Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UPP1

Gene Name Gene ID Reads Annotation
UPP1 ENSGALG00000013073 868 uridine phosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12576]











Genes with expression patterns similar to UPP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UPP1 ENSGALG00000013073 868 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 uridine phosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12576]
2. ELK3 ENSGALG00000043701 7881 0.839 - - - - - - 0.839 - - - ELK3, ETS transcription factor [Source:NCBI gene;Acc:417919]
3. GMPPB ENSGALG00000002500 9454 0.832 - - - - - - 0.832 - - - GDP-mannose pyrophosphorylase B [Source:NCBI gene;Acc:415924]
4. EED ENSGALG00000014060 6467 0.827 - - - - - - 0.827 - - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
5. FAM63B 3793 0.821 - - - - - - 0.821 - - - family with sequence similarity 63 member B
6. HOXA5 ENSGALG00000025929 6231 0.813 - - - - - - 0.813 - - - homeobox A5 [Source:NCBI gene;Acc:100858404]
7. BARX2B BARX2B 1983 0.786 - - - - - - - 0.786 - -
8. PTTG1 17936 0.783 - - - - - - 0.783 - - - pituitary tumor-transforming 1, transcript variant X1
9. FAM98A ENSGALG00000010428 9585 0.781 - - - - - - 0.781 - - - family with sequence similarity 98 member A [Source:NCBI gene;Acc:421458]
10. SNAI2 ENSGALG00000030902 8201 0.779 - - - - - - 0.779 - - - snail family transcriptional repressor 2
11. DCAF7 ENSGALG00000000510 8681 0.776 - - - - - - 0.776 - - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
12. KIAA0020 KIAA0020 14353 0.775 - - - - - - 0.775 - - -
13. LAPTM4A ENSGALG00000016479 15973 0.775 - - - - - - 0.775 - - - lysosomal protein transmembrane 4 alpha [Source:NCBI gene;Acc:421959]
14. SOCS5 ENSGALG00000010016 1134 0.773 - - - - - - 0.773 - - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
15. SALL4 ENSGALG00000041365 6760 0.768 - - - - - - 0.768 - - - spalt like transcription factor 4 [Source:NCBI gene;Acc:769286]
16. OSTC ENSGALG00000010526 19422 0.767 - - - - - - 0.767 - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
17. RTCB ENSGALG00000012611 14360 0.764 - - - - - - 0.764 - - - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
18. DNM1L ENSGALG00000012929 6174 0.762 - - - - - - 0.762 - - - dynamin 1 like [Source:NCBI gene;Acc:418132]
19. SH3GLB1 ENSGALG00000006284 12764 0.761 - - - - - - 0.761 - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
20. PREP ENSGALG00000015405 17050 0.761 - - - - - - 0.761 - - - prolyl endopeptidase [Source:NCBI gene;Acc:421785]
21. GPC4 ENSGALG00000006080 56498 0.76 - - - - - - 0.760 - - - glypican 4 [Source:HGNC Symbol;Acc:HGNC:4452]
22. DLD ENSGALG00000007931 11011 0.76 - - - - - - 0.760 - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
23. C12ORF57 C12ORF57 25906 0.759 - - - - - - 0.759 - - -
24. CALML4 ENSGALG00000007979 6395 0.758 - - - - - - 0.758 - - - calmodulin like 4 [Source:NCBI gene;Acc:427515]
25. TMEM167A ENSGALG00000027332 13862 0.757 - - - - - - 0.757 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
26. C4H4ORF52 C4H4ORF52 8116 0.756 - - - - - - 0.756 - - -
27. SP3 ENSGALG00000031796 8997 0.756 - - - - - - 0.756 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
28. LMAN2 ENSGALG00000033232 11740 0.755 - - - - - - 0.755 - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
29. CENPP ENSGALG00000004687 6707 0.754 - - - - - - 0.754 - - - centromere protein P [Source:NCBI gene;Acc:415952]
30. INCENP ENSGALG00000007537 16617 0.754 - - - - - - 0.754 - - - inner centromere protein [Source:NCBI gene;Acc:396270]
31. TTC37 ENSGALG00000014670 5715 0.754 - - - - - - 0.754 - - - tetratricopeptide repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:23639]
32. MCFD2 ENSGALG00000010017 8905 0.753 - - - - - - 0.753 - - - multiple coagulation factor deficiency 2 [Source:NCBI gene;Acc:421413]
33. RRP1B ENSGALG00000035696 12309 0.751 - - - - - - 0.751 - - - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
34. TFDP1 ENSGALG00000016823 17019 0.75 - - - - - - 0.750 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
35. NDRG1 ENSGALG00000035397 4021 0.748 - - - - - - 0.748 - - - N-myc downstream regulated 1 [Source:HGNC Symbol;Acc:HGNC:7679]
36. SDHD ENSGALG00000007878 25129 0.748 - - - - - - 0.748 - - - succinate dehydrogenase complex subunit D [Source:NCBI gene;Acc:419793]
37. NASP ENSGALG00000010255 28423 0.745 - - - - - - 0.745 - - - nuclear autoantigenic sperm protein, transcript variant X3
38. ITGB1 ENSGALG00000007145 19551 0.745 - - - - - - 0.745 - - - integrin subunit beta 1 [Source:NCBI gene;Acc:374058]
39. MRPS2 ENSGALG00000026303 12124 0.743 - - - - - - 0.743 - - - mitochondrial ribosomal protein S2 [Source:HGNC Symbol;Acc:HGNC:14495]
40. BLM ENSGALG00000008256 6160 0.743 - - - - - - 0.743 - - - Bloom syndrome RecQ like helicase [Source:NCBI gene;Acc:415577]
41. USP6NL ENSGALG00000035563 2202 0.742 - - - - - - 0.742 - - - USP6 N-terminal like [Source:NCBI gene;Acc:419104]
42. SYAP1 ENSGALG00000016548 3347 0.742 - - - - - - 0.742 - - - synapse associated protein 1 [Source:NCBI gene;Acc:418619]
43. DERL1 ENSGALG00000033950 15074 0.741 - - - - - - 0.741 - - - derlin 1 [Source:NCBI gene;Acc:420350]
44. SEC23A_1 ENSGALG00000010150 14745 0.741 - - - - - - 0.741 - - - Sec23 homolog A, coat complex II component [Source:HGNC Symbol;Acc:HGNC:10701]
45. MYO5A ENSGALG00000031987 2469 0.74 - - - - - - 0.740 - - - myosin VA [Source:NCBI gene;Acc:396237]
46. GSTK1 ENSGALG00000014708 4687 0.74 - - - - - - 0.740 - - - glutathione S-transferase kappa 1 [Source:NCBI gene;Acc:418302]
47. MDM2 ENSGALG00000009942 397 0.739 - - - - - - - 0.739 - - MDM2 proto-oncogene [Source:NCBI gene;Acc:395609]
48. MLST8 ENSGALG00000005878 8116 0.738 - - - - - - 0.738 - - - MTOR associated protein, LST8 homolog [Source:HGNC Symbol;Acc:HGNC:24825]
49. ENOX2 ENSGALG00000004079 4055 0.738 - - - - - - 0.738 - - - ecto-NOX disulfide-thiol exchanger 2 [Source:NCBI gene;Acc:422142]
50. KIAA1551 ENSGALG00000045168 3435 0.737 - - - - - - 0.737 - - - KIAA1551, transcript variant X1
51. WDR51B WDR51B 5757 0.737 - - - - - - 0.737 - - -
52. EGFL7 ENSGALG00000043499 6272 0.736 - - - - - - 0.736 - - - EGF like domain multiple 7 [Source:NCBI gene;Acc:417137]
53. HMGN3 ENSGALG00000015880 30919 0.736 - - - - - - 0.736 - - - high mobility group nucleosomal binding domain 3 [Source:NCBI gene;Acc:421853]
54. MRPL47 ENSGALG00000013759 9044 0.736 - - - - - - 0.736 - - - mitochondrial ribosomal protein L47 [Source:HGNC Symbol;Acc:HGNC:16652]
55. FRAS1 ENSGALG00000010316 5008 0.736 - - - - - - 0.736 - - - Fraser extracellular matrix complex subunit 1, transcript variant X2
56. XRCC5 ENSGALG00000011492 6802 0.736 - - - - - - 0.736 - - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
57. CRIPT ENSGALG00000010014 4311 0.735 - - - - - - 0.735 - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
58. WDR45B ENSGALG00000001563 5870 0.733 - - - - - - 0.733 - - - WD repeat domain 45B [Source:NCBI gene;Acc:417339]
59. UTP11L UTP11L 11927 0.733 - - - - - - 0.733 - - -
60. HOXA3 ENSGALG00000027925 4287 0.732 - - - - - - 0.732 - - - homeobox A3 [Source:HGNC Symbol;Acc:HGNC:5104]
61. EHMT1 ENSGALG00000033678 5720 0.732 - - - - - - 0.732 - - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
62. HSPA4 ENSGALG00000040882 20966 0.731 - - - - - - 0.731 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
63. C6ORF162 C6ORF162 4217 0.731 - - - - - - 0.731 - - -
64. SACS ENSGALG00000017120 4906 0.73 - - - - - - 0.730 - - - sacsin molecular chaperone [Source:HGNC Symbol;Acc:HGNC:10519]
65. ABHD17B ENSGALG00000015139 2805 0.73 - - - - - - 0.730 - - - abhydrolase domain containing 17B [Source:NCBI gene;Acc:427252]
66. SLC30A5 ENSGALG00000014787 5573 0.728 - - - - - - 0.728 - - - solute carrier family 30 member 5 [Source:NCBI gene;Acc:427173]
67. SMC4 ENSGALG00000009553 15715 0.727 - - - - - - 0.727 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
68. DNAJC3 ENSGALG00000016894 9048 0.727 - - - - - - 0.727 - - - DnaJ heat shock protein family (Hsp40) member C3 [Source:NCBI gene;Acc:418787]
69. ENSGALG00000017324 ENSGALG00000017324 8235 0.726 - - - - - - 0.726 - - -
70. SART3 ENSGALG00000039472 4948 0.726 - - - - - - 0.726 - - - squamous cell carcinoma antigen recognized by T cells 3 [Source:HGNC Symbol;Acc:HGNC:16860]
71. MTRF1 ENSGALG00000016951 3983 0.726 - - - - - - 0.726 - - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
72. NCDN ENSGALG00000002408 6180 0.725 - - - - - - 0.725 - - - neurochondrin [Source:NCBI gene;Acc:419633]
73. EGLN1 ENSGALG00000041422 11032 0.725 - - - - - - 0.725 - - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
74. ODF2 ENSGALG00000004767 3972 0.725 - - - - - - 0.725 - - - outer dense fiber of sperm tails 2 [Source:NCBI gene;Acc:417213]
75. IGF2BP2 ENSGALG00000033195 11421 0.725 - - - - - - 0.725 - - - insulin like growth factor 2 mRNA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28867]
76. R3HDM1 ENSGALG00000012246 6580 0.724 - - - - - - 0.724 - - - R3H domain containing 1 [Source:HGNC Symbol;Acc:HGNC:9757]
77. SLC2A8 ENSGALG00000000853 1119 0.723 - - - - - - - 0.723 - - solute carrier family 2 member 8 [Source:NCBI gene;Acc:378802]
78. PCNT ENSGALG00000007021 6428 0.723 - - - - - - 0.723 - - - pericentrin [Source:HGNC Symbol;Acc:HGNC:16068]
79. CYC CYC 8740 0.722 - - - - - - 0.722 - - -
80. GTLF3B GTLF3B 5079 0.722 - - - - - - 0.722 - - -
81. CLNS1A ENSGALG00000008574 25675 0.722 - - - - - - 0.722 - - - chloride nucleotide-sensitive channel 1A [Source:HGNC Symbol;Acc:HGNC:2080]
82. PAN3 ENSGALG00000017092 5387 0.721 - - - - - - 0.721 - - - poly(A) specific ribonuclease subunit PAN3 [Source:HGNC Symbol;Acc:HGNC:29991]
83. ZRANB1 ENSGALG00000031474 3909 0.721 - - - - - - 0.721 - - - zinc finger RANBP2-type containing 1 [Source:HGNC Symbol;Acc:HGNC:18224]
84. UBE2B ENSGALG00000032664 6069 0.718 - - - - - - 0.718 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
85. GABARAPL2 ENSGALG00000003208 9195 0.718 - - - - - - 0.718 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
86. SECISBP2 ENSGALG00000010694 6990 0.717 - - - - - - 0.717 - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
87. CYB5B ENSGALG00000000660 9733 0.717 - - - - - - 0.717 - - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
88. RPAP3 ENSGALG00000009743 3380 0.717 - - - - - - 0.717 - - - RNA polymerase II associated protein 3 [Source:NCBI gene;Acc:417811]
89. RSL1D1 ENSGALG00000033690 13638 0.716 - - - - - - 0.716 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
90. AP2A2 ENSGALG00000006799 13874 0.716 - - - - - - 0.716 - - - adaptor related protein complex 2 subunit alpha 2 [Source:NCBI gene;Acc:423102]
91. TMX3 ENSGALG00000013757 6387 0.716 - - - - - - 0.716 - - - Gallus gallus thioredoxin related transmembrane protein 3 (TMX3), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001321606]
92. SCAF4 ENSGALG00000033965 2027 0.715 - - - - - - - 0.715 - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
93. WBSCR27 3511 0.715 - - - - - - 0.715 - - - Williams Beuren syndrome chromosome region 27
94. CKAP5 ENSGALG00000008325 8494 0.714 - - - - - - 0.714 - - - cytoskeleton associated protein 5 [Source:NCBI gene;Acc:423190]
95. KXD1 ENSGALG00000036736 3771 0.714 - - - - - - 0.714 - - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
96. DGCR6 ENSGALG00000027369 7882 0.713 - - - - - - 0.713 - - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
97. TLN2 2295 0.713 - - - - - - 0.713 - - - talin 2, transcript variant X5
98. SUCLG2 ENSGALG00000007652 9688 0.713 - - - - - - 0.713 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
99. KIF11 ENSGALG00000030597 5528 0.713 - - - - - - 0.713 - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
100. SEC24C ENSGALG00000005181 11132 0.713 - - - - - - 0.713 - - - SEC24 homolog C, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10705]

There are 28 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA