Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for URB1

Gene Name Gene ID Reads Annotation
URB1 ENSDARG00000060308 78 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]










Genes with expression patterns similar to URB1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. URB1 ENSDARG00000060308 78 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5181]
2. zgc:153157 ENSDARG00000070423, ENSDARG00000115488 79 2 1.000 - - - - - 1.000 - - zgc:153157 [Source:ZFIN;Acc:ZDB-GENE-060825-224]
3. GMEB2 ENSDARG00000093240 6 2 1.000 - - - - 1.000 - - - glucocorticoid modulatory element binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4371]
4. FAM150A 14 2 1.000 - - - - - 1.000 - - family with sequence similarity 150 member A, transcript variant X2
5. gp1bb ENSDARG00000074441 116 2 1.000 - - - - 1.000 - - - glycoprotein Ib platelet subunit beta [Source:ZFIN;Acc:ZDB-GENE-081104-406]
6. KIF21B ENSDARG00000009733 53 1.985 - - - - - - 1.000 - 0.985 kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
7. thbs4a ENSDARG00000102777 625 1.978 - - - - - 1.000 - - 0.978 thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
8. sult2st3 ENSDARG00000028367 79 1.962 1.000 - - - - - - - 0.962 sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
9. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1.952 1.000 - - - - 0.952 - - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
10. PLCG2 ENSDARG00000068763 11 1.943 1.000 - - - - 0.943 - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
11. cdk20 ENSDARG00000003867 27 1.939 - - 0.939 - - - 1.000 - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
12. si:dkey-222f8.6 si:dkey-222f8.6 7 1.928 - 0.979 0.949 - - - - - -
13. si:dkey-21n8.3 si:dkey-21n8.3 5 1.927 1.000 - - - - 0.927 - - -
14. asic2 ENSDARG00000006849 18 1.924 1.000 - - - - - 0.924 - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
15. FP016199.1 FP016199.1 43 1.906 - - 0.906 - - - 1.000 - -
16. CABZ01063402.1 CABZ01063402.1 64 1.877 - - 0.938 - - - 0.939 - -
17. BX927314.1 BX927314.1 47 1.853 - - - - - 0.853 1.000 - -
18. itga2.2 ENSDARG00000062974 27 1.843 1.000 - - - - 0.843 - - - integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-091118-70]
19. FP236168.1 FP236168.1 150 1.841 1.000 - - - - - - - 0.841
20. BX119963.1 ENSDARG00000096135 28 1.837 1.000 0.837 - - - - - - -
21. kcnh3 ENSDARG00000069560 4 1.802 0.802 - - - - 1.000 - - - potassium voltage-gated channel, subfamily H (eag-related), member 3 [Source:ZFIN;Acc:ZDB-GENE-070912-23]
22. scn4bb ENSDARG00000060319, ENSDARG00000112427 63 1.799 1.000 - 0.799 - - - - - - sodium channel, voltage-gated, type IV, beta b [Source:ZFIN;Acc:ZDB-GENE-031116-71]
23. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.797 1.000 - - - - 0.797 - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
24. si:dkey-177p2.15p si:dkey-177p2.15p 20 1.793 1.000 - - - - 0.793 - - -
25. serpine3 ENSDARG00000057108 49 1.763 0.825 - 0.938 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
26. si:rp71-1i20.2 ENSDARG00000043198 113 1.762 - - - - - 0.823 - - 0.939 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
27. ccdc169 ENSDARG00000089570 101 1.762 - 0.785 - - - - - - 0.977 coiled-coil domain containing 169 [Source:ZFIN;Acc:ZDB-GENE-091204-29]
28. rap2ab ENSDARG00000040246 63 1.746 0.746 - - - - - 1.000 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
29. TMEM74B ENSDARG00000078868 45 1.746 0.746 - - - - - 1.000 - - transmembrane protein 74B [Source:ZFIN;Acc:ZDB-GENE-120120-1]
30. GPR116_3 GPR116_3 9 1.735 1.000 - - - - - 0.735 - -
31. vent ENSDARG00000100483 74 1.719 - - 0.792 - - 0.927 - - - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
32. NINJ1 ENSDARG00000103663 43 1.718 - - - - - 1.000 0.718 - - ninjurin 1 [Source:HGNC Symbol;Acc:HGNC:7824]
33. eng2a eng2a 186 1.697 - 0.979 - - - - 0.718 - -
34. bicc2 ENSDARG00000076557 77 1.691 - - 0.848 - - - 0.843 - - bicaudal C homolog 2 [Source:ZFIN;Acc:ZDB-GENE-110110-3]
35. zgc:86896 ENSDARG00000090369 839 1.666 - - 0.780 - - - - - 0.886 zgc:86896 [Source:ZFIN;Acc:ZDB-GENE-040625-80]
36. CR388013.3 CR388013.3 45 1.656 - - 0.950 - - 0.706 - - -
37. mroh1 ENSDARG00000016573 287 1.648 - - - - - 0.857 - - 0.791 maestro heat-like repeat family member 1 [Source:ZFIN;Acc:ZDB-GENE-090806-2]
38. CAPN2 CAPN2 1497 1.637 - - 0.886 - - - - - 0.751
39. pald1b ENSDARG00000039352 66 1.633 - 0.738 0.895 - - - - - - phosphatase domain containing, paladin 1b [Source:ZFIN;Acc:ZDB-GENE-070424-88]
40. ndufaf7 ENSDARG00000033134 202 1.627 - - - - - 0.704 - - 0.923 NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:ZFIN;Acc:ZDB-GENE-060929-628]
41. cog1 ENSDARG00000105131 35 1.623 - - - - - 0.905 0.718 - - component of oligomeric golgi complex 1 [Source:ZFIN;Acc:ZDB-GENE-050302-128]
42. prkcha ENSDARG00000018382 43 1.609 0.746 - - - - 0.863 - - - protein kinase C, eta, a [Source:ZFIN;Acc:ZDB-GENE-080402-5]
43. DOCK10 ENSDARG00000075327 150 1.604 - - - - - - 0.740 - 0.864 dedicator of cytokinesis 10 [Source:ZFIN;Acc:ZDB-GENE-130530-773]
44. CABZ01080142.1 CABZ01080142.1 52 1.594 0.886 - - - 0.708 - - - -
45. SUN2 SUN2 86 1.54 - - - - - 0.777 - - 0.763
46. KIF2A_1 ENSDARG00000043571 189 1.519 - - 0.792 - 0.727 - - - - kinesin family member 2A [Source:HGNC Symbol;Acc:HGNC:6318]
47. si:dkeyp-68b7.6 si:dkeyp-68b7.6 7 1.512 0.746 - - - - - 0.766 - -
48. adam10b ENSDARG00000015502 26 1 1.000 - - - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
49. gpsm1a ENSDARG00000092517 784 1 - - - - - - 1.000 - - G protein signaling modulator 1a [Source:ZFIN;Acc:ZDB-GENE-060526-302]
50. CABZ01117437.1 CABZ01117437.1 11 1 - - - - - - 1.000 - -
51. si:dkey-199m13.6 si:dkey-199m13.6 53 1 1.000 - - - - - - - -
52. FP236542.1 ENSDARG00000116988 1 1 - - - - - - 1.000 - - alpha-2B adrenergic receptor-like [Source:NCBI gene;Acc:100330650]
53. HTR1E 103 1 1.000 - - - - - - - - 5-hydroxytryptamine receptor 1E
54. si:zfos-979f1.2 ENSDARG00000011652 24 1 1.000 - - - - - - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
55. ppm1f ENSDARG00000005786, ENSDARG00000109839 25 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1F [Source:ZFIN;Acc:ZDB-GENE-051128-2]
56. TGFBR3L TGFBR3L 16 1 1.000 - - - - - - - -
57. C12H16orf93 C12H16orf93 1 1 - - - - - 1.000 - - -
58. BX119910.6 BX119910.6 11 1 1.000 - - - - - - - -
59. CU694374.3 CU694374.3 28 1 1.000 - - - - - - - -
60. PEG3_35 PEG3_35 52 1 - - - - - - 1.000 - -
61. ifit2 ifit2 11 1 1.000 - - - - - - - -
62. GPR32 GPR32 0 1 - - - - - - 1.000 - -
63. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 1 1.000 - - - - - - - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
64. TAF4_1 TAF4_1 30 1 1.000 - - - - - - - -
65. si:ch211-119o8.4 ENSDARG00000075562 1 1 1.000 - - - - - - - - si:ch211-119o8.4 [Source:ZFIN;Acc:ZDB-GENE-070912-15]
66. si:dkey-162b3.5 si:dkey-162b3.5 24 1 - - - - - - 1.000 - -
67. si:ch73-111m19.2 ENSDARG00000003077 43 1 1.000 - - - - - - - - si:ch73-111m19.2 [Source:ZFIN;Acc:ZDB-GENE-130603-13]
68. ttc22 ENSDARG00000077836 21 1 1.000 - - - - - - - - tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
69. BX649394.1 BX649394.1 1 1 - - - - - - 1.000 - -
70. Metazoa_SRP_24 Metazoa_SRP_24 4 1 1.000 - - - - - - - -
71. il17c ENSDARG00000057180, ENSDARG00000109701 3 1 - - - - - 1.000 - - - interleukin 17c [Source:ZFIN;Acc:ZDB-GENE-061031-5]
72. tacr2 ENSDARG00000074509, ENSDARG00000109849, ENSDARG00000112566 4 1 - - - - - - 1.000 - - tachykinin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090312-188]
73. ubxn10 ENSDARG00000052535 24 1 1.000 - - - - - - - - UBX domain protein 10 [Source:ZFIN;Acc:ZDB-GENE-060825-319]
74. si:ch1073-160m15.1 si:ch1073-160m15.1 74 1 1.000 - - - - - - - -
75. zgc:163061 ENSDARG00000075538, ENSDARG00000076766 54 1 - - - - - - 1.000 - - zgc:163061 [Source:ZFIN;Acc:ZDB-GENE-070410-132]
76. CLDN20 26 1 - - - - - - 1.000 - - claudin 20, transcript variant X2
77. irak1 ENSDARG00000025949 19 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 1 [Source:ZFIN;Acc:ZDB-GENE-071116-5]
78. CABZ01069081.1 CABZ01069081.1 16 1 1.000 - - - - - - - -
79. CU695076.1 CU695076.1 7 1 1.000 - - - - - - - -
80. upp1 ENSDARG00000040869 2 1 1.000 - - - - - - - - uridine phosphorylase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-2]
81. PLCB2 3 1 1.000 - - - - - - - - phospholipase C, beta 2
82. CU984579.1 ENSDARG00000116863 15 1 1.000 - - - - - - - - leucine-rich repeat neuronal protein 4-like [Source:NCBI gene;Acc:564748]
83. ulk3 ENSDARG00000101661 69 1 - - - - - - 1.000 - - unc-51 like kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070410-33]
84. rhobtb2b ENSDARG00000089340 4 1 - - - - - 1.000 - - - Rho related BTB domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-071125-1]
85. fhit_1 ENSDARG00000078195 91 1 - - - - - - 1.000 - - fragile histidine triad gene [Source:ZFIN;Acc:ZDB-GENE-040426-1703]
86. fam166b ENSDARG00000100292 14 1 - - - - - 1.000 - - - family with sequence similarity 166, member B [Source:ZFIN;Acc:ZDB-GENE-070209-41]
87. hbl2 ENSDARG00000094681, ENSDARG00000115699 146 1 1.000 - - - - - - - - hexose-binding lectin 2 [Source:ZFIN;Acc:ZDB-GENE-070912-286]
88. ZBED1_5 ZBED1_5 1 1 1.000 - - - - - - - -
89. brinp3b ENSDARG00000075352 14 1 - - - - - - 1.000 - - bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
90. CABZ01084273.1 CABZ01084273.1 16 1 - - - - - 1.000 - - -
91. zgc:153345 ENSDARG00000055622 29 1 - - - - - - 1.000 - - zgc:153345 [Source:ZFIN;Acc:ZDB-GENE-061103-487]
92. abcg2b ENSDARG00000079361, ENSDARG00000110043 11 1 - - - - - - 1.000 - - ATP-binding cassette, sub-family G (WHITE), member 2b [Source:ZFIN;Acc:ZDB-GENE-050517-36]
93. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 1.000 - - - - - - - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
94. frmd4bb ENSDARG00000076496 18 1 - - - - - - 1.000 - - FERM domain containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-100921-74]
95. si:ch211-117l17.4 ENSDARG00000103534 24 1 - - - - - 1.000 - - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
96. ZSWIM2 ENSDARG00000075700 8 1 - - - - - - 1.000 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
97. zdhhc12b ENSDARG00000052787 43 1 - - - - - - 1.000 - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
98. or115-12 ENSDARG00000044748 2 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 12 [Source:ZFIN;Acc:ZDB-GENE-070806-13]
99. ARHGAP17 ARHGAP17 29 1 1.000 - - - - - - - -
100. sdk1b ENSDARG00000062854 16 1 1.000 - - - - - - - - sidekick cell adhesion molecule 1b [Source:ZFIN;Acc:ZDB-GENE-090311-17]

There are 1273 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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