - - - - 0.952 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
10. PLCG2 ENSDARG00000068763 11 1.943 1.000 - - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
11. cdk20 ENSDARG00000003867 27 1.939 - - 0.939 - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
12. si:dkey-222f8.6 si:dkey-222f8.6 7 1.928 - 0.979 0.949 - - - - - -
13. si:dkey-21n8.3 si:dkey-21n8.3 5 1.927 1.000 - - - - 0.927 - - -
14. asic2 ENSDARG00000006849 18 1.924 1.000 - - - - - 0.924 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
15. FP016199.1 FP016199.1 43 1.906 - - 0.906 - - - 1.000 - -
16. CABZ01063402.1 CABZ01063402.1 64 1.877 - - 0.938 - - - 0.939 - -
17. BX927314.1 BX927314.1 47 1.853 - - - - - 0.853 1.000 - -
18. itga2.2 ENSDARG00000062974 27 1.843 1.000 - - - - 0.843 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
19. FP236168.1 FP236168.1 150 1.841 1.000 - - - - - - - 0.841
20. BX119963.1 ENSDARG00000096135 28 1.837 1.000 0.837 - - - - - - -
21. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
22. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.799 1.000 - 0.799 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
23. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.797 1.000 - - - - 0.797 - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
24. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.793 1.000 - - - - 0.793 - - -
25. serpine3 ENSDARG00000057108 49 1.763 0.825 - 0.938 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. ccdc169 ENSDARG00000089570 101 1.762 - 0.785 - - - - - - 0.977 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
27. si:rp71-1i20.2 ENSDARG00000043198 113 1.762 - - - - - 0.823 - - 0.939 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
28. rap2ab ENSDARG00000040246 63 1.746 0.746 - - - - - 1.000 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
29. TMEM74B ENSDARG00000078868 45 1.746 0.746 - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
30. GPR116_3 GPR116_3 9 1.735 1.000 - - - - - 0.735 - -
31. vent ENSDARG00000100483 74 1.719 - - 0.792 - - 0.927 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
32. NINJ1 ENSDARG00000103663 43 1.718 - - - - - 1.000 0.718 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
33. eng2a eng2a 186 1.697 - 0.979 - - - - 0.718 - -
34. bicc2 ENSDARG00000076557 77 1.691 - - 0.848 - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
35. zgc:86896 ENSDARG00000090369 839 1.666 - - 0.780 - - - - - 0.886 zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
36. CR388013.3 CR388013.3 45 1.656 - - 0.950 - - 0.706 - - -
37. mroh1 ENSDARG00000016573 287 1.648 - - - - - 0.857 - - 0.791 maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
38. CAPN2 CAPN2 1497 1.637 - - 0.886 - - - - - 0.751
39. pald1b ENSDARG00000039352 66 1.633 - 0.738 0.895 - - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
40. ndufaf7 ENSDARG00000033134 202 1.627 - - - - - 0.704 - - 0.923 NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:ZFIN;Acc:ZDB-GENE-060929-628]
41. cog1 ENSDARG00000105131 35 1.623 - - - - - 0.905 0.718 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
42. prkcha ENSDARG00000018382 43 1.609 0.746 - - - - 0.863 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
43. DOCK10 ENSDARG00000075327 150 1.604 - - - - - - 0.740 - 0.864 dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
44. CABZ01080142.1 CABZ01080142.1 52 1.594 0.886 - - - 0.708 - - - -
45. SUN2 SUN2 86 1.54 - - - - - 0.777 - - 0.763
46. KIF2A_1 ENSDARG00000043571 189 1.519 - - 0.792 - 0.727 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
47. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.512 0.746 - - - - - 0.766 - -
48. syndig1l ENSDARG00000042390, ENSDARG00000113400 17 1 - - - - - 1.000 - - - synapse differentiation inducing 1-like [Source:ZFIN;Acc:ZDB-GENE-041001-116]
49. ankdd1a ENSDARG00000098647 8 1 - - - - - - 1.000 - - ankyrin repeat and death domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-070615-8]
50. CNTD1 2 1 1.000 - - - - - - - - cyclin N-terminal domain containing 1
51. klf6b ENSDARG00000038561 27 1 1.000 - - - - - - - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
52. ulk3 ENSDARG00000101661 69 1 - - - - - - 1.000 - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
53. si:ch211-117m22.2 si:ch211-117m22.2 60 1 1.000 - - - - - - - -
54. GPR32 GPR32 0 1 - - - - - - 1.000 - -
55. zgc:154055 ENSDARG00000103924 452 1 1.000 - - - - - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
56. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 1.000 - - - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
57. epb41l3b ENSDARG00000019917 9 1 1.000 - - - - - - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
58. v2rh11 ENSDARG00000115088 1 1 - - - - - 1.000 - - - vomeronasal 2 receptor, h11 [Source:ZFIN;Acc:ZDB-GENE-050419-222]
59. slc1a2a ENSDARG00000052138 5 1 1.000 - - - - - - - - solute carrier family 1 (glial high affinity glutamate transporter), member 2a [Source:ZFIN;Acc:ZDB-GENE-100422-11]
60. si:dkeyp-46h3.4 si:dkeyp-46h3.4 1 1 1.000 - - - - - - - -
61. si:ch211-255i3.4 ENSDARG00000095152 7 1 1.000 - - - - - - - - si:ch211-255i3.4 [Source:ZFIN;Acc:ZDB-GENE-100922-237]
62. sdk1b ENSDARG00000062854 16 1 1.000 - - - - - - - - sidekick cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-090311-17]
63. zgc:92275 ENSDARG00000034048 9 1 - - - - - - 1.000 - - zgc:92275 [Source:ZFIN;Acc:ZDB-GENE-040718-356]
64. si:dkey-10f21.16 si:dkey-10f21.16 252 1 - - - - - - 1.000 - -
65. rnf17 ENSDARG00000056387, ENSDARG00000113359 36 1 1.000 - - - - - - - - ring finger protein 17 [Source:ZFIN;Acc:ZDB-GENE-030131-6451]
66. v2ra20 ENSDARG00000094862 0 1 - - - - - - 1.000 - - vomeronasal 2 receptor, a20 [Source:ZFIN;Acc:ZDB-GENE-050419-220]
67. slc25a19 ENSDARG00000100385 2 1 - - - - - 1.000 - - - solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19 [Source:ZFIN;Acc:ZDB-GENE-050417-292]
68. clic2 ENSDARG00000010625, ENSDARG00000110125, ENSDARG00000115320 273 1 1.000 - - - - - - - - chloride intracellular channel 2 [Source:ZFIN;Acc:ZDB-GENE-040718-299]
69. ripply2 ENSDARG00000070535 18 1 - - - - - 1.000 - - - ripply transcriptional repressor 2 [Source:ZFIN;Acc:ZDB-GENE-060113-2]
70. BX571739.1 BX571739.1 45 1 1.000 - - - - - - - -
71. ppp1r37_1 ENSDARG00000078458 36 1 - - - - - - 1.000 - - protein phosphatase 1, regulatory subunit 37 [Source:ZFIN;Acc:ZDB-GENE-050208-7]
72. TSPAN2 TSPAN2 3 1 - - - - - - 1.000 - -
73. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - 1.000 - -
74. ano6 ENSDARG00000061544 21 1 1.000 - - - - - - - - anoctamin 6 [Source:ZFIN;Acc:ZDB-GENE-081104-64]
75. fhit_1 ENSDARG00000078195 91 1 - - - - - - 1.000 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
76. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
77. HMGXB3 ENSDARG00000077823 2 1 - - - - - 1.000 - - - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
78. pla2g15 ENSDARG00000103271 4 1 1.000 - - - - - - - - phospholipase A2, group XV [Source:ZFIN;Acc:ZDB-GENE-030131-6948]
79. brpf3 brpf3 15 1 1.000 - - - - - - - -
80. CELA1_2 CELA1_2 2 1 - - - - - 1.000 - - -
81. si:ch211-219a15.4 ENSDARG00000068951 3 1 1.000 - - - - - - - - si:ch211-219a15.4 [Source:ZFIN;Acc:ZDB-GENE-060503-308]
82. acoxl ENSDARG00000020149 14 1 - - - - - - 1.000 - - acyl-CoA oxidase-like [Source:ZFIN;Acc:ZDB-GENE-081107-18]
83. zgc:173702_1 ENSDARG00000110229 24 1 - - - - - - 1.000 - - zgc:173702 [Source:ZFIN;Acc:ZDB-GENE-080208-3]
84. mmachc ENSDARG00000043877 29 1 1.000 - - - - - - - - methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria [Source:ZFIN;Acc:ZDB-GENE-030131-3167]
85. loxhd1b ENSDARG00000074638 6 1 1.000 - - - - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
86. BX897671.1 BX897671.1 10 1 - - - - - - 1.000 - -
87. zgc:110353 ENSDARG00000039443 80 1 - - - - - - 1.000 - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
88. tbx5b ENSDARG00000092060 37 1 1.000 - - - - - - - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
89. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
90. fgf24 ENSDARG00000037677 242 1 1.000 - - - - - - - - fibroblast growth factor 24 [Source:ZFIN;Acc:ZDB-GENE-030708-1]
91. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - 1.000 - -
92. CMA1_8 CMA1_8 10 1 - - - - - 1.000 - - -
93. m17 ENSDARG00000035435 28 1 - - - - - 1.000 - - - IL-6 subfamily cytokine M17 [Source:ZFIN;Acc:ZDB-GENE-060526-368]
94. AL954698.2 ENSDARG00000102132 28 1 - - - - - - 1.000 - -
95. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
96. FAM196B FAM196B 1 1 1.000 - - - - - - - -
97. PEG3_35 PEG3_35 52 1 - - - - - - 1.000 - -
98. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
99. NMI 3 1 - - - - - 1.000 - - - N-myc (and STAT) interactor
100. BX324142.1 ENSDARG00000114711 1 1 1.000 - - - - - - - - proline-rich receptor-like protein kinase PERK8 [Source:NCBI gene;Acc:101884110]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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