Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UPK3A

Gene Name Gene ID Reads Annotation
UPK3A ENSGALG00000014227 7 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]











Genes with expression patterns similar to UPK3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UPK3A ENSGALG00000014227 7 6 - - - 1.000 1.000 1.000 1.000 1.000 - 1.000 uroplakin 3A [Source:HGNC Symbol;Acc:HGNC:12580]
2. ENSGALG00000026501 ENSGALG00000026501 39 2 - - - - - - - 1.000 - 1.000
3. LEPR ENSGALG00000011058 4 2 - - - - 1.000 1.000 - - - - leptin receptor [Source:NCBI gene;Acc:374223]
4. BDKRB2 ENSGALG00000011080 12 1.923 - - - 1.000 - 0.923 - - - - bradykinin receptor B2 [Source:NCBI gene;Acc:428906]
5. CMTR1 ENSGALG00000010149 12 1.913 - - - - - - - 1.000 - 0.913 cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
6. LRCH1 ENSGALG00000016990 17 1.868 - - - - - 1.000 0.868 - - - leucine rich repeats and calponin homology domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20309]
7. PCDH15 ENSGALG00000002744 34 1.774 - - - - - - 0.898 0.876 - - protocadherin related 15 [Source:NCBI gene;Acc:423644]
8. FGF23 ENSGALG00000027791 9 1.728 - - - 0.728 - 1.000 - - - - fibroblast growth factor 23 [Source:HGNC Symbol;Acc:HGNC:3680]
9. COL9A3 ENSGALG00000005628 2842 1.682 - - - - - 0.876 - 0.806 - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
10. WASF2 ENSGALG00000014012 30 1.663 - - - - 0.865 - - - - 0.798 WAS protein family member 2 [Source:HGNC Symbol;Acc:HGNC:12733]
11. TIMP3 ENSGALG00000028627 8706 1.549 - - - - - 0.813 - 0.736 - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
12. TFPI2 ENSGALG00000009512 84 1.541 - - - - - - 0.723 0.818 - - tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]
13. FAM199X ENSGALG00000008872 44 1.455 - - - - - - 0.702 0.753 - - family with sequence similarity 199, X-linked [Source:HGNC Symbol;Acc:HGNC:25195]
14. LPGAT1 ENSGALG00000009848 33 1 - - - - - - - 1.000 - - lysophosphatidylglycerol acyltransferase 1 [Source:NCBI gene;Acc:421375]
15. HHATL ENSGALG00000005297 0 1 - - - - - 1.000 - - - - hedgehog acyltransferase-like [Source:NCBI gene;Acc:420391]
16. ENSGALG00000000443 ENSGALG00000000443 2 1 - - - - - - - - - 1.000
17. SLC17A8 ENSGALG00000041122 57 1 - - - - - - - 1.000 - - Gallus gallus solute carrier family 17 member 8 (SLC17A8), mRNA. [Source:RefSeq mRNA;Acc:NM_001319029]
18. NLRC3 ENSGALG00000033278 11 1 - - - - - 1.000 - - - - NLR family CARD domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29889]
19. NFIL3 ENSGALG00000015209 15 1 - - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated [Source:NCBI gene;Acc:395326]
20. HOXA1 ENSGALG00000028095 137 1 - - - - - - - - - 1.000 homeobox A1 [Source:HGNC Symbol;Acc:HGNC:5099]
21. ADAMTSL2 ENSGALG00000002955 5 1 - - - - - - 1.000 - - - ADAMTS like 2 [Source:HGNC Symbol;Acc:HGNC:14631]
22. OLFM4 ENSGALG00000016943 7 1 - - - - - - - 1.000 - - olfactomedin 4 [Source:NCBI gene;Acc:418826]
23. RNF215 ENSGALG00000040925 19 1 - - - - - - - 1.000 - - ring finger protein 215 [Source:HGNC Symbol;Acc:HGNC:33434]
24. PKD1 ENSGALG00000005714 0 1 - - - - - 1.000 - - - - polycystin 1, transient receptor potential channel interacting [Source:HGNC Symbol;Acc:HGNC:9008]
25. PABPN1L ENSGALG00000006242 3 1 - - - - - - - 1.000 - - poly(A) binding protein nuclear 1 like, cytoplasmic [Source:HGNC Symbol;Acc:HGNC:37237]
26. ARHGAP44 ENSGALG00000001311 0 1 - - - - - 1.000 - - - - Rho GTPase activating protein 44, transcript variant X4
27. KIAA1841 ENSGALG00000007825 22 1 - - - - - 1.000 - - - - KIAA1841 [Source:NCBI gene;Acc:421196]
28. SLC13A5 ENSGALG00000005995 23 1 - - - - - 1.000 - - - - solute carrier family 13 member 5 [Source:HGNC Symbol;Acc:HGNC:23089]
29. GIPC2 ENSGALG00000008902 6 1 - - - - - - - 1.000 - - GIPC PDZ domain containing family member 2 [Source:HGNC Symbol;Acc:HGNC:18177]
30. C17orf105 C17orf105 11 1 - - - - - - - 1.000 - -
31. CRIP2 ENSGALG00000026471 4 1 - - - - - - - 1.000 - - cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]
32. KCNA4 ENSGALG00000012142 6 1 - - - - - - - - - 1.000 potassium voltage-gated channel subfamily A member 4 [Source:NCBI gene;Acc:395721]
33. IL16 ENSGALG00000006388 3 1 - - - - - - - - - 1.000 interleukin 16 [Source:NCBI gene;Acc:374270]
34. GDA ENSGALG00000015141 21 1 - - - - - - - - - 1.000 guanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]
35. FGF16 ENSGALG00000007806 8 1 - - - - - - - - - 1.000 fibroblast growth factor 16 [Source:NCBI gene;Acc:422330]
36. VIL1 ENSGALG00000037286 5 1 - - - - - - - 1.000 - - villin 1 [Source:NCBI gene;Acc:396423]
37. ABHD14A 174 1 - - - - - - - 1.000 - - abhydrolase domain containing 14A
38. SH3BP4 ENSGALG00000004140 4 1 - - - - - - - 1.000 - - SH3 domain binding protein 4 [Source:HGNC Symbol;Acc:HGNC:10826]
39. FNIP1 ENSGALG00000017462 4 1 - - - - - - - 1.000 - - folliculin interacting protein 1 [Source:NCBI gene;Acc:427642]
40. PDCL2 ENSGALG00000013783 9 1 - - - - - - - - - 1.000 phosducin like 2 [Source:HGNC Symbol;Acc:HGNC:29524]
41. PLCD3 ENSGALG00000045212 5 1 - - - - 1.000 - - - - - phospholipase C delta 3 [Source:HGNC Symbol;Acc:HGNC:9061]
42. OPN4-1 ENSGALG00000041662 10 1 - - - - - - - - - 1.000 photopigment melanopsin-like [Source:NCBI gene;Acc:395334]
43. BTBD17 ENSGALG00000023359 87 1 - - - - - - - 1.000 - - BTB domain containing 17 [Source:HGNC Symbol;Acc:HGNC:33758]
44. IBSP ENSGALG00000010928 1 1 - - - - 1.000 - - - - - integrin binding sialoprotein [Source:NCBI gene;Acc:396071]
45. LYG2 ENSGALG00000016761 7 1 - - - 1.000 - - - - - - lysozyme g2 [Source:NCBI gene;Acc:395708]
46. BLB1 ENSGALG00000000141 13 1 - - - - 1.000 - - - - - Major histocompatibility complex class II beta chain BLB1 [Source:NCBI gene;Acc:693256]
47. LRRC47 7 1 - - - - - - - - - 1.000 leucine rich repeat containing 47
48. NRAP ENSGALG00000008914 24 1 - - - - - 1.000 - - - - nebulin related anchoring protein [Source:HGNC Symbol;Acc:HGNC:7988]
49. SCN3A ENSGALG00000011040 62 1 - - - - - - - 1.000 - - sodium voltage-gated channel alpha subunit 3 [Source:HGNC Symbol;Acc:HGNC:10590]
50. UNC13B ENSGALG00000002165 3 1 - - - - - 1.000 - - - - unc-13 homolog B [Source:HGNC Symbol;Acc:HGNC:12566]
51. PABPC1L ENSGALG00000004123 2 1 - - - - - 1.000 - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
52. ECT2 ENSGALG00000009157 31 1 - - - - - - - 1.000 - - epithelial cell transforming 2, transcript variant X7
53. ENSGALG00000025736 ENSGALG00000025736 3 1 - - - - - 1.000 - - - -
54. CALR3 ENSGALG00000003914 8 1 - - - - - 1.000 - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
55. ENSGALG00000014141 ENSGALG00000014141 3 1 - - - - 1.000 - - - - -
56. TOR1BL ENSGALG00000023709 1 1 - - - - - - - 1.000 - - torsin family 1, member B-like [Source:NCBI gene;Acc:417192]
57. ENSGALG00000027597 ENSGALG00000027597 13 1 - - - - - - - - - 1.000
58. DD1 DD1 4 1 - - - - - 1.000 - - - -
59. ABCB1LB ABCB1LB 4 1 - - - - - - - - - 1.000
60. CECR2 ENSGALG00000013034 12 1 - - - - - - - - - 1.000 CECR2, histone acetyl-lysine reader [Source:NCBI gene;Acc:418161]
61. U5 U5 1 1 - - - - - 1.000 - - - -
62. ENSGALG00000004753 ENSGALG00000004753 63 1 - - - - - 1.000 - - - -
63. GPR174 ENSGALG00000004111 16 1 - - - - - 1.000 - - - - G protein-coupled receptor 174 [Source:NCBI gene;Acc:422146]
64. MAVS ENSGALG00000040428 1 1 - - - - - - - 1.000 - - mitochondrial antiviral signaling protein [Source:NCBI gene;Acc:422936]
65. FAM131B ENSGALG00000014689 1 1 - - - - 1.000 - - - - - family with sequence similarity 131 member B [Source:HGNC Symbol;Acc:HGNC:22202]
66. SNAPC1 ENSGALG00000011868 65 1 - - - - - - - 1.000 - - small nuclear RNA activating complex polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:11134]
67. KCNH4 ENSGALG00000003354 0 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily H member 4 [Source:HGNC Symbol;Acc:HGNC:6253]
68. ENSGALG00000028428 ENSGALG00000028428 3 1 - - - - - - - 1.000 - -
69. ENSGALG00000020661 ENSGALG00000020661 1 1 - - - - - 1.000 - - - -
70. VTG1 ENSGALG00000039354 17 1 - - - - - - - - - 1.000 vitellogenin 1 [Source:NCBI gene;Acc:424547]
71. FGG ENSGALG00000009268 418 1 - - - - - - 1.000 - - - fibrinogen gamma chain [Source:NCBI gene;Acc:395837]
72. DDO ENSGALG00000015057 25 1 - - - - - - - - - 1.000 D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
73. EVI2A ENSGALG00000039084 13 1 - - - - - 1.000 - - - - ecotropic viral integration site 2A [Source:NCBI gene;Acc:776037]
74. LZTS3 ENSGALG00000016001 3 1 - - - - - 1.000 - - - - leucine zipper tumor suppressor family member 3 [Source:HGNC Symbol;Acc:HGNC:30139]
75. TMC3 ENSGALG00000006376 12 1 - - - - - - - - - 1.000 transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
76. F13B ENSGALG00000002369 1 1 - - - - - - - 1.000 - - coagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]
77. ENSGALG00000009041 ENSGALG00000009041 27 1 - - - - - 1.000 - - - -
78. SLC6A6 ENSGALG00000006425 31 1 - - - - 1.000 - - - - - solute carrier family 6 member 6 [Source:NCBI gene;Acc:416041]
79. SNORD61 SNORD61 12 1 - - - - - - - - - 1.000
80. CELSR1 ENSGALG00000043355 19 1 - - - - - - - 1.000 - - cadherin EGF LAG seven-pass G-type receptor 1 [Source:HGNC Symbol;Acc:HGNC:1850]
81. gga-mir-22 ENSGALG00000024507 2 1 - - - - - 1.000 - - - - gga-mir-22 [Source:miRBase;Acc:MI0006982]
82. SH2D4B ENSGALG00000002370 10 1 - - - - 1.000 - - - - - SH2 domain containing 4B [Source:HGNC Symbol;Acc:HGNC:31440]
83. C18H17ORF67 ENSGALG00000024428 10 1 - - - - - - - - - 1.000 chromosome 18 open reading frame, human C17orf67 [Source:NCBI gene;Acc:417400]
84. CRYBG3 7 1 - - - - 1.000 - - - - - crystallin beta-gamma domain containing 3, transcript variant X2
85. PLEKHG7 ENSGALG00000011277 3 1 - - - - - 1.000 - - - - pleckstrin homology and RhoGEF domain containing G7 [Source:HGNC Symbol;Acc:HGNC:33829]
86. U2 U2 89 1 - - - - - - 1.000 - - -
87. C11ORF61 C11ORF61 41 1 - - - - - - - 1.000 - -
88. SLC35A3 12 1 - - - - - - - 1.000 - - solute carrier family 35 member A3, transcript variant X7
89. NID1 ENSGALG00000042079 89 1 - - - - - - 1.000 - - - nidogen 1 [Source:HGNC Symbol;Acc:HGNC:7821]
90. GPR183 ENSGALG00000016881 5 1 - - - - - - - 1.000 - - G protein-coupled receptor 183 [Source:HGNC Symbol;Acc:HGNC:3128]
91. IL8 ENSGALG00000026098 16 1 - - - - - 1.000 - - - - interleukin 8-like 2 [Source:NCBI gene;Acc:396495]
92. AGO2 ENSGALG00000040957 25 1 - - - - - 1.000 - - - - argonaute 2, RISC catalytic component [Source:HGNC Symbol;Acc:HGNC:3263]
93. ISM2 ENSGALG00000010468 1 1 - - - - - - - - - 1.000 isthmin 2, transcript variant X2
94. RAP2A ENSGALG00000016889 26 1 - - - - - - - - - 1.000 RAP2A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9861]
95. CD40 ENSGALG00000007015 7 1 - - - - - - - - - 1.000 CD40 molecule [Source:NCBI gene;Acc:395385]
96. RAB3GAP2 ENSGALG00000009503 36 1 - - - - - - 1.000 - - - RAB3 GTPase activating non-catalytic protein subunit 2 [Source:NCBI gene;Acc:421343]
97. ENSGALG00000018875 ENSGALG00000018875 6 1 - - - - - - - 1.000 - -
98. ARHGAP39 ENSGALG00000001536 15 1 - - - - - - - 1.000 - - Rho GTPase activating protein 39, transcript variant X2
99. NEGR1 ENSGALG00000011350 6 1 - - - - - 1.000 - - - - neuronal growth regulator 1 [Source:NCBI gene;Acc:395662]
100. MLH1 ENSGALG00000039169 19 1 - - - - - - - 1.000 - - mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]

There are 266 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA