Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UQCRC1

Gene Name Gene ID Reads Annotation
UQCRC1 ENSGALG00000005789 23201 ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]











Genes with expression patterns similar to UQCRC1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UQCRC1 ENSGALG00000005789 23201 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
2. RAD21 ENSGALG00000029523 25658 1.63 - - - - - - 0.872 0.758 - - RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
3. PALLD ENSGALG00000009650 10803 1.588 - - 0.752 - - - 0.836 - - - palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]
4. ATP5F1 80590 1.582 - - 0.799 - - - 0.783 - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit B1
5. FAT1 ENSGALG00000013579 6030 1.555 - - 0.812 - - - - 0.743 - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
6. ST5 6869 1.547 - - 0.835 - - - 0.712 - - - suppression of tumorigenicity 5, transcript variant X1
7. PHAX ENSGALG00000014691 8114 1.535 - - - - - - 0.791 0.744 - - phosphorylated adaptor for RNA export [Source:NCBI gene;Acc:427124]
8. PSMD3 ENSGALG00000033162 25615 1.517 - - - - - - 0.785 0.732 - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
9. RFC5 ENSGALG00000026517 26113 1.516 - - - - 0.705 - 0.811 - - - replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]
10. INTS2 ENSGALG00000005269 6966 1.509 - - - - - - 0.767 0.742 - - integrator complex subunit 2 [Source:NCBI gene;Acc:417640]
11. TTYH2 ENSGALG00000026940 15628 1.506 - - 0.728 - - - 0.778 - - - tweety family member 2 [Source:HGNC Symbol;Acc:HGNC:13877]
12. PTK7 ENSGALG00000008609 8081 1.504 - - - - - - 0.761 0.743 - - protein tyrosine kinase 7 (inactive) [Source:NCBI gene;Acc:421257]
13. RAB10 ENSGALG00000016535 5272 1.502 - - 0.768 - - - 0.734 - - - RAB10, member RAS oncogene family [Source:NCBI gene;Acc:421994]
14. MAP4K3 ENSGALG00000039720 5124 1.502 - - 0.782 - - - - 0.720 - - mitogen-activated protein kinase kinase kinase kinase 3, transcript variant X10
15. CTBP1 ENSGALG00000039942 9383 1.492 - - 0.790 - - - 0.702 - - - C-terminal binding protein 1 [Source:NCBI gene;Acc:422904]
16. USP30 ENSGALG00000040265 2000 1.484 - - - - - - 0.738 0.746 - - ubiquitin specific peptidase 30 [Source:HGNC Symbol;Acc:HGNC:20065]
17. KLHDC2 ENSGALG00000012244 12903 1.461 - - - - - - 0.725 0.736 - - kelch domain containing 2 [Source:NCBI gene;Acc:423569]
18. IREB2 ENSGALG00000035462 10659 1.454 - - 0.733 - - - 0.721 - - - iron responsive element binding protein 2 [Source:NCBI gene;Acc:427490]
19. MRPL47 ENSGALG00000013759 9044 1.443 - - - - 0.701 - 0.742 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
20. ZNF503 ENSGALG00000041935 2895 1.44 - - 0.702 - - - 0.738 - - - zinc finger protein 503 [Source:HGNC Symbol;Acc:HGNC:23589]
21. WASF1 ENSGALG00000015066 5628 1.438 - - - - 0.706 - 0.732 - - - WAS protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12732]
22. CPSF4 ENSGALG00000004714 14353 1.435 - - - - - - 0.731 0.704 - - cleavage and polyadenylation specific factor 4 [Source:NCBI gene;Acc:416494]
23. MCTS1 ENSGALG00000008517 27514 0.916 - - - - - - 0.916 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
24. SRRM1 ENSGALG00000001283 23820 0.91 - - - - - - 0.910 - - - serine and arginine repetitive matrix 1 [Source:NCBI gene;Acc:428216]
25. RBBP4 ENSGALG00000003522 72455 0.904 - - - - - - 0.904 - - - RB binding protein 4, chromatin remodeling factor [Source:NCBI gene;Acc:395658]
26. LMAN1 ENSGALG00000034821 12788 0.894 - - - - - - 0.894 - - - lectin, mannose binding 1 [Source:NCBI gene;Acc:426849]
27. GLRX3 ENSGALG00000010464 22578 0.887 - - - - - - 0.887 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
28. WDR61 ENSGALG00000003221 11352 0.887 - - - - - - 0.887 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
29. GHITM ENSGALG00000021262 7159 0.885 - - 0.885 - - - - - - - growth hormone inducible transmembrane protein [Source:NCBI gene;Acc:423621]
30. GSPT1 15580 0.883 - - - - - - 0.883 - - - G1 to S phase transition 1, transcript variant X1
31. TMEM115 ENSGALG00000026965 13050 0.882 - - - - - - 0.882 - - - transmembrane protein 115 [Source:HGNC Symbol;Acc:HGNC:30055]
32. RRP9 ENSGALG00000043359 9747 0.879 - - - - - - 0.879 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
33. KDM5B ENSGALG00000038948 50645 0.878 - - - - - - 0.878 - - - lysine demethylase 5B [Source:NCBI gene;Acc:421168]
34. CASP3 ENSGALG00000010638 11572 0.876 - - - - - - 0.876 - - - caspase 3 [Source:NCBI gene;Acc:395476]
35. SRSF6 ENSGALG00000000990 12424 0.875 - - - - - - 0.875 - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
36. WTAP ENSGALG00000011660 10811 0.874 - - - - - - 0.874 - - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
37. TOMM20 ENSGALG00000035299 23431 0.873 - - - - - - 0.873 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
38. TLK1 ENSGALG00000009569 5446 0.872 - - - - - - 0.872 - - - tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]
39. SBNO1 ENSGALG00000003392 6731 0.87 - - - - - - 0.870 - - - strawberry notch homolog 1 [Source:NCBI gene;Acc:427694]
40. STRN3 ENSGALG00000040464 9045 0.869 - - 0.869 - - - - - - - striatin 3 [Source:HGNC Symbol;Acc:HGNC:15720]
41. RPL35 ENSGALG00000035677 252113 0.864 - - - - - - 0.864 - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
42. EXO1 ENSGALG00000010748 7572 0.863 - - - - - - 0.863 - - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
43. MAP3K7 ENSGALG00000015596 15164 0.863 - - - - - - 0.863 - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
44. NXT2 ENSGALG00000008092 2477 0.862 - - 0.862 - - - - - - - nuclear transport factor 2 like export factor 2 [Source:NCBI gene;Acc:422346]
45. ENSGALG00000012158 ENSGALG00000012158 11937 0.861 - - 0.861 - - - - - - -
46. CPSF6 ENSGALG00000019355 7634 0.861 - - - - - - 0.861 - - - cleavage and polyadenylation specific factor 6 [Source:NCBI gene;Acc:417844]
47. MRPL54 ENSGALG00000027611 39450 0.86 - - - - - - 0.860 - - - mitochondrial ribosomal protein L54 [Source:HGNC Symbol;Acc:HGNC:16685]
48. NEK6 ENSGALG00000001118 20333 0.859 - - - - - - 0.859 - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
49. GNL3 ENSGALG00000001613 10911 0.859 - - - - - - 0.859 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
50. PDHA1 ENSGALG00000016430 7070 0.859 - - - - - - 0.859 - - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
51. SKP2 ENSGALG00000003547 14637 0.859 - - - - - - 0.859 - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
52. MAP1B ENSGALG00000014999 6288 0.857 - - 0.857 - - - - - - - microtubule associated protein 1B
53. ACBD6 ACBD6 4293 0.857 - - 0.857 - - - - - - -
54. VBP1 VBP1 14482 0.855 - - - - - - 0.855 - - -
55. EIF4A2 ENSGALG00000008684 58507 0.855 - - - - - - 0.855 - - - eukaryotic translation initiation factor 4A2 [Source:NCBI gene;Acc:395232]
56. ARPC1A ENSGALG00000004693 11583 0.854 - - - - - - 0.854 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
57. RANBP1 ENSGALG00000002107 17715 0.854 - - - - - - 0.854 - - - RAN binding protein 1 [Source:NCBI gene;Acc:416787]
58. RAB34 ENSGALG00000026315 1193 0.853 - - 0.853 - - - - - - - RAB34, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16519]
59. LOC776067 ENSGALG00000016808 9164 0.85 - - - - - - 0.850 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
60. RAD23B ENSGALG00000015540 10828 0.85 - - - - - - 0.850 - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
61. KDELR2 ENSGALG00000040793 29669 0.848 - - - - - - 0.848 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
62. EIF2B EIF2B 28702 0.848 - - - - - - 0.848 - - -
63. RPL7L1 ENSGALG00000011974 20292 0.847 - - - - - - 0.847 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
64. TMPO ENSGALG00000011504 14454 0.846 - - - - - - 0.846 - - - thymopoietin [Source:NCBI gene;Acc:417923]
65. SLC9A3R2 ENSGALG00000005608 4220 0.846 - - 0.846 - - - - - - - SLC9A3 regulator 2 [Source:HGNC Symbol;Acc:HGNC:11076]
66. MEMO1 ENSGALG00000010624 6722 0.844 - - - - - - 0.844 - - - mediator of cell motility 1 [Source:NCBI gene;Acc:421483]
67. PRCC ENSGALG00000040696 9346 0.843 - - - - - - 0.843 - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
68. SPCS3 ENSGALG00000010839 19106 0.843 - - - - - - 0.843 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
69. UBE2G2 ENSGALG00000005667 12689 0.842 - - - - - - 0.842 - - - ubiquitin conjugating enzyme E2 G2 [Source:NCBI gene;Acc:424837]
70. FAM207A ENSGALG00000007513 8748 0.842 - - - - - - 0.842 - - - family with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]
71. METAP2 ENSGALG00000011377 16311 0.84 - - - - - - 0.840 - - - methionyl aminopeptidase 2 [Source:NCBI gene;Acc:417912]
72. TPD52L2 ENSGALG00000004683 13624 0.84 - - - - - - 0.840 - - - tumor protein D52 like 2 [Source:NCBI gene;Acc:419257]
73. BET1L ENSGALG00000004172 5305 0.839 - - - - - - 0.839 - - - Bet1 golgi vesicular membrane trafficking protein like [Source:NCBI gene;Acc:422985]
74. PSMC3 ENSGALG00000008108 22922 0.839 - - - - - - 0.839 - - - proteasome 26S subunit, ATPase 3 [Source:NCBI gene;Acc:423182]
75. FAM171B ENSGALG00000002646 837 0.839 - - 0.839 - - - - - - - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
76. NXN 20202 0.839 - - - - - - 0.839 - - - nucleoredoxin, transcript variant X1
77. VPS35 ENSGALG00000004375 8059 0.838 - - - - - - 0.838 - - - VPS35, retromer complex component [Source:NCBI gene;Acc:415750]
78. CEP78 ENSGALG00000015179 5227 0.836 - - - - - - 0.836 - - - centrosomal protein 78 [Source:HGNC Symbol;Acc:HGNC:25740]
79. SNRNP40 ENSGALG00000000615 32298 0.835 - - - - - - 0.835 - - - small nuclear ribonucleoprotein U5 subunit 40 [Source:NCBI gene;Acc:419556]
80. ILF2 ENSGALG00000011570 23050 0.835 - - - - - - 0.835 - - - interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]
81. IGBP1 ENSGALG00000044628 9200 0.834 - - - - - - 0.834 - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
82. SLC25A3 ENSGALG00000011514 62606 0.833 - - - - - - 0.833 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
83. RUVBL1 ENSGALG00000005931 9379 0.833 - - - - - - 0.833 - - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
84. CAP1 ENSGALG00000036294 18598 0.833 - - - - - - 0.833 - - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
85. ENSGALG00000004032 ENSGALG00000004032 2010 0.832 - - 0.832 - - - - - - -
86. YWHAZ ENSGALG00000031387 84985 0.832 - - - - - - 0.832 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta [Source:NCBI gene;Acc:425619]
87. PARP1 ENSGALG00000009228 39433 0.832 - - - - - - 0.832 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
88. PPP1R2 ENSGALG00000029789 11594 0.832 - - - - - - 0.832 - - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
89. UBE2F ENSGALG00000003812 13874 0.832 - - - - - - 0.832 - - - ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
90. LEPROT ENSGALG00000011047 7132 0.832 - - - - - - 0.832 - - - leptin receptor overlapping transcript [Source:NCBI gene;Acc:424699]
91. AES ENSGALG00000029503 17676 0.832 - - - - - - 0.832 - - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
92. EHD3 ENSGALG00000009086 14407 0.831 - - - - - - 0.831 - - - EH domain containing 3 [Source:NCBI gene;Acc:421306]
93. SMU1 ENSGALG00000002014 8136 0.831 - - - - - - 0.831 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]
94. SCP2 ENSGALG00000010652 19563 0.831 - - - - - - 0.831 - - - sterol carrier protein 2 [Source:NCBI gene;Acc:396550]
95. EVL ENSGALG00000011209 5440 0.831 - - - - - - 0.831 - - - Enah/Vasp-like [Source:NCBI gene;Acc:423453]
96. NDUFAB1 ENSGALG00000006073 40467 0.83 - - - - - - 0.830 - - - NADH:ubiquinone oxidoreductase subunit AB1 [Source:HGNC Symbol;Acc:HGNC:7694]
97. CHMP5 ENSGALG00000013160 13347 0.829 - - - - - - 0.829 - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
98. MRPS17 ENSGALG00000002379 30243 0.828 - - - - - - 0.828 - - - mitochondrial ribosomal protein S17 [Source:NCBI gene;Acc:417538]
99. AP2A2 ENSGALG00000006799 13874 0.828 - - - - - - 0.828 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
100. TMEM70 ENSGALG00000033568 10720 0.827 - - - - - - 0.827 - - - transmembrane protein 70 [Source:NCBI gene;Acc:420188]

There are 748 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA